Definition Rhodospirillum rubrum ATCC 11170 chromosome, complete genome.
Accession NC_007643
Length 4,352,825

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The map label for this gene is yerI [H]

Identifier: 83594346

GI number: 83594346

Start: 3473381

End: 3474382

Strand: Direct

Name: yerI [H]

Synonym: Rru_A3016

Alternate gene names: 83594346

Gene position: 3473381-3474382 (Clockwise)

Preceding gene: 83594341

Following gene: 83594347

Centisome position: 79.8

GC content: 68.06

Gene sequence:

>1002_bases
ATGGCCGCCGAATACGCCCCCGAGGTCGTTGCCGACCTGCAAGCCATGGTTCAGGGCGGCCTGCCCGCCTGGGGCCTGTC
GCCCCACACCGAGGTGACGCTGCTCAATCTTTCGGAAAACGCCACCTTTCGGCTGCGCGACGAGGCGAGCGGCCGCGATC
TGGTGATCCGCCTGCATCGGGTGGGCTATTCCTCGCCCGAGGAGATCCGTTCGGAACTGGCCTGGATCGAGGCCCTGCGC
CGGGAGGAGGTTATCGAAACCGCGCCGCTGGTCGCCGGAACCGATGGTCAGCCGGTGCAGATCCTGCGCTCGCCCGCCGG
GGGCCCGGCCCGTCACGCCGTCGCCTTCGAACGGGTGGCCGGCAAGGAGCCCGAACAGGGCGATGATCTGGTCGGCTGGT
TTCGCGTTCTAGGCGGGGTGACGGCGCGCATGCATGCCCATGCCAAGCGCTGGCGCCGCCCCAAGGGATTCGTCCGCAAG
GTCTGGACGTTCGACGCCATGGTCGGGCCGGCCGGCTATTGGGGCCCCTGGCGGGCCGGCCTTGGCCTGGACAAAGCCGG
AACGGCGGTGATCGAACAGGCCCTGGCCAGGATCGAAGGGCGGGTCGCCCGCCTGGGCATGGGCCCCGAGCGCTTCGGCT
TGGTTCATGCCGATCTGCGGCTGGCCAATCTGCTGGTCGAGGACGACCATCTGCGGGTGATCGATTTCGATGACTGCGGG
CTAAGCTGGTACGTCTATGATTTCGCCGCCGCCATCAGCTTCATCGAACACGAGCCGATCGTGCCCGCCCTGCTTGACGC
CTGGGTCGAGGGTTATCAGGCGGTGGCGCCGCTGTCGGCTGCGGAACTGGCCGAGATCCCGACCTTCATCGTTCTGCGCC
GTATCTTGCTGACCGCCTGGCTGGCCTCCCACGCCGAAATCCCCTTCGCCCGCCAGATGGGCACGACGTTTACCCAGGGC
ACCGTGGCCCTGGCGGCGCGCTGGCTTGAGCAAACGGCCTAA

Upstream 100 bases:

>100_bases
CGATATCTGGACTTTACAACATGAAAGCCACAAAGCATGATGGAAGTCACAGAATTTTAGGGTGACTTGCCCCGTTGCCC
GCGAACCCGGAGAGACTGGG

Downstream 100 bases:

>100_bases
AACCCCACACTCCCCGACCCCTCCCCTCTCCTTTTCCCCCTCTGTCAGGAGCCCTTGCCATGTTCACCTCTCTTCAAGGG
CGCAGCGTGATCGTCACCGG

Product: aminoglycoside phosphotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 332

Protein sequence:

>333_residues
MAAEYAPEVVADLQAMVQGGLPAWGLSPHTEVTLLNLSENATFRLRDEASGRDLVIRLHRVGYSSPEEIRSELAWIEALR
REEVIETAPLVAGTDGQPVQILRSPAGGPARHAVAFERVAGKEPEQGDDLVGWFRVLGGVTARMHAHAKRWRRPKGFVRK
VWTFDAMVGPAGYWGPWRAGLGLDKAGTAVIEQALARIEGRVARLGMGPERFGLVHADLRLANLLVEDDHLRVIDFDDCG
LSWYVYDFAAAISFIEHEPIVPALLDAWVEGYQAVAPLSAAELAEIPTFIVLRRILLTAWLASHAEIPFARQMGTTFTQG
TVALAARWLEQTA

Sequences:

>Translated_333_residues
MAAEYAPEVVADLQAMVQGGLPAWGLSPHTEVTLLNLSENATFRLRDEASGRDLVIRLHRVGYSSPEEIRSELAWIEALR
REEVIETAPLVAGTDGQPVQILRSPAGGPARHAVAFERVAGKEPEQGDDLVGWFRVLGGVTARMHAHAKRWRRPKGFVRK
VWTFDAMVGPAGYWGPWRAGLGLDKAGTAVIEQALARIEGRVARLGMGPERFGLVHADLRLANLLVEDDHLRVIDFDDCG
LSWYVYDFAAAISFIEHEPIVPALLDAWVEGYQAVAPLSAAELAEIPTFIVLRRILLTAWLASHAEIPFARQMGTTFTQG
TVALAARWLEQTA
>Mature_332_residues
AAEYAPEVVADLQAMVQGGLPAWGLSPHTEVTLLNLSENATFRLRDEASGRDLVIRLHRVGYSSPEEIRSELAWIEALRR
EEVIETAPLVAGTDGQPVQILRSPAGGPARHAVAFERVAGKEPEQGDDLVGWFRVLGGVTARMHAHAKRWRRPKGFVRKV
WTFDAMVGPAGYWGPWRAGLGLDKAGTAVIEQALARIEGRVARLGMGPERFGLVHADLRLANLLVEDDHLRVIDFDDCGL
SWYVYDFAAAISFIEHEPIVPALLDAWVEGYQAVAPLSAAELAEIPTFIVLRRILLTAWLASHAEIPFARQMGTTFTQGT
VALAARWLEQTA

Specific function: Unknown

COG id: COG2334

COG function: function code R; Putative homoserine kinase type II (protein kinase fold)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pseudomonas-type thrB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002575
- InterPro:   IPR011009 [H]

Pfam domain/function: PF01636 APH [H]

EC number: NA

Molecular weight: Translated: 36608; Mature: 36477

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: PS00109 PROTEIN_KINASE_TYR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAEYAPEVVADLQAMVQGGLPAWGLSPHTEVTLLNLSENATFRLRDEASGRDLVIRLHR
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCEEEEEEEC
VGYSSPEEIRSELAWIEALRREEVIETAPLVAGTDGQPVQILRSPAGGPARHAVAFERVA
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHEEECCCCCCHHHHHHHHHHC
GKEPEQGDDLVGWFRVLGGVTARMHAHAKRWRRPKGFVRKVWTFDAMVGPAGYWGPWRAG
CCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHCC
LGLDKAGTAVIEQALARIEGRVARLGMGPERFGLVHADLRLANLLVEDDHLRVIDFDDCG
CCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCEEHHHHHHHHHEEECCCEEEEEECCCC
LSWYVYDFAAAISFIEHEPIVPALLDAWVEGYQAVAPLSAAELAEIPTFIVLRRILLTAW
CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
LASHAEIPFARQMGTTFTQGTVALAARWLEQTA
HHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AAEYAPEVVADLQAMVQGGLPAWGLSPHTEVTLLNLSENATFRLRDEASGRDLVIRLHR
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCEEEEEEEC
VGYSSPEEIRSELAWIEALRREEVIETAPLVAGTDGQPVQILRSPAGGPARHAVAFERVA
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHEEECCCCCCHHHHHHHHHHC
GKEPEQGDDLVGWFRVLGGVTARMHAHAKRWRRPKGFVRKVWTFDAMVGPAGYWGPWRAG
CCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHCC
LGLDKAGTAVIEQALARIEGRVARLGMGPERFGLVHADLRLANLLVEDDHLRVIDFDDCG
CCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCEEHHHHHHHHHEEECCCEEEEEECCCC
LSWYVYDFAAAISFIEHEPIVPALLDAWVEGYQAVAPLSAAELAEIPTFIVLRRILLTAW
CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
LASHAEIPFARQMGTTFTQGTVALAARWLEQTA
HHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9701819; 9384377 [H]