| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594423
Identifier: 83594423
GI number: 83594423
Start: 3558399
End: 3559922
Strand: Reverse
Name: 83594423
Synonym: Rru_A3093
Alternate gene names: NA
Gene position: 3559922-3558399 (Counterclockwise)
Preceding gene: 83594424
Following gene: 83594422
Centisome position: 81.78
GC content: 66.86
Gene sequence:
>1524_bases ATGACCGGCGGCGGGGCGAAAGGCCGGGCCCTGGTCGTCGGCGCCGCCCTGGCGATGGTGGCCTTTGTCGTCGAGGTGGT ATCGGCCTTCTTTCTGATGCCGTTCCTGATCCATGCCCTGGGCCCCGAACGTTATGGGCTATGGGCGCTGATCGGCACCA TCATCGCCCAGTTCTCGTTGCTTGATTTCGGCCTGTCGGCCACGGCGCAGCGTTACATGGCCGGGGCTTTGGCCCAAGAC GACCGGGCGCGGGCGGGCGAGATCTTTTCGGCCGCGGCCCTGCTGTTCCTGATCGCCGGAGGGGTCGCCTTCGCCCTCAG CCTGATCCTGGCCGGCGGCGCGCCGCTGGTGATGGCGCCGGGCCCCGGCCGTGACGAATTCGCCCTCGCCCTGGCCATCA TGGGGGGGATGGTCGGTCTGTCGCTGCCGCTCAACGTCGTCCGCGGAACGGTCATGGCGCGGATGTCGTTCGCCTGGCTC AGCGTCATCGAGATCGGCCGCGCCCTGCTGCGGGTTGGCGCGGTGGTGCTGGTCATCGACCAGGGGCGCGGGCTGGCGGC TTTGGCGGCGATCACCCTGGCGATCACCGTTCTCGAGGCGGCCGCCTTGCGTCTTTTGCTCGCCCGGGTTCTTCCCTGGC TGTCGGTCCGCCCGGGCGGTGTGCGACGGGCGACGTTGATCGAGCTGTTTCACTTCAGCAAGCATGTCTTCGTGGTGAAG ATCGGCGATATGGCGCGCTACCGGATGGATAATTTCATCATCGCCCCGGTTCTGGGCCTAAGCGCCGTCACCCATTATTC GGCGGCCTCGCGGCTGGCCGATACCTTCATCTCGCTGATCGATCGCGTTTTCACGCTGTGCGGGCCGGTGTTCTCGGGCT ATGCGGCGCTCGATGACCGCGAGAACATGCGCGAGAAGTTCTTGCTGTTCACCCGCTTCGCCACCCTGGCGACCGCTTGC GCCGCCGGCGGCGTGCTGAGCGCCGGATGGATCTTTATTCCGTTGTGGCTGGGGCCCGAGTTCATCGACAGCTATCATGC CATGGCCGCCCTGACCGTCGGTCTGACGGCCCTGCTGATCCAGGCGCCGACCCGCGAGGTTCTAAGCGCGCTATACAAGC ATCCCTTCGACGCCTGGACCAATCTGGCCGAGGCGGTGGCCAATCTGGCGATCAGCCTGCTGCTGGTGGGCGATTTCGGC ATTCTCGGGGTGGCCTTGGGCACGGCGATCCCGATGGTCGTGGTCAAGATGGGCGTGCTGCCGGTCTATGCCTGCCGCAG GATCGGCCTCGGCGTGGGCACCTATTATCGTCTGGTGGCGGGCGCTCTGGCGGTGGTGGCCCTGTGCCATCTGCCGATCG TCGCGGTGATGGTCAGCATCCCCCATAGCTTCCCCGCCCTGTTCACCGCCGCCCTGGTCTGTTACGGCCTGCTGGGCATG GTTTTGTTCCGTTTCGCCCTTCCCCGGGAGATCCGCGCCCTTCTTCTGGCCAGCCTGCGCCCGGCGCGGGTGGCCGCGGT TTGA
Upstream 100 bases:
>100_bases CGCCGCCGGTCGTCTGGAAACCGAAACCGGTGAAAAGCCAAGTCCCGGGGCGCGGCCGGCCGCGCCGCGCCGCCTTGCCG CCGCCGAGGGATGCCCTGCC
Downstream 100 bases:
>100_bases GGAGCGAGGCGATGGACCGGGAGAAGGCTTTGGCGCCCTTATCCGAGATCGGCCCGGCTTGTCGGTTTTTTCGCCTTTTT CGGTGCGAGGCCGCCCGACG
Product: O-antigen and teichoic acid-like export protein
Products: NA
Alternate protein names: Polysaccharide Biosynthesis Family Protein; O-Antigen And Teichoic Acid-Like Export Protein
Number of amino acids: Translated: 507; Mature: 506
Protein sequence:
>507_residues MTGGGAKGRALVVGAALAMVAFVVEVVSAFFLMPFLIHALGPERYGLWALIGTIIAQFSLLDFGLSATAQRYMAGALAQD DRARAGEIFSAAALLFLIAGGVAFALSLILAGGAPLVMAPGPGRDEFALALAIMGGMVGLSLPLNVVRGTVMARMSFAWL SVIEIGRALLRVGAVVLVIDQGRGLAALAAITLAITVLEAAALRLLLARVLPWLSVRPGGVRRATLIELFHFSKHVFVVK IGDMARYRMDNFIIAPVLGLSAVTHYSAASRLADTFISLIDRVFTLCGPVFSGYAALDDRENMREKFLLFTRFATLATAC AAGGVLSAGWIFIPLWLGPEFIDSYHAMAALTVGLTALLIQAPTREVLSALYKHPFDAWTNLAEAVANLAISLLLVGDFG ILGVALGTAIPMVVVKMGVLPVYACRRIGLGVGTYYRLVAGALAVVALCHLPIVAVMVSIPHSFPALFTAALVCYGLLGM VLFRFALPREIRALLLASLRPARVAAV
Sequences:
>Translated_507_residues MTGGGAKGRALVVGAALAMVAFVVEVVSAFFLMPFLIHALGPERYGLWALIGTIIAQFSLLDFGLSATAQRYMAGALAQD DRARAGEIFSAAALLFLIAGGVAFALSLILAGGAPLVMAPGPGRDEFALALAIMGGMVGLSLPLNVVRGTVMARMSFAWL SVIEIGRALLRVGAVVLVIDQGRGLAALAAITLAITVLEAAALRLLLARVLPWLSVRPGGVRRATLIELFHFSKHVFVVK IGDMARYRMDNFIIAPVLGLSAVTHYSAASRLADTFISLIDRVFTLCGPVFSGYAALDDRENMREKFLLFTRFATLATAC AAGGVLSAGWIFIPLWLGPEFIDSYHAMAALTVGLTALLIQAPTREVLSALYKHPFDAWTNLAEAVANLAISLLLVGDFG ILGVALGTAIPMVVVKMGVLPVYACRRIGLGVGTYYRLVAGALAVVALCHLPIVAVMVSIPHSFPALFTAALVCYGLLGM VLFRFALPREIRALLLASLRPARVAAV >Mature_506_residues TGGGAKGRALVVGAALAMVAFVVEVVSAFFLMPFLIHALGPERYGLWALIGTIIAQFSLLDFGLSATAQRYMAGALAQDD RARAGEIFSAAALLFLIAGGVAFALSLILAGGAPLVMAPGPGRDEFALALAIMGGMVGLSLPLNVVRGTVMARMSFAWLS VIEIGRALLRVGAVVLVIDQGRGLAALAAITLAITVLEAAALRLLLARVLPWLSVRPGGVRRATLIELFHFSKHVFVVKI GDMARYRMDNFIIAPVLGLSAVTHYSAASRLADTFISLIDRVFTLCGPVFSGYAALDDRENMREKFLLFTRFATLATACA AGGVLSAGWIFIPLWLGPEFIDSYHAMAALTVGLTALLIQAPTREVLSALYKHPFDAWTNLAEAVANLAISLLLVGDFGI LGVALGTAIPMVVVKMGVLPVYACRRIGLGVGTYYRLVAGALAVVALCHLPIVAVMVSIPHSFPALFTAALVCYGLLGMV LFRFALPREIRALLLASLRPARVAAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53514; Mature: 53383
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: PS00104 EPSP_SYNTHASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGGGAKGRALVVGAALAMVAFVVEVVSAFFLMPFLIHALGPERYGLWALIGTIIAQFSL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH LDFGLSATAQRYMAGALAQDDRARAGEIFSAAALLFLIAGGVAFALSLILAGGAPLVMAP HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECC GPGRDEFALALAIMGGMVGLSLPLNVVRGTVMARMSFAWLSVIEIGRALLRVGAVVLVID CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEE QGRGLAALAAITLAITVLEAAALRLLLARVLPWLSVRPGGVRRATLIELFHFSKHVFVVK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEEEE IGDMARYRMDNFIIAPVLGLSAVTHYSAASRLADTFISLIDRVFTLCGPVFSGYAALDDR ECCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCH ENMREKFLLFTRFATLATACAAGGVLSAGWIFIPLWLGPEFIDSYHAMAALTVGLTALLI HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEEHHCCHHHHHHHHHHHHHHHHHHHHHH QAPTREVLSALYKHPFDAWTNLAEAVANLAISLLLVGDFGILGVALGTAIPMVVVKMGVL HCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PVYACRRIGLGVGTYYRLVAGALAVVALCHLPIVAVMVSIPHSFPALFTAALVCYGLLGM HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH VLFRFALPREIRALLLASLRPARVAAV HHHHHHCCHHHHHHHHHCCCCHHHCCC >Mature Secondary Structure TGGGAKGRALVVGAALAMVAFVVEVVSAFFLMPFLIHALGPERYGLWALIGTIIAQFSL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH LDFGLSATAQRYMAGALAQDDRARAGEIFSAAALLFLIAGGVAFALSLILAGGAPLVMAP HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECC GPGRDEFALALAIMGGMVGLSLPLNVVRGTVMARMSFAWLSVIEIGRALLRVGAVVLVID CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEE QGRGLAALAAITLAITVLEAAALRLLLARVLPWLSVRPGGVRRATLIELFHFSKHVFVVK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEEEE IGDMARYRMDNFIIAPVLGLSAVTHYSAASRLADTFISLIDRVFTLCGPVFSGYAALDDR ECCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCH ENMREKFLLFTRFATLATACAAGGVLSAGWIFIPLWLGPEFIDSYHAMAALTVGLTALLI HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEEHHCCHHHHHHHHHHHHHHHHHHHHHH QAPTREVLSALYKHPFDAWTNLAEAVANLAISLLLVGDFGILGVALGTAIPMVVVKMGVL HCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PVYACRRIGLGVGTYYRLVAGALAVVALCHLPIVAVMVSIPHSFPALFTAALVCYGLLGM HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH VLFRFALPREIRALLLASLRPARVAAV HHHHHHCCHHHHHHHHHCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA