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The map label for this gene is dgoR [C]

Identifier: 83594333

GI number: 83594333

Start: 3459992

End: 3460642

Strand: Direct

Name: dgoR [C]

Synonym: Rru_A3003

Alternate gene names: 83594333

Gene position: 3459992-3460642 (Clockwise)

Preceding gene: 83594332

Following gene: 83594335

Centisome position: 79.49

GC content: 64.36

Gene sequence:

>651_bases
GTGTCGGGTGTGACCTATAAGACCGATCAGGCCTATGACCAGCTTGAACGGATGATCGCTTTTCAGGAGTTGAAACCCGG
CACCATGGTTTCCGAATCGACCCTGATGGAGCTTACCGGCTTTGGTCGCACGCCGATCCGCGAGGCGCTTCAGCGCCTAG
CCTGGGAGCGCATGGTCGAGATCCATCCCCGGCGCGGCGCCTTCATTCCCCATATCTTCGTCGAGGTCCAACTGAAGATC
CTCGAGGTCCGTCGCGGGGTCGAGGAACTGGCCGTGCGCCTTGCCGCCCAGCGCGCCGATGCCCTGCAAAAGGCCGATAT
GGGCCGACTGGCCGGCGAGATGGACAAGGTGATCGGCGGCAATGATCTGGTGACCTATGGCGATCTGCTGCGGCGGATCA
ACGAGGCCATCGTCATGGCGGCGCGCAACGACTATCTGCTGCTGGCGATGGCGCCGCTGCAGGGCCTGTCCCGGCGCTTC
TGGTTCGCCAATGTCGGCGACCAACAGGGCGAACTGGCCAAGGCCGCCCGCCTGCATTGCGCCGTCCTTGAGCACATCTG
CCTGGGCGAGGCCGAGGCCGCCGCCCAGGCCTCGCTGGCGCTCAACGACTATCTGACGGATTTCGCCTATCGCACCATCC
GCCGCGCCTAA

Upstream 100 bases:

>100_bases
CCACCCCCCGCCGGCGCCGCTATGCTGGCCAAAAGCCGGGGCAAAGGCTGCACGGCTCACGAAATCCCCATTATTTCCAG
TATTTTGAAGGACCGGACGG

Downstream 100 bases:

>100_bases
GGCAAATCGTCGTCGCGCTCGCGATCAGAGGGCGACACGGAGGGGGGCGCGGCGGATGGGCGCCCGTCAGGCGGCGCGGA
ACTGGTTGTTCTTGCGGGCG

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator GntR Family; Transcriptional Regulator; GntR Family Regulatory Protein; Regulatory Protein GntR HTH; Transcriptional Regulator Protein; Transcriptional Regulator GntR Family Protein; GntR-Family Transcriptional Regulator; GntR Domain-Containing Protein; Transcriptional Regulator GntR; Transcriptional Regulatory Protein; Transcriptional Regulatory Protein GntR Family; Regulatory Protein; Transcriptional Regulator Protein GntR Family; Transcriptional Regulator Gntr Family; FCD Domain Protein

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MSGVTYKTDQAYDQLERMIAFQELKPGTMVSESTLMELTGFGRTPIREALQRLAWERMVEIHPRRGAFIPHIFVEVQLKI
LEVRRGVEELAVRLAAQRADALQKADMGRLAGEMDKVIGGNDLVTYGDLLRRINEAIVMAARNDYLLLAMAPLQGLSRRF
WFANVGDQQGELAKAARLHCAVLEHICLGEAEAAAQASLALNDYLTDFAYRTIRRA

Sequences:

>Translated_216_residues
MSGVTYKTDQAYDQLERMIAFQELKPGTMVSESTLMELTGFGRTPIREALQRLAWERMVEIHPRRGAFIPHIFVEVQLKI
LEVRRGVEELAVRLAAQRADALQKADMGRLAGEMDKVIGGNDLVTYGDLLRRINEAIVMAARNDYLLLAMAPLQGLSRRF
WFANVGDQQGELAKAARLHCAVLEHICLGEAEAAAQASLALNDYLTDFAYRTIRRA
>Mature_215_residues
SGVTYKTDQAYDQLERMIAFQELKPGTMVSESTLMELTGFGRTPIREALQRLAWERMVEIHPRRGAFIPHIFVEVQLKIL
EVRRGVEELAVRLAAQRADALQKADMGRLAGEMDKVIGGNDLVTYGDLLRRINEAIVMAARNDYLLLAMAPLQGLSRRFW
FANVGDQQGELAKAARLHCAVLEHICLGEAEAAAQASLALNDYLTDFAYRTIRRA

Specific function: Repressor For The Dgorkat Operon. Binds D-Galactonate As An Inducer. [C]

COG id: COG1802

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24233; Mature: 24102

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGVTYKTDQAYDQLERMIAFQELKPGTMVSESTLMELTGFGRTPIREALQRLAWERMVE
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
IHPRRGAFIPHIFVEVQLKILEVRRGVEELAVRLAAQRADALQKADMGRLAGEMDKVIGG
HCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NDLVTYGDLLRRINEAIVMAARNDYLLLAMAPLQGLSRRFWFANVGDQQGELAKAARLHC
CCCHHHHHHHHHHHHHHEEEECCCEEEEEECCHHHHHHHHEECCCCCCCHHHHHHHHHHH
AVLEHICLGEAEAAAQASLALNDYLTDFAYRTIRRA
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SGVTYKTDQAYDQLERMIAFQELKPGTMVSESTLMELTGFGRTPIREALQRLAWERMVE
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
IHPRRGAFIPHIFVEVQLKILEVRRGVEELAVRLAAQRADALQKADMGRLAGEMDKVIGG
HCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NDLVTYGDLLRRINEAIVMAARNDYLLLAMAPLQGLSRRFWFANVGDQQGELAKAARLHC
CCCHHHHHHHHHHHHHHEEEECCCEEEEEECCHHHHHHHHEECCCCCCCHHHHHHHHHHH
AVLEHICLGEAEAAAQASLALNDYLTDFAYRTIRRA
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA