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The map label for this gene is 83594412

Identifier: 83594412

GI number: 83594412

Start: 3547484

End: 3547765

Strand: Direct

Name: 83594412

Synonym: Rru_A3082

Alternate gene names: NA

Gene position: 3547484-3547765 (Clockwise)

Preceding gene: 83594411

Following gene: 83594417

Centisome position: 81.5

GC content: 63.12

Gene sequence:

>282_bases
ATGATCAAAACCAAGCCCTTCGATGCCGCACGTCATCTGACCTCGCCGGAAGCCCAGCAAGACCTGCTTAACGATGCCTT
CGCCAGCGGCAGCGCGTCCTATATCGCCGACGCCCTTGGCGTGATCGCCCGGGCTCGCGGAATGACGGATGTGGCACGCG
AGGCGGGCGTGACGCGAGAGGCGCTGTATAAATCGCTAAGCGAAGACGGCGATCCGCGCCTGACAACCCTTCTGGGCGTC
GCCCGGGCATTGGGGGTGACTCTGACCGCCCGTCTTGATTAA

Upstream 100 bases:

>100_bases
GGGAACGACCCTCATCATCTTGCTGTGTGGCGGCATCAAAGGGGCCCAGCGCCGTGATATCGCCAGAGCGAAGGCGATGG
CCGCAGAAGTGGAAAGCTGA

Downstream 100 bases:

>100_bases
GGCCGCGATCGGACAGTCCGTGTCGACCCCGCGCCCGCTCCGTCTACCAAAAAGCGGGCGCGGGGGTTTGATCAGGGGGC
GGCGAGTTTGCGGACGAAGG

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 93; Mature: 93

Protein sequence:

>93_residues
MIKTKPFDAARHLTSPEAQQDLLNDAFASGSASYIADALGVIARARGMTDVAREAGVTREALYKSLSEDGDPRLTTLLGV
ARALGVTLTARLD

Sequences:

>Translated_93_residues
MIKTKPFDAARHLTSPEAQQDLLNDAFASGSASYIADALGVIARARGMTDVAREAGVTREALYKSLSEDGDPRLTTLLGV
ARALGVTLTARLD
>Mature_93_residues
MIKTKPFDAARHLTSPEAQQDLLNDAFASGSASYIADALGVIARARGMTDVAREAGVTREALYKSLSEDGDPRLTTLLGV
ARALGVTLTARLD

Specific function: Unknown

COG id: COG3636

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014057
- InterPro:   IPR001387 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 9832; Mature: 9832

Theoretical pI: Translated: 5.82; Mature: 5.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKTKPFDAARHLTSPEAQQDLLNDAFASGSASYIADALGVIARARGMTDVAREAGVTRE
CCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCHH
ALYKSLSEDGDPRLTTLLGVARALGVTLTARLD
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHEECC
>Mature Secondary Structure
MIKTKPFDAARHLTSPEAQQDLLNDAFASGSASYIADALGVIARARGMTDVAREAGVTRE
CCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCHH
ALYKSLSEDGDPRLTTLLGVARALGVTLTARLD
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]