| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594352
Identifier: 83594352
GI number: 83594352
Start: 3480560
End: 3481333
Strand: Direct
Name: 83594352
Synonym: Rru_A3022
Alternate gene names: NA
Gene position: 3480560-3481333 (Clockwise)
Preceding gene: 83594350
Following gene: 83594353
Centisome position: 79.96
GC content: 67.44
Gene sequence:
>774_bases ATGACTGATCCCCGGGATGTGCTAACCCGCATCGTCGCCGACCGCAGCGTCGCCGACAGCCTTGCCGAGGCTGTCGCCGC CGGGACCCTGCGCCCGGGGGAGGATGGCGTCTGGCTGCGCCCGCCTACCGACGCCACCCCATCGAACTGGATCCGGGAAC AGCGGGACGCCAGCCGGAACTGCCGTTTCCACATGGGCGTCATGTTCAACCATGTCTATCGGAAGCGGCAGGTGCCGGCG GGCTGCGCGACCTGCTTCAAGGTGAAGGTCGTGCCGCGCAGCCTGCGCGAACTGATCGCCCTGCACACCGTCAGCCATGC CCTGCCCTATACCTACAAGTGTGGATTGGACGCCGCCTCGGCCTATACCTCGGGCCTCTATGGCGGCTATTTCTATGTGC ACGGGTTGGAGGCCGCCCGCGCCGCCCACCGGGCCGTTCGCCAGGCGGTGGACCGCCATCCCAAACTGGGGGATGCCGTC ACGGTCTTCATCAAGCGCGGCTGCACGGAGTACGAGGTCCATTGCGGCCCGTCCGACCGCTTCACGGTCCAGCCTGACCA AGCCGAGCTGGAGGCGGCGCTGTTCAGCCGCATCCGCCTAGAGCCTTCGCCGCCCGCCACCCGTATCCGGGTGCAGCAAA CCCTGGCCCATTGGATCAGGGAGGCCTATCGCCTGGGAGACGACAGCTATCTGGATTTCACCGGGGGGCGTCGGCTTTAT CCGGCCGTCGTTCGCTACGCCGCGACCGTGACGCCAGACGACGGGACGCCATGA
Upstream 100 bases:
>100_bases AGCCGTTTTGGTGGATGATGCCTGGGAAGCGGCCAGAGACGATGTGCGGGGTGCCCATCATGCGGGCGACACGCCGCCCC GGGACGGGGGCGGCCCGCCC
Downstream 100 bases:
>100_bases CCGCGCGCAGACTGCGTCGCGGCTTGTCTTTGCCCGCGGCCGAGCGCTGGCTGGCCGTCGAAGGGCTGGCCATGCTGGCG GTCAGCCGGGCCGTTCTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MTDPRDVLTRIVADRSVADSLAEAVAAGTLRPGEDGVWLRPPTDATPSNWIREQRDASRNCRFHMGVMFNHVYRKRQVPA GCATCFKVKVVPRSLRELIALHTVSHALPYTYKCGLDAASAYTSGLYGGYFYVHGLEAARAAHRAVRQAVDRHPKLGDAV TVFIKRGCTEYEVHCGPSDRFTVQPDQAELEAALFSRIRLEPSPPATRIRVQQTLAHWIREAYRLGDDSYLDFTGGRRLY PAVVRYAATVTPDDGTP
Sequences:
>Translated_257_residues MTDPRDVLTRIVADRSVADSLAEAVAAGTLRPGEDGVWLRPPTDATPSNWIREQRDASRNCRFHMGVMFNHVYRKRQVPA GCATCFKVKVVPRSLRELIALHTVSHALPYTYKCGLDAASAYTSGLYGGYFYVHGLEAARAAHRAVRQAVDRHPKLGDAV TVFIKRGCTEYEVHCGPSDRFTVQPDQAELEAALFSRIRLEPSPPATRIRVQQTLAHWIREAYRLGDDSYLDFTGGRRLY PAVVRYAATVTPDDGTP >Mature_256_residues TDPRDVLTRIVADRSVADSLAEAVAAGTLRPGEDGVWLRPPTDATPSNWIREQRDASRNCRFHMGVMFNHVYRKRQVPAG CATCFKVKVVPRSLRELIALHTVSHALPYTYKCGLDAASAYTSGLYGGYFYVHGLEAARAAHRAVRQAVDRHPKLGDAVT VFIKRGCTEYEVHCGPSDRFTVQPDQAELEAALFSRIRLEPSPPATRIRVQQTLAHWIREAYRLGDDSYLDFTGGRRLYP AVVRYAATVTPDDGTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28629; Mature: 28498
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDPRDVLTRIVADRSVADSLAEAVAAGTLRPGEDGVWLRPPTDATPSNWIREQRDASRN CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCHHHHHHHHHHHCCC CRFHMGVMFNHVYRKRQVPAGCATCFKVKVVPRSLRELIALHTVSHALPYTYKCGLDAAS CEEEHHHHHHHHHHHHCCCCHHHHHHEEEECHHHHHHHHHHHHHHHHCCCEEECCCCHHH AYTSGLYGGYFYVHGLEAARAAHRAVRQAVDRHPKLGDAVTVFIKRGCTEYEVHCGPSDR HHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEEECCCCC FTVQPDQAELEAALFSRIRLEPSPPATRIRVQQTLAHWIREAYRLGDDSYLDFTGGRRLY EEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHH PAVVRYAATVTPDDGTP HHHHHHHHEECCCCCCC >Mature Secondary Structure TDPRDVLTRIVADRSVADSLAEAVAAGTLRPGEDGVWLRPPTDATPSNWIREQRDASRN CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCHHHHHHHHHHHCCC CRFHMGVMFNHVYRKRQVPAGCATCFKVKVVPRSLRELIALHTVSHALPYTYKCGLDAAS CEEEHHHHHHHHHHHHCCCCHHHHHHEEEECHHHHHHHHHHHHHHHHCCCEEECCCCHHH AYTSGLYGGYFYVHGLEAARAAHRAVRQAVDRHPKLGDAVTVFIKRGCTEYEVHCGPSDR HHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEEECCCCC FTVQPDQAELEAALFSRIRLEPSPPATRIRVQQTLAHWIREAYRLGDDSYLDFTGGRRLY EEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHH PAVVRYAATVTPDDGTP HHHHHHHHEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA