Click here to switch to the map view.

The map label for this gene is 83594424

Identifier: 83594424

GI number: 83594424

Start: 3559919

End: 3561253

Strand: Reverse

Name: 83594424

Synonym: Rru_A3094

Alternate gene names: NA

Gene position: 3561253-3559919 (Counterclockwise)

Preceding gene: 83594436

Following gene: 83594423

Centisome position: 81.81

GC content: 64.57

Gene sequence:

>1335_bases
ATGCGGGATCTGCTGCTCGCGCTATTGCTGGTTTCCAGCCTGCCGTTGATCATCGTCCGGCCCTATGTGGGCGTGTTCGT
CTGGTGCGTCGTGTCGCTGATGAACCCGCATCAGATGGCCTATGGCTTCATTTCATCGGCGCCGGTCGCCTTGCTGGTCG
CCGGATCGACGCTGATCGGGCTGCTCGCCTCGCGCGAGCCCAAGCGCCTGCCCGGCGATCCCATCGTCATCTGTATCCTG
CTTTTGGCCTTCTGGGTGTCGGTGACCACGGTCTTCGCCCTGCGCCCGGACGTGGCCTTTCCGTTGTGGGACCGCACGAT
CAAGATGTTCCTGATGGTGCTGGTCGGTCTGGCGCTGATCCGCAGCCGGCAGCGCCTGCACGCCCTGGTGTGGATCCTGG
TCGTCAGCATCGGCTTTTATGGGGTGCGTGGCGGCTTGTTCACCCTGGTCACCGGCGGTGGCGGGCGGGTGGTCGGTCCG
CCAACGACGATGATCGGCGACAACAACTCCCTGGCCGCCGCCCTGATCATGACCCTGCCCCTGATGCGCTATCTGCATCT
GCAATCGGCCAACCGCTGGATCCGCCTTGGCTTGGCCGGGGCGATGGGGCTGACGGCGCTGTCGGTCCTTGGTTCGTTTT
CGCGCGGCGCCCTGCTGGCGTCGGTGGCGATGTTTTTCTGGATGCTGGTGCGCTCGCGCAAGCGGCTGATGATCCTGGCT
TTGGGGGCGACCTTCGCCATTGGCGGGCTGTTCCTGATGCCCGAGAGCTGGCACGACCGGATGAACACCATCAGTGATTA
TCAGGAGGACGAATCGGCCATGGGCCGCCTCGACGCCTGGACCTTCGCCTTCAATCTGGCGGTGGAGCGGCCCTTGGTCG
GTGGCGGGTTCCGCATCAATGTCGACCGGGATGTGTTTTTGCGGTTTTCCCCCGAGGCCGGGATCAACCGGGCTTTCCAC
AGCATTTATTTCCAGGTTCTGGGCGAGCATGGCTTCGTTGGCCTGGGGTTGTTTCTGGCGACCCTGGCGCTGGGGTTTTT
CAAGGCCGGCGCGCTGTCGCGTCAATGCGCCGGTGATCCGAAACTGGCCTGGGCCCGCGATCTTGGCGCGATGTCCCAGG
TCAGTCTGGTTGGCTATGCCGCCGGCGGTGCCTTTCTCGATCTGGCCTTCTTCGATCTTTTCTATTTCGTCGCCCTGTTG
CCGGTGATGGCCAGTTGGGTTCTGGCCAACCCGCCGCCGGTCGTCTGGAAACCGAAACCGGTGAAAAGCCAAGTCCCGGG
GCGCGGCCGGCCGCGCCGCGCCGCCTTGCCGCCGCCGAGGGATGCCCTGCCATGA

Upstream 100 bases:

>100_bases
CCCTTTCACCGGAAGAACGCCTTCCGATAAGCTGGCGCAGCGCTCGATGCGGGATCGAGACGACTCCACCCGCCGACGGG
GGAGGGGAAAAGGACAGGGC

Downstream 100 bases:

>100_bases
CCGGCGGCGGGGCGAAAGGCCGGGCCCTGGTCGTCGGCGCCGCCCTGGCGATGGTGGCCTTTGTCGTCGAGGTGGTATCG
GCCTTCTTTCTGATGCCGTT

Product: O-antigen polymerase

Products: NA

Alternate protein names: Wzy Family Polymerase; O-Antigen Polymerase Family Protein

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MRDLLLALLLVSSLPLIIVRPYVGVFVWCVVSLMNPHQMAYGFISSAPVALLVAGSTLIGLLASREPKRLPGDPIVICIL
LLAFWVSVTTVFALRPDVAFPLWDRTIKMFLMVLVGLALIRSRQRLHALVWILVVSIGFYGVRGGLFTLVTGGGGRVVGP
PTTMIGDNNSLAAALIMTLPLMRYLHLQSANRWIRLGLAGAMGLTALSVLGSFSRGALLASVAMFFWMLVRSRKRLMILA
LGATFAIGGLFLMPESWHDRMNTISDYQEDESAMGRLDAWTFAFNLAVERPLVGGGFRINVDRDVFLRFSPEAGINRAFH
SIYFQVLGEHGFVGLGLFLATLALGFFKAGALSRQCAGDPKLAWARDLGAMSQVSLVGYAAGGAFLDLAFFDLFYFVALL
PVMASWVLANPPPVVWKPKPVKSQVPGRGRPRRAALPPPRDALP

Sequences:

>Translated_444_residues
MRDLLLALLLVSSLPLIIVRPYVGVFVWCVVSLMNPHQMAYGFISSAPVALLVAGSTLIGLLASREPKRLPGDPIVICIL
LLAFWVSVTTVFALRPDVAFPLWDRTIKMFLMVLVGLALIRSRQRLHALVWILVVSIGFYGVRGGLFTLVTGGGGRVVGP
PTTMIGDNNSLAAALIMTLPLMRYLHLQSANRWIRLGLAGAMGLTALSVLGSFSRGALLASVAMFFWMLVRSRKRLMILA
LGATFAIGGLFLMPESWHDRMNTISDYQEDESAMGRLDAWTFAFNLAVERPLVGGGFRINVDRDVFLRFSPEAGINRAFH
SIYFQVLGEHGFVGLGLFLATLALGFFKAGALSRQCAGDPKLAWARDLGAMSQVSLVGYAAGGAFLDLAFFDLFYFVALL
PVMASWVLANPPPVVWKPKPVKSQVPGRGRPRRAALPPPRDALP
>Mature_444_residues
MRDLLLALLLVSSLPLIIVRPYVGVFVWCVVSLMNPHQMAYGFISSAPVALLVAGSTLIGLLASREPKRLPGDPIVICIL
LLAFWVSVTTVFALRPDVAFPLWDRTIKMFLMVLVGLALIRSRQRLHALVWILVVSIGFYGVRGGLFTLVTGGGGRVVGP
PTTMIGDNNSLAAALIMTLPLMRYLHLQSANRWIRLGLAGAMGLTALSVLGSFSRGALLASVAMFFWMLVRSRKRLMILA
LGATFAIGGLFLMPESWHDRMNTISDYQEDESAMGRLDAWTFAFNLAVERPLVGGGFRINVDRDVFLRFSPEAGINRAFH
SIYFQVLGEHGFVGLGLFLATLALGFFKAGALSRQCAGDPKLAWARDLGAMSQVSLVGYAAGGAFLDLAFFDLFYFVALL
PVMASWVLANPPPVVWKPKPVKSQVPGRGRPRRAALPPPRDALP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48366; Mature: 48366

Theoretical pI: Translated: 11.00; Mature: 11.00

Prosite motif: PS00228 TUBULIN_B_AUTOREG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDLLLALLLVSSLPLIIVRPYVGVFVWCVVSLMNPHQMAYGFISSAPVALLVAGSTLIG
CHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHCHHHHHHHHHCCCCEEEEEHHHHHHH
LLASREPKRLPGDPIVICILLLAFWVSVTTVFALRPDVAFPLWDRTIKMFLMVLVGLALI
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
RSRQRLHALVWILVVSIGFYGVRGGLFTLVTGGGGRVVGPPTTMIGDNNSLAAALIMTLP
HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEECCCCEEECCCCHHHHHHHHHHH
LMRYLHLQSANRWIRLGLAGAMGLTALSVLGSFSRGALLASVAMFFWMLVRSRKRLMILA
HHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEE
LGATFAIGGLFLMPESWHDRMNTISDYQEDESAMGRLDAWTFAFNLAVERPLVGGGFRIN
ECHHHHHCCEEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHEEHHCCCCEECCCEEEE
VDRDVFLRFSPEAGINRAFHSIYFQVLGEHGFVGLGLFLATLALGFFKAGALSRQCAGDP
ECCEEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCC
KLAWARDLGAMSQVSLVGYAAGGAFLDLAFFDLFYFVALLPVMASWVLANPPPVVWKPKP
CCHHHHHHCCHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
VKSQVPGRGRPRRAALPPPRDALP
CCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRDLLLALLLVSSLPLIIVRPYVGVFVWCVVSLMNPHQMAYGFISSAPVALLVAGSTLIG
CHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHCHHHHHHHHHCCCCEEEEEHHHHHHH
LLASREPKRLPGDPIVICILLLAFWVSVTTVFALRPDVAFPLWDRTIKMFLMVLVGLALI
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
RSRQRLHALVWILVVSIGFYGVRGGLFTLVTGGGGRVVGPPTTMIGDNNSLAAALIMTLP
HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEECCCCEEECCCCHHHHHHHHHHH
LMRYLHLQSANRWIRLGLAGAMGLTALSVLGSFSRGALLASVAMFFWMLVRSRKRLMILA
HHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEE
LGATFAIGGLFLMPESWHDRMNTISDYQEDESAMGRLDAWTFAFNLAVERPLVGGGFRIN
ECHHHHHCCEEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHEEHHCCCCEECCCEEEE
VDRDVFLRFSPEAGINRAFHSIYFQVLGEHGFVGLGLFLATLALGFFKAGALSRQCAGDP
ECCEEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCC
KLAWARDLGAMSQVSLVGYAAGGAFLDLAFFDLFYFVALLPVMASWVLANPPPVVWKPKP
CCHHHHHHCCHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
VKSQVPGRGRPRRAALPPPRDALP
CCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA