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The map label for this gene is ymdF [C]

Identifier: 83594348

GI number: 83594348

Start: 3475582

End: 3475932

Strand: Direct

Name: ymdF [C]

Synonym: Rru_A3018

Alternate gene names: 83594348

Gene position: 3475582-3475932 (Clockwise)

Preceding gene: 83594347

Following gene: 83594349

Centisome position: 79.85

GC content: 63.25

Gene sequence:

>351_bases
ATGAGCGACAACCGTAACACCTCCGGCCGTGGCTTCGCTTCGATGGACGAAGACAAGCAGCGCGACATCGCCAGCAAGGG
TGGGCAGAGCGTTCCCAATGAGAAGCGCAGCTTCTCCAAAGACCACGAATTGGCGGCGGAAGCCGGCCGCAAGGGGGGAC
AGAACGTTCCCGACGAAAAGCGCAGCTTCTCCAAGGATCACGAGTTGGCGTCCCAGGCCGGTCAAAAGGGTGGCCAGAAC
TCGGGCGGCAATTTCGCCAATGATCCGGAACGGGCGGCCGAAGCGGGCCGCAAGGGCGGCGAGGCTTCTCATGGCTCGTC
AAGCGGGCAGTCGTCGTCGGACCATCGCTAG

Upstream 100 bases:

>100_bases
TTTGGAACGGCCCGTCTCGTTTTTCGTTTGACCCCCATGCTGAAAGATGCAGCGCCTAGGCGCTTATCCAGCATCTTTAA
AAAATCAACGGAGAACTCTG

Downstream 100 bases:

>100_bases
AGCGACTCCCGAGCGTTTCGGACGATGGCGCGAGGGCGATTTGCTTCGCTCTCCCTATATTAGGGCGGCGGGCCTGAGTA
AAATTTCAGGCACGCCGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 116; Mature: 115

Protein sequence:

>116_residues
MSDNRNTSGRGFASMDEDKQRDIASKGGQSVPNEKRSFSKDHELAAEAGRKGGQNVPDEKRSFSKDHELASQAGQKGGQN
SGGNFANDPERAAEAGRKGGEASHGSSSGQSSSDHR

Sequences:

>Translated_116_residues
MSDNRNTSGRGFASMDEDKQRDIASKGGQSVPNEKRSFSKDHELAAEAGRKGGQNVPDEKRSFSKDHELASQAGQKGGQN
SGGNFANDPERAAEAGRKGGEASHGSSSGQSSSDHR
>Mature_115_residues
SDNRNTSGRGFASMDEDKQRDIASKGGQSVPNEKRSFSKDHELAAEAGRKGGQNVPDEKRSFSKDHELASQAGQKGGQNS
GGNFANDPERAAEAGRKGGEASHGSSSGQSSSDHR

Specific function: Unknown

COG id: COG3729

COG function: function code R; General stress protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081817, Length=45, Percent_Identity=68.8888888888889, Blast_Score=64, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12191; Mature: 12060

Theoretical pI: Translated: 7.87; Mature: 7.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDNRNTSGRGFASMDEDKQRDIASKGGQSVPNEKRSFSKDHELAAEAGRKGGQNVPDEK
CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHCCCCCCCHHH
RSFSKDHELASQAGQKGGQNSGGNFANDPERAAEAGRKGGEASHGSSSGQSSSDHR
HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SDNRNTSGRGFASMDEDKQRDIASKGGQSVPNEKRSFSKDHELAAEAGRKGGQNVPDEK
CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHCCCCCCCHHH
RSFSKDHELASQAGQKGGQNSGGNFANDPERAAEAGRKGGEASHGSSSGQSSSDHR
HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA