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The map label for this gene is qseB [H]

Identifier: 83594517

GI number: 83594517

Start: 3676464

End: 3677153

Strand: Direct

Name: qseB [H]

Synonym: Rru_A3187

Alternate gene names: 83594517

Gene position: 3676464-3677153 (Clockwise)

Preceding gene: 83594516

Following gene: 83594518

Centisome position: 84.46

GC content: 67.1

Gene sequence:

>690_bases
TTGCGCGTGCTGTTGGTGGAAGACGAGCCAACCCTGGCCCTGACCCTGCGCCGCGTTCTTGAACGGGCGGGATTCGCCGT
CGATCTGGCCGATGATGGCGAGGAGGCTTTGTTCCTTGGGGAAACCGAACCCTTCGACGCCGTGGTCCTTGATCTTGGAT
TGCCCCGGCTTGACGGCATCGGCGTGCTGCGGCGCTGGCGCGCCGCCGGCATCGGCGTGCCGGTGCTGATCTTGACGGCG
CGCGGCGGCTGGCCGGAAAAGGTCGCCGGCTTCGAGGCCGGGGCCGATGACTACGTGACCAAACCCTTCGAGATGGAGGA
GGTGGTCTTGCGCCTGAAGGCGCTGATCCGCCGGGCGGCGGGCCATCCCTCGACCGAACTGGTGGCCGGACCCTTGCGCC
TGGATACCACTTCGGGGCGGGGCAGCGTCGAAGGCCGGCCGCTTGATCTGACCGCCCAGGAATACAAGATCCTGACCTAT
CTGCTGCTGCGCCAGGGGCAGACGGTAAGCCGCAGCGACATCGTCGACCACGTCTATGATCGCGACTCCGATCGCGATTC
CAACGTCATTGATGTGCTGGTCGGCCGCCTGCGCCGCAAGCTTGGCGCGCCGCTGATCCACACCGTGCGCGGTCTCGGCT
ATCGGCTGGAAGCCGAAAGCGCCCCCCCCGATCAAGGGGCGCTCCGCTGA

Upstream 100 bases:

>100_bases
TGAGATCACCCTTGTCAGCGCCGGCGGGCGGGTCACCCGCCTGGATTTCGACGCCGCCACCGGCGATCTGATCGCGCGCC
GCGACGGAAAGGATTAGCCC

Downstream 100 bases:

>100_bases
GACCGCCGCGCTCGCTGCGCCGCCGCCTGCTGGTCGCGGGCGGCTTGTGGTTGGCCGGCGCCCTGGCGGCGACCTATCTG
GTCATTTCCTATGCGGTGGC

Product: two component transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MRVLLVEDEPTLALTLRRVLERAGFAVDLADDGEEALFLGETEPFDAVVLDLGLPRLDGIGVLRRWRAAGIGVPVLILTA
RGGWPEKVAGFEAGADDYVTKPFEMEEVVLRLKALIRRAAGHPSTELVAGPLRLDTTSGRGSVEGRPLDLTAQEYKILTY
LLLRQGQTVSRSDIVDHVYDRDSDRDSNVIDVLVGRLRRKLGAPLIHTVRGLGYRLEAESAPPDQGALR

Sequences:

>Translated_229_residues
MRVLLVEDEPTLALTLRRVLERAGFAVDLADDGEEALFLGETEPFDAVVLDLGLPRLDGIGVLRRWRAAGIGVPVLILTA
RGGWPEKVAGFEAGADDYVTKPFEMEEVVLRLKALIRRAAGHPSTELVAGPLRLDTTSGRGSVEGRPLDLTAQEYKILTY
LLLRQGQTVSRSDIVDHVYDRDSDRDSNVIDVLVGRLRRKLGAPLIHTVRGLGYRLEAESAPPDQGALR
>Mature_229_residues
MRVLLVEDEPTLALTLRRVLERAGFAVDLADDGEEALFLGETEPFDAVVLDLGLPRLDGIGVLRRWRAAGIGVPVLILTA
RGGWPEKVAGFEAGADDYVTKPFEMEEVVLRLKALIRRAAGHPSTELVAGPLRLDTTSGRGSVEGRPLDLTAQEYKILTY
LLLRQGQTVSRSDIVDHVYDRDSDRDSNVIDVLVGRLRRKLGAPLIHTVRGLGYRLEAESAPPDQGALR

Specific function: Member of a two-component regulatory system qseB/qseC [H]

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1787375, Length=222, Percent_Identity=43.2432432432432, Blast_Score=171, Evalue=3e-44,
Organism=Escherichia coli, GI1789402, Length=219, Percent_Identity=43.37899543379, Blast_Score=164, Evalue=3e-42,
Organism=Escherichia coli, GI1786784, Length=223, Percent_Identity=40.3587443946188, Blast_Score=157, Evalue=8e-40,
Organism=Escherichia coli, GI1790552, Length=219, Percent_Identity=38.8127853881278, Blast_Score=145, Evalue=3e-36,
Organism=Escherichia coli, GI87082012, Length=222, Percent_Identity=34.2342342342342, Blast_Score=133, Evalue=1e-32,
Organism=Escherichia coli, GI1788394, Length=229, Percent_Identity=35.3711790393013, Blast_Score=122, Evalue=2e-29,
Organism=Escherichia coli, GI1786599, Length=223, Percent_Identity=35.4260089686099, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1790860, Length=221, Percent_Identity=36.6515837104072, Blast_Score=118, Evalue=3e-28,
Organism=Escherichia coli, GI1789809, Length=225, Percent_Identity=33.7777777777778, Blast_Score=114, Evalue=8e-27,
Organism=Escherichia coli, GI2367329, Length=234, Percent_Identity=35.042735042735, Blast_Score=108, Evalue=4e-25,
Organism=Escherichia coli, GI1787229, Length=226, Percent_Identity=31.4159292035398, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1786911, Length=227, Percent_Identity=33.4801762114537, Blast_Score=97, Evalue=8e-22,
Organism=Escherichia coli, GI1790863, Length=230, Percent_Identity=26.9565217391304, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1788550, Length=109, Percent_Identity=33.9449541284404, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1790437, Length=123, Percent_Identity=30.8943089430894, Blast_Score=67, Evalue=9e-13,
Organism=Escherichia coli, GI1790299, Length=120, Percent_Identity=30.8333333333333, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 25097; Mature: 25097

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVLLVEDEPTLALTLRRVLERAGFAVDLADDGEEALFLGETEPFDAVVLDLGLPRLDGI
CEEEEECCCCHHHHHHHHHHHHCCCEEEECCCCCCEEEECCCCCHHEEEEECCCCCCCHH
GVLRRWRAAGIGVPVLILTARGGWPEKVAGFEAGADDYVTKPFEMEEVVLRLKALIRRAA
HHHHHHHHCCCCCEEEEEEECCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
GHPSTELVAGPLRLDTTSGRGSVEGRPLDLTAQEYKILTYLLLRQGQTVSRSDIVDHVYD
CCCCHHEEECCEEEECCCCCCCCCCCCEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHC
RDSDRDSNVIDVLVGRLRRKLGAPLIHTVRGLGYRLEAESAPPDQGALR
CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCEEEECCCCCCCCCCCC
>Mature Secondary Structure
MRVLLVEDEPTLALTLRRVLERAGFAVDLADDGEEALFLGETEPFDAVVLDLGLPRLDGI
CEEEEECCCCHHHHHHHHHHHHCCCEEEECCCCCCEEEECCCCCHHEEEEECCCCCCCHH
GVLRRWRAAGIGVPVLILTARGGWPEKVAGFEAGADDYVTKPFEMEEVVLRLKALIRRAA
HHHHHHHHCCCCCEEEEEEECCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
GHPSTELVAGPLRLDTTSGRGSVEGRPLDLTAQEYKILTYLLLRQGQTVSRSDIVDHVYD
CCCCHHEEECCEEEECCCCCCCCCCCCEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHC
RDSDRDSNVIDVLVGRLRRKLGAPLIHTVRGLGYRLEAESAPPDQGALR
CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]