Click here to switch to the map view.

The map label for this gene is ntaR [H]

Identifier: 83594469

GI number: 83594469

Start: 3621254

End: 3622108

Strand: Reverse

Name: ntaR [H]

Synonym: Rru_A3139

Alternate gene names: 83594469

Gene position: 3622108-3621254 (Counterclockwise)

Preceding gene: 83594474

Following gene: 83594468

Centisome position: 83.21

GC content: 63.74

Gene sequence:

>855_bases
ATGCCAAATTTCACCCATAATCAAGCAATCCACGCAGGAGTTCGCCTCTTCTTCCGGCTCTGGCCTCGGGTCGAACGAAA
TGGCATATCAACGGCGATAGCAAACGGATGGGGCATGGCGGTGATCAAGACGGGCGATGATGGGGACCTTGGCGAGGACG
CGCGGTCCGGAGCGGCGGGGGAGGCGGGATCCGAGGCGGCTTGGGCTCCGGCCCTGTTGTCGCGGCAGATCGCCCAAACC
CTGCGGACAATGATCGCCACCGATGACCTTCCCCCCGGGGCCCGTCTGCGGGAAAGGACCCTGGCCGAGCGGTTGCAGGT
CTCGCGGACCCCGCTGCGCGAGGCGCTCAACATCCTGCGCGGCGATGGGCTGGTGACGCTCACTCCCAATCGCGGCGCGG
TGGTGACCGTGCTTTCAAGCGCCCAGGTCCAGGAAAAATTGGCGGTTCTGGGATTGATCGAGGGGTTTGGCGGCGAACTG
GCCTGTCAGAACGCCAGCGAGGACGAAATCGCCGAGATCCGCGCCCTGCATTATGATATGGCCGCCGCCTTCGAGCGCCG
CGACCGCGCCGTGTATTTTCGGACCAATCAGGCGATTCACCGCGCCATTCAGGTCGCCGCCCACAATACGACCCTTCTTG
AGGTCTTCGAGCAGATCAACCGACAGATTTATCGCTACCGCTATCAGGGTAGTCTAAACGCCCAAACGTGGCATACCGCC
CTGGCCGAGCACGAGGAGATCATCCGCCTGCTCAGCGCCCGGGCGGCCGAGGCGCTGGGCGCGCTGTTGCGCGCCCATGT
CCATAGCACCTGGGACAAGATCGATTGGGCCGCCCTCACTCCTGCGGTAAAGTAG

Upstream 100 bases:

>100_bases
TCCTGCCGAATATCCGGCTTTTTTATGGGGTTTCGTTGGGGCTCGCGGGTGTTTTTCCCCCGCTTGGTTCAGCCTCGGCG
AAAGGCGTGATTAATTTGGT

Downstream 100 bases:

>100_bases
GGGCCTGATTCGGGAGTGCTGGCCATCGCTGGCTCGGGCTCGCTGGGGTGCTGGGCAACCGGTGCGCGCCTGCGGCGTTG
ACGGCGGGTCGGGGCGGACT

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 283

Protein sequence:

>284_residues
MPNFTHNQAIHAGVRLFFRLWPRVERNGISTAIANGWGMAVIKTGDDGDLGEDARSGAAGEAGSEAAWAPALLSRQIAQT
LRTMIATDDLPPGARLRERTLAERLQVSRTPLREALNILRGDGLVTLTPNRGAVVTVLSSAQVQEKLAVLGLIEGFGGEL
ACQNASEDEIAEIRALHYDMAAAFERRDRAVYFRTNQAIHRAIQVAAHNTTLLEVFEQINRQIYRYRYQGSLNAQTWHTA
LAEHEEIIRLLSARAAEALGALLRAHVHSTWDKIDWAALTPAVK

Sequences:

>Translated_284_residues
MPNFTHNQAIHAGVRLFFRLWPRVERNGISTAIANGWGMAVIKTGDDGDLGEDARSGAAGEAGSEAAWAPALLSRQIAQT
LRTMIATDDLPPGARLRERTLAERLQVSRTPLREALNILRGDGLVTLTPNRGAVVTVLSSAQVQEKLAVLGLIEGFGGEL
ACQNASEDEIAEIRALHYDMAAAFERRDRAVYFRTNQAIHRAIQVAAHNTTLLEVFEQINRQIYRYRYQGSLNAQTWHTA
LAEHEEIIRLLSARAAEALGALLRAHVHSTWDKIDWAALTPAVK
>Mature_283_residues
PNFTHNQAIHAGVRLFFRLWPRVERNGISTAIANGWGMAVIKTGDDGDLGEDARSGAAGEAGSEAAWAPALLSRQIAQTL
RTMIATDDLPPGARLRERTLAERLQVSRTPLREALNILRGDGLVTLTPNRGAVVTVLSSAQVQEKLAVLGLIEGFGGELA
CQNASEDEIAEIRALHYDMAAAFERRDRAVYFRTNQAIHRAIQVAAHNTTLLEVFEQINRQIYRYRYQGSLNAQTWHTAL
AEHEEIIRLLSARAAEALGALLRAHVHSTWDKIDWAALTPAVK

Specific function: Probable regulator for the expression of the NTA monooxygenase subunits [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787821, Length=202, Percent_Identity=24.2574257425743, Blast_Score=65, Evalue=6e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 31271; Mature: 31140

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNFTHNQAIHAGVRLFFRLWPRVERNGISTAIANGWGMAVIKTGDDGDLGEDARSGAAG
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEEEEECCCCCCCCHHHCCCCC
EAGSEAAWAPALLSRQIAQTLRTMIATDDLPPGARLRERTLAERLQVSRTPLREALNILR
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
GDGLVTLTPNRGAVVTVLSSAQVQEKLAVLGLIEGFGGELACQNASEDEIAEIRALHYDM
CCCEEEECCCCCEEEEEECHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHH
AAAFERRDRAVYFRTNQAIHRAIQVAAHNTTLLEVFEQINRQIYRYRYQGSLNAQTWHTA
HHHHHHCCCEEEEECHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
LAEHEEIIRLLSARAAEALGALLRAHVHSTWDKIDWAALTPAVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCC
>Mature Secondary Structure 
PNFTHNQAIHAGVRLFFRLWPRVERNGISTAIANGWGMAVIKTGDDGDLGEDARSGAAG
CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEEEEECCCCCCCCHHHCCCCC
EAGSEAAWAPALLSRQIAQTLRTMIATDDLPPGARLRERTLAERLQVSRTPLREALNILR
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
GDGLVTLTPNRGAVVTVLSSAQVQEKLAVLGLIEGFGGELACQNASEDEIAEIRALHYDM
CCCEEEECCCCCEEEEEECHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHH
AAAFERRDRAVYFRTNQAIHRAIQVAAHNTTLLEVFEQINRQIYRYRYQGSLNAQTWHTA
HHHHHHCCCEEEEECHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
LAEHEEIIRLLSARAAEALGALLRAHVHSTWDKIDWAALTPAVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA