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The map label for this gene is pimB [H]

Identifier: 83594421

GI number: 83594421

Start: 3554585

End: 3556897

Strand: Reverse

Name: pimB [H]

Synonym: Rru_A3091

Alternate gene names: 83594421

Gene position: 3556897-3554585 (Counterclockwise)

Preceding gene: 83594422

Following gene: 83594420

Centisome position: 81.71

GC content: 68.01

Gene sequence:

>2313_bases
GTGAAGAAAGGCGACACCATGGGGCGCGGGCGATCCATCCTGTTTCTGTCGAGCAATTTCCCGCCGGTGATCGGCGGGTC
CTCGGTGGTCTACGACCAGATTTGCCGCAACGCCTCCGAGCAGGTGGTGGTGCTGGCGCCCCGGCGGAACCATGAAACCG
GCCAAGTCCACCCCGGCACCGACAGCCATGACCGCGCCTGCGGCTACCCGGTGCATCGCGTCGATTACCTGCGTCCGCCC
ATTCCCCAAGGTCCGCGATCCCGGCTGGGGCATCTGACCGATGCCCTGCGCTATGACCTGCCGGTGATGGCCAGGGCCCT
GGCGGCGGCGATCGGGCTGATCGTGCGCTACCGGGTCAAGGTGGTGTGCATCGGCGAGCTGGTGCAGAACGGTTGGATGG
TTTTGCCGCTGCGCTATCTTCTGGGGCGGCGGGTGGTTCTTTATACCCACGGCGAGGAAATCTCGGAGGACGGGCTGGGT
CTGTTGATGGCCAAGCGGGCGATTTGGCTGCGCCATGCCCATAAAGTGGTGGCGGTCAGCCTGTTTTGCAAAAGCATGAT
CGTCGCCCGCTTCCACATCGATCCGGCCAAGGTTTCCGTTATTACCAATGGCGTCAATCTGGGGATTTTCAACCGCGAGG
GGCCGCTCGATCCGCGCGCTCTGCCGGCGGCGGCGGTGGGGCGCAAGGTGGTGCTGGCGGTCTCGCGTCTGGTGGAGCGC
AAGGGCATCGACCGCCTGATCCGTGCTTTTCCCGCCATCGCCGCCAGCATCCCCGAGGCCCATTTGGTCATCGCCGGCAG
CGGGCCGCTGGGCCTGTCGCTGGAGGAACTGGCCCGCGCCCTGGGATTGGGCGAAGACCAGGTCTCCTTCCTGGGGCCGA
TCAGCCAAGAGCGGCTGGTGGCGCTTTATCGCTTGGCCGATGTTTTCGCCTTGCCCTGCCGCACCCTGGCCAATGGCGAT
ACCGAAGGCTTCGGTCTGGTGTTCCTGGAAGCCAACGCCTGTGGCACGCCGGTGGTCGCCGGCGGGGCGGGGGGAACGGT
CGAGGCGGTGGTCGATGGCGAGACCGGGCTGATCGTCGATGGCGGCGATCCCCAAGCCATCGCCCTGGCGGTCAACACCC
TGCTCGCCGATGCCCCCGGCGCGGCGCGGATGGCCGAGGCCGGTTGGAAAAGGGCCCTGAGCTATGGTTGGCCGGCGGTG
GCGCGCCGTTTCGTCGAGGTTAGCCTGAACGCCCGCAAAGACGCGCCCGAGCCGGCCTATCAGCCCGGTGACATTACCTC
CCTTAGCCTGGACGGGCCGACCCGGCTGCTGGTCAGCGTCGATCTGGAAGAGGCCTTCGACTGGTCGACCTTTTCGCGCG
AGGGCTATCAGATCAAAGGCTGGCAAGCCCTGGAGGAGTTTCATGCCGGATGCCGGGGGCTTGGGGTGTCGCCGGTCTAT
CTGGCGACCTATCCGATGCTGGGCGATCCGGTGATCTGCGCCTTCCTGCGCCGCTGCCTTGAGCGTGGCGAGGCCGAGGT
CGGGATCCATCTGCACGGCTGGGTGACGCCGCCCTATTGGGAGCATCCAAATGTCTTCAACAGTTATCAGTGCAATCTGC
CCGAACACGTGGAGCGGCGTAAACTCGAGGCGCTGATCGCGCTGTTTACCGAGCGCATGGGGCAGGCGCCCTTGCTGCAC
CGCGCCGGGCGCTGGGGCGGCGGGGCGCGGACGGCGGCGCTTCTTGCCGAGATGGGGCTACGGGTCGATCTCAGCCCCTG
CGCCGGTTTCGGCGCGAGCCCGCAGGGCGGGCCGGATTTCTCGGCTTTGAGCGGCGCCCCCTTCCGCGCCGGACCCGGGC
GCGACGTGCTAACGATCCCGGCCACCACCTTGCGCTTCCTGCGCGGCCCGCTCGCGCTGTCCCAGGCGCTTTTCCGCTGG
TCGGGGCGGCGTGGACCGAAGGGATGGGCCTCGCCGCTGGCGTCGCTGGGCACCCTGGTGCGCTTTTCCTCGGAAGATCT
GACCACCGCGCAATTGCGCGCCTTCGCCCATGAACTGACCCTGCGCAAGGCGCCGATCGCCACCTTCACCGTTCACCACA
CCTCGCTCTATGGCGGCGGCAACGACTATGCCCCCGATGAGGCGGCGGCGCGGGCCGTGCGCGAGCGGGCCTTCGCCACC
TTGGCCTATGCCATCGACACCTGCGGCATGCGGCCCACGCGCTGCGCCGATTTGCTGGCGGAGACCCGCATGGTGTCGCC
GGAGCGCTCCGCCGATCTGCGCTCCGACGACGCGGCCCTGGCGCCGGCAAGGCCGCTGGCCGCCCTGCCATGA

Upstream 100 bases:

>100_bases
AATACCTATCGCCGCTGCTTGGGCGGGCCCGCGTGCAGATCGGCGCGGCCGATGTTGGGGCTTATGAATATCGGCCGGCG
CAGTAAGGGGACTTCAGCGC

Downstream 100 bases:

>100_bases
ACCCGGGCGGCGCCGAGGTGTCGGTGGTGATTCCGGCCTGGAACGCCGAAGCCACCCTCGGCCGGGCCCTGGCCTCGGTG
CGGGCGCAAACCCTGGCGCC

Product: glycosyl transferase, group 1

Products: NA

Alternate protein names: Alpha-D-mannose-alpha-(1-6)-phosphatidylmyo-inositol-mannosyltransferase; Alpha-mannosyltransferase; Alpha-manT; Guanosine diphosphomannose-phosphatidyl-inositol alpha-mannosyltransferase; Phosphatidylinositol alpha-mannosyltransferase; PI alpha-mannosyltransferase [H]

Number of amino acids: Translated: 770; Mature: 770

Protein sequence:

>770_residues
MKKGDTMGRGRSILFLSSNFPPVIGGSSVVYDQICRNASEQVVVLAPRRNHETGQVHPGTDSHDRACGYPVHRVDYLRPP
IPQGPRSRLGHLTDALRYDLPVMARALAAAIGLIVRYRVKVVCIGELVQNGWMVLPLRYLLGRRVVLYTHGEEISEDGLG
LLMAKRAIWLRHAHKVVAVSLFCKSMIVARFHIDPAKVSVITNGVNLGIFNREGPLDPRALPAAAVGRKVVLAVSRLVER
KGIDRLIRAFPAIAASIPEAHLVIAGSGPLGLSLEELARALGLGEDQVSFLGPISQERLVALYRLADVFALPCRTLANGD
TEGFGLVFLEANACGTPVVAGGAGGTVEAVVDGETGLIVDGGDPQAIALAVNTLLADAPGAARMAEAGWKRALSYGWPAV
ARRFVEVSLNARKDAPEPAYQPGDITSLSLDGPTRLLVSVDLEEAFDWSTFSREGYQIKGWQALEEFHAGCRGLGVSPVY
LATYPMLGDPVICAFLRRCLERGEAEVGIHLHGWVTPPYWEHPNVFNSYQCNLPEHVERRKLEALIALFTERMGQAPLLH
RAGRWGGGARTAALLAEMGLRVDLSPCAGFGASPQGGPDFSALSGAPFRAGPGRDVLTIPATTLRFLRGPLALSQALFRW
SGRRGPKGWASPLASLGTLVRFSSEDLTTAQLRAFAHELTLRKAPIATFTVHHTSLYGGGNDYAPDEAAARAVRERAFAT
LAYAIDTCGMRPTRCADLLAETRMVSPERSADLRSDDAALAPARPLAALP

Sequences:

>Translated_770_residues
MKKGDTMGRGRSILFLSSNFPPVIGGSSVVYDQICRNASEQVVVLAPRRNHETGQVHPGTDSHDRACGYPVHRVDYLRPP
IPQGPRSRLGHLTDALRYDLPVMARALAAAIGLIVRYRVKVVCIGELVQNGWMVLPLRYLLGRRVVLYTHGEEISEDGLG
LLMAKRAIWLRHAHKVVAVSLFCKSMIVARFHIDPAKVSVITNGVNLGIFNREGPLDPRALPAAAVGRKVVLAVSRLVER
KGIDRLIRAFPAIAASIPEAHLVIAGSGPLGLSLEELARALGLGEDQVSFLGPISQERLVALYRLADVFALPCRTLANGD
TEGFGLVFLEANACGTPVVAGGAGGTVEAVVDGETGLIVDGGDPQAIALAVNTLLADAPGAARMAEAGWKRALSYGWPAV
ARRFVEVSLNARKDAPEPAYQPGDITSLSLDGPTRLLVSVDLEEAFDWSTFSREGYQIKGWQALEEFHAGCRGLGVSPVY
LATYPMLGDPVICAFLRRCLERGEAEVGIHLHGWVTPPYWEHPNVFNSYQCNLPEHVERRKLEALIALFTERMGQAPLLH
RAGRWGGGARTAALLAEMGLRVDLSPCAGFGASPQGGPDFSALSGAPFRAGPGRDVLTIPATTLRFLRGPLALSQALFRW
SGRRGPKGWASPLASLGTLVRFSSEDLTTAQLRAFAHELTLRKAPIATFTVHHTSLYGGGNDYAPDEAAARAVRERAFAT
LAYAIDTCGMRPTRCADLLAETRMVSPERSADLRSDDAALAPARPLAALP
>Mature_770_residues
MKKGDTMGRGRSILFLSSNFPPVIGGSSVVYDQICRNASEQVVVLAPRRNHETGQVHPGTDSHDRACGYPVHRVDYLRPP
IPQGPRSRLGHLTDALRYDLPVMARALAAAIGLIVRYRVKVVCIGELVQNGWMVLPLRYLLGRRVVLYTHGEEISEDGLG
LLMAKRAIWLRHAHKVVAVSLFCKSMIVARFHIDPAKVSVITNGVNLGIFNREGPLDPRALPAAAVGRKVVLAVSRLVER
KGIDRLIRAFPAIAASIPEAHLVIAGSGPLGLSLEELARALGLGEDQVSFLGPISQERLVALYRLADVFALPCRTLANGD
TEGFGLVFLEANACGTPVVAGGAGGTVEAVVDGETGLIVDGGDPQAIALAVNTLLADAPGAARMAEAGWKRALSYGWPAV
ARRFVEVSLNARKDAPEPAYQPGDITSLSLDGPTRLLVSVDLEEAFDWSTFSREGYQIKGWQALEEFHAGCRGLGVSPVY
LATYPMLGDPVICAFLRRCLERGEAEVGIHLHGWVTPPYWEHPNVFNSYQCNLPEHVERRKLEALIALFTERMGQAPLLH
RAGRWGGGARTAALLAEMGLRVDLSPCAGFGASPQGGPDFSALSGAPFRAGPGRDVLTIPATTLRFLRGPLALSQALFRW
SGRRGPKGWASPLASLGTLVRFSSEDLTTAQLRAFAHELTLRKAPIATFTVHHTSLYGGGNDYAPDEAAARAVRERAFAT
LAYAIDTCGMRPTRCADLLAETRMVSPERSADLRSDDAALAPARPLAALP

Specific function: Catalyzes the addition of a mannose residue from GDP-D- mannose to the position 6 of a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1) to generate phosphatidyl-myo-inositol bearing alpha-1,2- and alpha-1,6-linked mannose resid

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Homo sapiens, GI11863130, Length=184, Percent_Identity=29.8913043478261, Blast_Score=71, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI32564184, Length=353, Percent_Identity=26.0623229461756, Blast_Score=80, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17532709, Length=355, Percent_Identity=24.7887323943662, Blast_Score=70, Evalue=4e-12,
Organism=Saccharomyces cerevisiae, GI9755344, Length=248, Percent_Identity=27.0161290322581, Blast_Score=82, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: =2.4.1.57 [H]

Molecular weight: Translated: 82819; Mature: 82819

Theoretical pI: Translated: 8.57; Mature: 8.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKGDTMGRGRSILFLSSNFPPVIGGSSVVYDQICRNASEQVVVLAPRRNHETGQVHPGT
CCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCC
DSHDRACGYPVHRVDYLRPPIPQGPRSRLGHLTDALRYDLPVMARALAAAIGLIVRYRVK
CCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
VVCIGELVQNGWMVLPLRYLLGRRVVLYTHGEEISEDGLGLLMAKRAIWLRHAHKVVAVS
EEEEHHHHHCCEEEEEHHHHHCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LFCKSMIVARFHIDPAKVSVITNGVNLGIFNREGPLDPRALPAAAVGRKVVLAVSRLVER
HHHHHHHHHHEECCHHEEEEEECCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
KGIDRLIRAFPAIAASIPEAHLVIAGSGPLGLSLEELARALGLGEDQVSFLGPISQERLV
HCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHCCCCCHHHHHCCCCHHHHH
ALYRLADVFALPCRTLANGDTEGFGLVFLEANACGTPVVAGGAGGTVEAVVDGETGLIVD
HHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEECCCCCEEEEEEECCCEEEEE
GGDPQAIALAVNTLLADAPGAARMAEAGWKRALSYGWPAVARRFVEVSLNARKDAPEPAY
CCCCCEEHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCC
QPGDITSLSLDGPTRLLVSVDLEEAFDWSTFSREGYQIKGWQALEEFHAGCRGLGVSPVY
CCCCEEEEECCCCEEEEEEEEHHHHCCCCCCCCCCCEECCHHHHHHHHHHHCCCCCCCCC
LATYPMLGDPVICAFLRRCLERGEAEVGIHLHGWVTPPYWEHPNVFNSYQCNLPEHVERR
EEECCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCEECCCHHHHHHH
KLEALIALFTERMGQAPLLHRAGRWGGGARTAALLAEMGLRVDLSPCAGFGASPQGGPDF
HHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCC
SALSGAPFRAGPGRDVLTIPATTLRFLRGPLALSQALFRWSGRRGPKGWASPLASLGTLV
CCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
RFSSEDLTTAQLRAFAHELTLRKAPIATFTVHHTSLYGGGNDYAPDEAAARAVRERAFAT
EECCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHH
LAYAIDTCGMRPTRCADLLAETRMVSPERSADLRSDDAALAPARPLAALP
HHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKGDTMGRGRSILFLSSNFPPVIGGSSVVYDQICRNASEQVVVLAPRRNHETGQVHPGT
CCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCC
DSHDRACGYPVHRVDYLRPPIPQGPRSRLGHLTDALRYDLPVMARALAAAIGLIVRYRVK
CCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
VVCIGELVQNGWMVLPLRYLLGRRVVLYTHGEEISEDGLGLLMAKRAIWLRHAHKVVAVS
EEEEHHHHHCCEEEEEHHHHHCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LFCKSMIVARFHIDPAKVSVITNGVNLGIFNREGPLDPRALPAAAVGRKVVLAVSRLVER
HHHHHHHHHHEECCHHEEEEEECCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
KGIDRLIRAFPAIAASIPEAHLVIAGSGPLGLSLEELARALGLGEDQVSFLGPISQERLV
HCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHCCCCCHHHHHCCCCHHHHH
ALYRLADVFALPCRTLANGDTEGFGLVFLEANACGTPVVAGGAGGTVEAVVDGETGLIVD
HHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEECCCCCEEEEEEECCCEEEEE
GGDPQAIALAVNTLLADAPGAARMAEAGWKRALSYGWPAVARRFVEVSLNARKDAPEPAY
CCCCCEEHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCC
QPGDITSLSLDGPTRLLVSVDLEEAFDWSTFSREGYQIKGWQALEEFHAGCRGLGVSPVY
CCCCEEEEECCCCEEEEEEEEHHHHCCCCCCCCCCCEECCHHHHHHHHHHHCCCCCCCCC
LATYPMLGDPVICAFLRRCLERGEAEVGIHLHGWVTPPYWEHPNVFNSYQCNLPEHVERR
EEECCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCEECCCHHHHHHH
KLEALIALFTERMGQAPLLHRAGRWGGGARTAALLAEMGLRVDLSPCAGFGASPQGGPDF
HHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCC
SALSGAPFRAGPGRDVLTIPATTLRFLRGPLALSQALFRWSGRRGPKGWASPLASLGTLV
CCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
RFSSEDLTTAQLRAFAHELTLRKAPIATFTVHHTSLYGGGNDYAPDEAAARAVRERAFAT
EECCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHH
LAYAIDTCGMRPTRCADLLAETRMVSPERSADLRSDDAALAPARPLAALP
HHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA