| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is fabG [H]
Identifier: 83594347
GI number: 83594347
Start: 3474442
End: 3475233
Strand: Direct
Name: fabG [H]
Synonym: Rru_A3017
Alternate gene names: 83594347
Gene position: 3474442-3475233 (Clockwise)
Preceding gene: 83594346
Following gene: 83594348
Centisome position: 79.82
GC content: 67.42
Gene sequence:
>792_bases ATGTTCACCTCTCTTCAAGGGCGCAGCGTGATCGTCACCGGCGCCAGCAAGGGCATCGGTCGCGGCCTCGCGCTGCGCTT CGCCGAGGTCGGCTGCGCCGTTTTGGTGGTGGCGCGCGGCCAGGACGCGGCCGAGGCGGTGGTTGGCGAAATCACCGCCG CCGGCGGCACCGCCCGGGCCTTCGCCGCCGATATCACCAAGGCCGCCGAGACCCGGGCGATGGCCGAGGCCGCCATCGCC GCCTTTGGCGGCATCGATATCCTTTGCGCCAATGCCGGCATCTTCCCCGCCGCCAAGCTGGGAACGATGACCGAGGCCGA TTTCGACGGCGTCATCGACACCAACCTCAAGGGCACCTTCTTAACGGTGTCGGCCTGCCTGGAAGCCCTCAAGGCCAGCG AGGCCGGGCGCATCATCCTGACCTCGTCGATCACCGGCCCGGTCACCGGCTATCCCGGCTGGTCGCATTACGGCGCCAGC AAGGCCGGCCAATTGGGTTTCATGCGCACCGCCGCCATCGAACTGGCGCCCTGGGGCATCACGGTCAACGCCGTGATGCC GGGCAATATCTTCACCGAGGGGTTGGCCGATATGGGCGCCGATTACATCGCCAAGATGGAGGCCTCGGTGCCGATGCGCC GCCTGGGCACGGTCAGCGACATCGCCAATGCCGCCTTGTTCTTCGCCACCAAGGAAGCGGCTTACGTCACCGGCCAGGGC ATGGTGATCGACGGCGGCCAGATCCTGCCCGAATCCCTGGCCGCGCTGGAAGAGATGTCGGCCCATCCCTAA
Upstream 100 bases:
>100_bases CCGTGGCCCTGGCGGCGCGCTGGCTTGAGCAAACGGCCTAAAACCCCACACTCCCCGACCCCTCCCCTCTCCTTTTCCCC CTCTGTCAGGAGCCCTTGCC
Downstream 100 bases:
>100_bases AAACACGAGGGAAAATGACGGGGGCGGCGGACTATCGAGCCCGATAGCCGTTTTTACGCGAGGCCGCCCCCAACCCTTAT CAGCACCTTGAAGAGAGTCT
Product: 3-ketoacyl-(acyl-carrier-protein) reductase
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MFTSLQGRSVIVTGASKGIGRGLALRFAEVGCAVLVVARGQDAAEAVVGEITAAGGTARAFAADITKAAETRAMAEAAIA AFGGIDILCANAGIFPAAKLGTMTEADFDGVIDTNLKGTFLTVSACLEALKASEAGRIILTSSITGPVTGYPGWSHYGAS KAGQLGFMRTAAIELAPWGITVNAVMPGNIFTEGLADMGADYIAKMEASVPMRRLGTVSDIANAALFFATKEAAYVTGQG MVIDGGQILPESLAALEEMSAHP
Sequences:
>Translated_263_residues MFTSLQGRSVIVTGASKGIGRGLALRFAEVGCAVLVVARGQDAAEAVVGEITAAGGTARAFAADITKAAETRAMAEAAIA AFGGIDILCANAGIFPAAKLGTMTEADFDGVIDTNLKGTFLTVSACLEALKASEAGRIILTSSITGPVTGYPGWSHYGAS KAGQLGFMRTAAIELAPWGITVNAVMPGNIFTEGLADMGADYIAKMEASVPMRRLGTVSDIANAALFFATKEAAYVTGQG MVIDGGQILPESLAALEEMSAHP >Mature_263_residues MFTSLQGRSVIVTGASKGIGRGLALRFAEVGCAVLVVARGQDAAEAVVGEITAAGGTARAFAADITKAAETRAMAEAAIA AFGGIDILCANAGIFPAAKLGTMTEADFDGVIDTNLKGTFLTVSACLEALKASEAGRIILTSSITGPVTGYPGWSHYGAS KAGQLGFMRTAAIELAPWGITVNAVMPGNIFTEGLADMGADYIAKMEASVPMRRLGTVSDIANAALFFATKEAAYVTGQG MVIDGGQILPESLAALEEMSAHP
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI15277342, Length=259, Percent_Identity=36.2934362934363, Blast_Score=125, Evalue=5e-29, Organism=Homo sapiens, GI32483357, Length=245, Percent_Identity=31.8367346938775, Blast_Score=122, Evalue=5e-28, Organism=Homo sapiens, GI40254992, Length=235, Percent_Identity=33.6170212765957, Blast_Score=118, Evalue=5e-27, Organism=Homo sapiens, GI4504505, Length=192, Percent_Identity=36.9791666666667, Blast_Score=105, Evalue=3e-23, Organism=Homo sapiens, GI19923817, Length=258, Percent_Identity=27.5193798449612, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI5031737, Length=247, Percent_Identity=30.7692307692308, Blast_Score=102, Evalue=3e-22, Organism=Homo sapiens, GI126723750, Length=249, Percent_Identity=28.9156626506024, Blast_Score=92, Evalue=5e-19, Organism=Homo sapiens, GI10190704, Length=270, Percent_Identity=32.5925925925926, Blast_Score=91, Evalue=9e-19, Organism=Homo sapiens, GI33667109, Length=193, Percent_Identity=33.160621761658, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI126723191, Length=182, Percent_Identity=31.8681318681319, Blast_Score=88, Evalue=8e-18, Organism=Homo sapiens, GI40254986, Length=205, Percent_Identity=31.219512195122, Blast_Score=84, Evalue=9e-17, Organism=Homo sapiens, GI66933014, Length=252, Percent_Identity=27.7777777777778, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI59889578, Length=227, Percent_Identity=27.7533039647577, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI7705925, Length=244, Percent_Identity=27.8688524590164, Blast_Score=76, Evalue=4e-14, Organism=Homo sapiens, GI146231950, Length=208, Percent_Identity=30.7692307692308, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI20149619, Length=198, Percent_Identity=30.8080808080808, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI40807363, Length=169, Percent_Identity=29.585798816568, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI32455239, Length=183, Percent_Identity=32.2404371584699, Blast_Score=71, Evalue=9e-13, Organism=Homo sapiens, GI5031765, Length=183, Percent_Identity=32.2404371584699, Blast_Score=71, Evalue=9e-13, Organism=Homo sapiens, GI142976729, Length=178, Percent_Identity=27.5280898876405, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI4503817, Length=198, Percent_Identity=25.2525252525253, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI4758504, Length=256, Percent_Identity=28.90625, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI7657478, Length=187, Percent_Identity=29.4117647058824, Blast_Score=68, Evalue=9e-12, Organism=Homo sapiens, GI302344755, Length=109, Percent_Identity=37.6146788990826, Blast_Score=66, Evalue=2e-11, Organism=Homo sapiens, GI119392083, Length=268, Percent_Identity=27.2388059701493, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI210032110, Length=179, Percent_Identity=28.4916201117318, Blast_Score=66, Evalue=3e-11, Organism=Escherichia coli, GI1787335, Length=246, Percent_Identity=36.9918699186992, Blast_Score=144, Evalue=5e-36, Organism=Escherichia coli, GI87082100, Length=259, Percent_Identity=34.7490347490347, Blast_Score=140, Evalue=7e-35, Organism=Escherichia coli, GI1787905, Length=251, Percent_Identity=37.0517928286853, Blast_Score=119, Evalue=2e-28, Organism=Escherichia coli, GI1789208, Length=250, Percent_Identity=32.8, Blast_Score=112, Evalue=3e-26, Organism=Escherichia coli, GI1789057, Length=254, Percent_Identity=31.8897637795276, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI87082160, Length=252, Percent_Identity=30.1587301587302, Blast_Score=101, Evalue=5e-23, Organism=Escherichia coli, GI2367175, Length=243, Percent_Identity=33.7448559670782, Blast_Score=100, Evalue=7e-23, Organism=Escherichia coli, GI1788459, Length=243, Percent_Identity=30.8641975308642, Blast_Score=99, Evalue=2e-22, Organism=Escherichia coli, GI1790717, Length=248, Percent_Identity=28.2258064516129, Blast_Score=94, Evalue=7e-21, Organism=Escherichia coli, GI1789378, Length=250, Percent_Identity=29.6, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI2367365, Length=250, Percent_Identity=29.2, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1786812, Length=253, Percent_Identity=27.6679841897233, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI1787526, Length=190, Percent_Identity=29.4736842105263, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1787545, Length=265, Percent_Identity=27.5471698113208, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI1787820, Length=183, Percent_Identity=30.0546448087432, Blast_Score=62, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17555706, Length=245, Percent_Identity=34.2857142857143, Blast_Score=122, Evalue=3e-28, Organism=Caenorhabditis elegans, GI17562910, Length=258, Percent_Identity=34.8837209302326, Blast_Score=120, Evalue=6e-28, Organism=Caenorhabditis elegans, GI25147288, Length=244, Percent_Identity=34.0163934426229, Blast_Score=114, Evalue=4e-26, Organism=Caenorhabditis elegans, GI17560150, Length=273, Percent_Identity=32.2344322344322, Blast_Score=114, Evalue=4e-26, Organism=Caenorhabditis elegans, GI71994600, Length=247, Percent_Identity=29.9595141700405, Blast_Score=107, Evalue=8e-24, Organism=Caenorhabditis elegans, GI17562906, Length=266, Percent_Identity=31.5789473684211, Blast_Score=106, Evalue=1e-23, Organism=Caenorhabditis elegans, GI17562990, Length=273, Percent_Identity=30.7692307692308, Blast_Score=105, Evalue=2e-23, Organism=Caenorhabditis elegans, GI193204405, Length=270, Percent_Identity=30.7407407407407, Blast_Score=104, Evalue=5e-23, Organism=Caenorhabditis elegans, GI17562904, Length=278, Percent_Identity=30.2158273381295, Blast_Score=102, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17562908, Length=267, Percent_Identity=30.3370786516854, Blast_Score=101, Evalue=3e-22, Organism=Caenorhabditis elegans, GI71994604, Length=246, Percent_Identity=28.4552845528455, Blast_Score=100, Evalue=7e-22, Organism=Caenorhabditis elegans, GI17559104, Length=256, Percent_Identity=30.859375, Blast_Score=100, Evalue=8e-22, Organism=Caenorhabditis elegans, GI17560676, Length=248, Percent_Identity=27.4193548387097, Blast_Score=96, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17568967, Length=220, Percent_Identity=33.6363636363636, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17564282, Length=187, Percent_Identity=31.0160427807487, Blast_Score=96, Evalue=3e-20, Organism=Caenorhabditis elegans, GI17531453, Length=270, Percent_Identity=30, Blast_Score=95, Evalue=4e-20, Organism=Caenorhabditis elegans, GI17561402, Length=249, Percent_Identity=28.5140562248996, Blast_Score=94, Evalue=7e-20, Organism=Caenorhabditis elegans, GI17563726, Length=279, Percent_Identity=29.7491039426523, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI71982365, Length=210, Percent_Identity=32.8571428571429, Blast_Score=92, Evalue=4e-19, Organism=Caenorhabditis elegans, GI17538480, Length=269, Percent_Identity=30.1115241635688, Blast_Score=91, Evalue=6e-19, Organism=Caenorhabditis elegans, GI17544670, Length=267, Percent_Identity=29.2134831460674, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17560332, Length=260, Percent_Identity=31.1538461538462, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI72000259, Length=271, Percent_Identity=30.9963099630996, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17560220, Length=265, Percent_Identity=31.3207547169811, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17565030, Length=262, Percent_Identity=30.1526717557252, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI115534694, Length=245, Percent_Identity=28.1632653061224, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17551412, Length=265, Percent_Identity=30.9433962264151, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17536651, Length=259, Percent_Identity=29.3436293436293, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17558628, Length=269, Percent_Identity=28.2527881040892, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI193203115, Length=172, Percent_Identity=28.4883720930233, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI193203117, Length=172, Percent_Identity=28.4883720930233, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17536025, Length=255, Percent_Identity=29.0196078431373, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17538486, Length=257, Percent_Identity=29.1828793774319, Blast_Score=78, Evalue=5e-15, Organism=Caenorhabditis elegans, GI17561272, Length=252, Percent_Identity=31.7460317460317, Blast_Score=78, Evalue=5e-15, Organism=Caenorhabditis elegans, GI17508651, Length=249, Percent_Identity=27.710843373494, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17567345, Length=178, Percent_Identity=28.0898876404494, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17508895, Length=172, Percent_Identity=26.7441860465116, Blast_Score=74, Evalue=9e-14, Organism=Caenorhabditis elegans, GI17507613, Length=198, Percent_Identity=31.3131313131313, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI32563809, Length=198, Percent_Identity=31.3131313131313, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17538182, Length=266, Percent_Identity=27.8195488721804, Blast_Score=64, Evalue=1e-10, Organism=Saccharomyces cerevisiae, GI6324126, Length=265, Percent_Identity=31.6981132075472, Blast_Score=115, Evalue=6e-27, Organism=Saccharomyces cerevisiae, GI6322861, Length=193, Percent_Identity=35.7512953367876, Blast_Score=101, Evalue=2e-22, Organism=Saccharomyces cerevisiae, GI6323882, Length=195, Percent_Identity=31.2820512820513, Blast_Score=72, Evalue=7e-14, Organism=Saccharomyces cerevisiae, GI6322227, Length=200, Percent_Identity=30, Blast_Score=69, Evalue=8e-13, Organism=Drosophila melanogaster, GI21357041, Length=252, Percent_Identity=35.7142857142857, Blast_Score=131, Evalue=6e-31, Organism=Drosophila melanogaster, GI28571526, Length=254, Percent_Identity=34.251968503937, Blast_Score=129, Evalue=2e-30, Organism=Drosophila melanogaster, GI23397609, Length=250, Percent_Identity=35.6, Blast_Score=127, Evalue=1e-29, Organism=Drosophila melanogaster, GI21355319, Length=248, Percent_Identity=30.6451612903226, Blast_Score=120, Evalue=7e-28, Organism=Drosophila melanogaster, GI24644339, Length=249, Percent_Identity=32.5301204819277, Blast_Score=119, Evalue=2e-27, Organism=Drosophila melanogaster, GI18859837, Length=201, Percent_Identity=39.8009950248756, Blast_Score=111, Evalue=5e-25, Organism=Drosophila melanogaster, GI24639444, Length=247, Percent_Identity=33.1983805668016, Blast_Score=109, Evalue=2e-24, Organism=Drosophila melanogaster, GI21357673, Length=253, Percent_Identity=32.0158102766798, Blast_Score=99, Evalue=3e-21, Organism=Drosophila melanogaster, GI24643142, Length=248, Percent_Identity=28.2258064516129, Blast_Score=96, Evalue=3e-20, Organism=Drosophila melanogaster, GI24644337, Length=251, Percent_Identity=29.4820717131474, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI24649181, Length=195, Percent_Identity=29.7435897435897, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI281364892, Length=170, Percent_Identity=30.5882352941176, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24647946, Length=201, Percent_Identity=28.3582089552239, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI24640492, Length=172, Percent_Identity=27.3255813953488, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI28573296, Length=204, Percent_Identity=31.3725490196078, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI45553409, Length=199, Percent_Identity=28.643216080402, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI24647948, Length=199, Percent_Identity=28.643216080402, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI21355631, Length=173, Percent_Identity=26.5895953757225, Blast_Score=71, Evalue=8e-13, Organism=Drosophila melanogaster, GI21358495, Length=196, Percent_Identity=29.0816326530612, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI17737361, Length=254, Percent_Identity=28.740157480315, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24584752, Length=184, Percent_Identity=28.804347826087, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI24581726, Length=195, Percent_Identity=25.6410256410256, Blast_Score=64, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 26740; Mature: 26740
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTSLQGRSVIVTGASKGIGRGLALRFAEVGCAVLVVARGQDAAEAVVGEITAAGGTARA CCCCCCCCEEEEECCCCCCCCHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHCCCCCHHH FAADITKAAETRAMAEAAIAAFGGIDILCANAGIFPAAKLGTMTEADFDGVIDTNLKGTF HHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHCCCCCCCCCCCEEECCCCCCE LTVSACLEALKASEAGRIILTSSITGPVTGYPGWSHYGASKAGQLGFMRTAAIELAPWGI EEHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCE TVNAVMPGNIFTEGLADMGADYIAKMEASVPMRRLGTVSDIANAALFFATKEAAYVTGQG EEEEEECCCHHHHHHHHCCHHHHHHHHHCCCHHHHCCHHHHHHHHEEEEECCCEEEECCC MVIDGGQILPESLAALEEMSAHP EEEECCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MFTSLQGRSVIVTGASKGIGRGLALRFAEVGCAVLVVARGQDAAEAVVGEITAAGGTARA CCCCCCCCEEEEECCCCCCCCHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHCCCCCHHH FAADITKAAETRAMAEAAIAAFGGIDILCANAGIFPAAKLGTMTEADFDGVIDTNLKGTF HHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHCCCCCCCCCCCEEECCCCCCE LTVSACLEALKASEAGRIILTSSITGPVTGYPGWSHYGASKAGQLGFMRTAAIELAPWGI EEHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCE TVNAVMPGNIFTEGLADMGADYIAKMEASVPMRRLGTVSDIANAALFFATKEAAYVTGQG EEEEEECCCHHHHHHHHCCHHHHHHHHHCCCHHHHCCHHHHHHHHEEEEECCCEEEECCC MVIDGGQILPESLAALEEMSAHP EEEECCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA