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The map label for this gene is etfB [H]

Identifier: 83594407

GI number: 83594407

Start: 3543095

End: 3543844

Strand: Direct

Name: etfB [H]

Synonym: Rru_A3077

Alternate gene names: 83594407

Gene position: 3543095-3543844 (Clockwise)

Preceding gene: 83594406

Following gene: 83594408

Centisome position: 81.4

GC content: 63.07

Gene sequence:

>750_bases
ATGAAAGTACTGGTCGCCGTGAAGCGGGTCGTCGACTATAACGTGAAAATCCGCGTTAAAGCGGATAACACGGGGGTCGA
ACTGGCTAACGTGAAGATGTCGATGAACCCCTTCGATGAAATCGCCGTCGAGGAAGCCATCCGGCTGAAGGAAGCGGGCA
CCGTGACCGAGGTCGTGGCCGTCTCGCTGGGGGTGGCGCAATGCCAGGAAACCTTGCGGACCGCCCTGGCGATGGGCGCC
GATCGCGGTATTCTGGTGCAAAGCGATGTCGAGCTGCAGCCGCTGGCCGTCGCCAAGATGCTAAAGGCCCTGGTCGAAAA
GGAGGCTCCCGATCTGATCCTTCTGGGCAAGCAGGCGATTGACGACGACGCCAACCAAACCGGTCAGATGCTGGCCGCCC
TGCTCGGCTGGTCGCAGGGAACCTTCCTGTCCAAGCTGACCCTGGCCGAAGGCAAGGCCACGGTGACCCGCGAAGTCGAC
GGCGGCCTTGAAACCCTGTCGCTGACCCTGCCCTCGGTGCTGACCGCCGATCTGCGGCTGAACACGCCGCGCTATGCCAG
CCTGCCCAATATCATGAAGGCCAAGAAAAAGCCGATCGAGACCCTGTCTCCGGCCGATCTGGGCGTCGATCCGGCCCCCC
GGCTGACCACGCTGAAGGTGGAAGAGCCCGCCAGCCGCAAGGCCGGCGTCCGCGTGCCCGACGTGGCCACATTGGTCGAA
AAGCTCAAGACCGAGGCGAAGGTGATCTGA

Upstream 100 bases:

>100_bases
CGAAAAGACGGGGGCCCGGAGACCGGGGCGGGGAGGCCCGGTCGTTGCGAAGACGAAACGGCCCGGCCTGGAAAACCCAC
GCTCGAAAGACAGGAAATCC

Downstream 100 bases:

>100_bases
CATGGCTTTGCTGGTAATCGCCGAACACGACAACGCGTCGCTCAAGCCCGCCACCCTCAATACGGTGGCCGCCGCCGCCC
AGTTGGGTGGTGACATTCAC

Product: electron transfer flavoprotein subunit beta

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MKVLVAVKRVVDYNVKIRVKADNTGVELANVKMSMNPFDEIAVEEAIRLKEAGTVTEVVAVSLGVAQCQETLRTALAMGA
DRGILVQSDVELQPLAVAKMLKALVEKEAPDLILLGKQAIDDDANQTGQMLAALLGWSQGTFLSKLTLAEGKATVTREVD
GGLETLSLTLPSVLTADLRLNTPRYASLPNIMKAKKKPIETLSPADLGVDPAPRLTTLKVEEPASRKAGVRVPDVATLVE
KLKTEAKVI

Sequences:

>Translated_249_residues
MKVLVAVKRVVDYNVKIRVKADNTGVELANVKMSMNPFDEIAVEEAIRLKEAGTVTEVVAVSLGVAQCQETLRTALAMGA
DRGILVQSDVELQPLAVAKMLKALVEKEAPDLILLGKQAIDDDANQTGQMLAALLGWSQGTFLSKLTLAEGKATVTREVD
GGLETLSLTLPSVLTADLRLNTPRYASLPNIMKAKKKPIETLSPADLGVDPAPRLTTLKVEEPASRKAGVRVPDVATLVE
KLKTEAKVI
>Mature_249_residues
MKVLVAVKRVVDYNVKIRVKADNTGVELANVKMSMNPFDEIAVEEAIRLKEAGTVTEVVAVSLGVAQCQETLRTALAMGA
DRGILVQSDVELQPLAVAKMLKALVEKEAPDLILLGKQAIDDDANQTGQMLAALLGWSQGTFLSKLTLAEGKATVTREVD
GGLETLSLTLPSVLTADLRLNTPRYASLPNIMKAKKKPIETLSPADLGVDPAPRLTTLKVEEPASRKAGVRVPDVATLVE
KLKTEAKVI

Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=247, Percent_Identity=65.1821862348178, Blast_Score=302, Evalue=1e-82,
Organism=Homo sapiens, GI62420877, Length=237, Percent_Identity=62.8691983122363, Blast_Score=276, Evalue=1e-74,
Organism=Escherichia coli, GI87081682, Length=232, Percent_Identity=29.3103448275862, Blast_Score=73, Evalue=1e-14,
Organism=Escherichia coli, GI2367123, Length=255, Percent_Identity=27.4509803921569, Blast_Score=62, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI25141345, Length=253, Percent_Identity=56.5217391304348, Blast_Score=259, Evalue=7e-70,
Organism=Saccharomyces cerevisiae, GI6321646, Length=256, Percent_Identity=51.171875, Blast_Score=234, Evalue=7e-63,
Organism=Drosophila melanogaster, GI24651147, Length=246, Percent_Identity=60.5691056910569, Blast_Score=276, Evalue=1e-74,
Organism=Drosophila melanogaster, GI24651145, Length=246, Percent_Identity=60.5691056910569, Blast_Score=276, Evalue=1e-74,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 26645; Mature: 26645

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: PS01065 ETF_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLVAVKRVVDYNVKIRVKADNTGVELANVKMSMNPFDEIAVEEAIRLKEAGTVTEVVA
CHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHH
VSLGVAQCQETLRTALAMGADRGILVQSDVELQPLAVAKMLKALVEKEAPDLILLGKQAI
HHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEECCHHC
DDDANQTGQMLAALLGWSQGTFLSKLTLAEGKATVTREVDGGLETLSLTLPSVLTADLRL
CCCCHHHHHHHHHHHCCCCCCHHHHEEECCCCEEEEEECCCCHHEEEEHHHHHHHHCEEE
NTPRYASLPNIMKAKKKPIETLSPADLGVDPAPRLTTLKVEEPASRKAGVRVPDVATLVE
CCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHH
KLKTEAKVI
HHHHHHCCC
>Mature Secondary Structure
MKVLVAVKRVVDYNVKIRVKADNTGVELANVKMSMNPFDEIAVEEAIRLKEAGTVTEVVA
CHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHH
VSLGVAQCQETLRTALAMGADRGILVQSDVELQPLAVAKMLKALVEKEAPDLILLGKQAI
HHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEECCHHC
DDDANQTGQMLAALLGWSQGTFLSKLTLAEGKATVTREVDGGLETLSLTLPSVLTADLRL
CCCCHHHHHHHHHHHCCCCCCHHHHEEECCCCEEEEEECCCCHHEEEEHHHHHHHHCEEE
NTPRYASLPNIMKAKKKPIETLSPADLGVDPAPRLTTLKVEEPASRKAGVRVPDVATLVE
CCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHH
KLKTEAKVI
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]