| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
Click here to switch to the map view.
The map label for this gene is ackA [H]
Identifier: 83594328
GI number: 83594328
Start: 3452134
End: 3453351
Strand: Reverse
Name: ackA [H]
Synonym: Rru_A2998
Alternate gene names: 83594328
Gene position: 3453351-3452134 (Counterclockwise)
Preceding gene: 83594329
Following gene: 83594327
Centisome position: 79.34
GC content: 68.14
Gene sequence:
>1218_bases ATGATCCATGAGAACTCTCTGATCCTTGTGCTCAACTCCGGCAGTTCATCGCTGAAGTTCGCCCTTTTCGCCGCCGACGC CCGCGAGCCGTTGTGTTCGGGTCTGGCCGAATGCCTGGGCCGCGCCGATGCCCGCCTGACCGTCAAGCGCGACGGCACCA AGGCGGTGACGCCGATGGAAGGCGGCGGCCACGACGTCGCCCTCGGCGCCATCCTCGATATCCTGGCCTCGGCCGATCTG TTGGCGCCGATCCGCGCCGTCGGTCACCGGGTGACCCATGGCGGCGAGCGCTTCCGCGCCTCGGCCCTGATCACCGACGC CGCCCTGGCCGATATCGAAGCCTGCAGCGCGCTCGCCCCCTTGCATAATCCGCCCAATCTGTTGGGCATCCGCATGGCCC GGGCCCGCATGCCCGATGTGCCCCATGTCGCCGTCTTCGATACCTCGTTCCACCAGACCATGCCGCGCGCCGCCTTCATG TACGCCCTGCCGCTGCGCTTCTATGCGAAGTTCGGCGTGCGCCGTTACGGCTTCCACGGCACCAGCCACCGCTTCGTCGC CGCCCAGGCGGTGACGCTGCTCGGCCTTGATCCCGAGGATCACGGTCTGGTCATCGCGCATCTCGGCAATGGCTCCTCGG CCACCGCCGTGCTCGATGGCCGCAGCGTCGACACCACCATGGGCATGACGCCGCTTGAAGGCCTAGTGATGGGCACGCGG TCGGGCGATGTCGATGCCGGGGCGCTCAGCCATATCGCCCGCCAGACCGGTTGGAGCCGCGAAGAGCTTGATGCGGTTCT GAACAAGGAAAGCGGCCTGCTGGGTCTGTCGGGTCTGTCCAACGATTGCCGCACCCTGGAAGCCGCCGCCGAGGACGGCA ACGACGGCGCCCGTCTCGCCCTTGATGTGTTCGTGCACCGGCTGGCCCGCCATATCGGCGGTCTGGCGATGGCCCTGCCG CGTCTTGACGCCGTGGTCTTTACCGGGGGCATCGGCGAAAACTCGTCGCGGCTGCGCGCCGCCACCCTCGAGCGCCTGAA GCCGCTCGGCCTGACCCTGGACGCCGCGGCCAACGAGCGCTGCGTGCGCGGCGTCTCGGGCCGCATCAGCCAGGGGCTTT TTCCCGCCGCCGCGGTCATTCCGACCGACGAGGAATGGATGATCGCCCAGGACACCCTGGATCTGACCTCCGACGAGTCC TTGTCCTGCGTCGCCTAA
Upstream 100 bases:
>100_bases CAGGTCGACGCCGCCCGCGCCCGCTTCGCCGAGCGCGGCTTGAAGGTGTTTTGAAACACCCACCGCGGTCCGTGCCGCTA GCCCCTTTGGGACCACCGAC
Downstream 100 bases:
>100_bases AGCAAATCCCGAGCGATCTGAACCAGATCGCGACGACGATTTGCTTGACTATCAGCCTGTTAGAGCGGTGCGCCGGGACT TTAGGTGTTACATATGCCGC
Product: acetate kinase
Products: NA
Alternate protein names: Acetokinase [H]
Number of amino acids: Translated: 405; Mature: 405
Protein sequence:
>405_residues MIHENSLILVLNSGSSSLKFALFAADAREPLCSGLAECLGRADARLTVKRDGTKAVTPMEGGGHDVALGAILDILASADL LAPIRAVGHRVTHGGERFRASALITDAALADIEACSALAPLHNPPNLLGIRMARARMPDVPHVAVFDTSFHQTMPRAAFM YALPLRFYAKFGVRRYGFHGTSHRFVAAQAVTLLGLDPEDHGLVIAHLGNGSSATAVLDGRSVDTTMGMTPLEGLVMGTR SGDVDAGALSHIARQTGWSREELDAVLNKESGLLGLSGLSNDCRTLEAAAEDGNDGARLALDVFVHRLARHIGGLAMALP RLDAVVFTGGIGENSSRLRAATLERLKPLGLTLDAAANERCVRGVSGRISQGLFPAAAVIPTDEEWMIAQDTLDLTSDES LSCVA
Sequences:
>Translated_405_residues MIHENSLILVLNSGSSSLKFALFAADAREPLCSGLAECLGRADARLTVKRDGTKAVTPMEGGGHDVALGAILDILASADL LAPIRAVGHRVTHGGERFRASALITDAALADIEACSALAPLHNPPNLLGIRMARARMPDVPHVAVFDTSFHQTMPRAAFM YALPLRFYAKFGVRRYGFHGTSHRFVAAQAVTLLGLDPEDHGLVIAHLGNGSSATAVLDGRSVDTTMGMTPLEGLVMGTR SGDVDAGALSHIARQTGWSREELDAVLNKESGLLGLSGLSNDCRTLEAAAEDGNDGARLALDVFVHRLARHIGGLAMALP RLDAVVFTGGIGENSSRLRAATLERLKPLGLTLDAAANERCVRGVSGRISQGLFPAAAVIPTDEEWMIAQDTLDLTSDES LSCVA >Mature_405_residues MIHENSLILVLNSGSSSLKFALFAADAREPLCSGLAECLGRADARLTVKRDGTKAVTPMEGGGHDVALGAILDILASADL LAPIRAVGHRVTHGGERFRASALITDAALADIEACSALAPLHNPPNLLGIRMARARMPDVPHVAVFDTSFHQTMPRAAFM YALPLRFYAKFGVRRYGFHGTSHRFVAAQAVTLLGLDPEDHGLVIAHLGNGSSATAVLDGRSVDTTMGMTPLEGLVMGTR SGDVDAGALSHIARQTGWSREELDAVLNKESGLLGLSGLSNDCRTLEAAAEDGNDGARLALDVFVHRLARHIGGLAMALP RLDAVVFTGGIGENSSRLRAATLERLKPLGLTLDAAANERCVRGVSGRISQGLFPAAAVIPTDEEWMIAQDTLDLTSDES LSCVA
Specific function: Anaerobic degradation of L-threonine to propionate. [C]
COG id: COG0282
COG function: function code C; Acetate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acetokinase family [H]
Homologues:
Organism=Escherichia coli, GI145693184, Length=396, Percent_Identity=51.5151515151515, Blast_Score=370, Evalue=1e-104, Organism=Escherichia coli, GI1788633, Length=399, Percent_Identity=46.1152882205514, Blast_Score=337, Evalue=6e-94,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000890 - InterPro: IPR004372 [H]
Pfam domain/function: PF00871 Acetate_kinase [H]
EC number: =2.7.2.1 [H]
Molecular weight: Translated: 42648; Mature: 42648
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: PS01075 ACETATE_KINASE_1 ; PS01076 ACETATE_KINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIHENSLILVLNSGSSSLKFALFAADAREPLCSGLAECLGRADARLTVKRDGTKAVTPME CCCCCCEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCEEECCCC GGGHDVALGAILDILASADLLAPIRAVGHRVTHGGERFRASALITDAALADIEACSALAP CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC LHNPPNLLGIRMARARMPDVPHVAVFDTSFHQTMPRAAFMYALPLRFYAKFGVRRYGFHG CCCCCCHHHHHHHHHCCCCCCEEEEEECHHHHHCCHHHHHHHHHHHHHHHHCCHHCCCCC TSHRFVAAQAVTLLGLDPEDHGLVIAHLGNGSSATAVLDGRSVDTTMGMTPLEGLVMGTR CCCEEEHEEEEEEEECCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCEEEECC SGDVDAGALSHIARQTGWSREELDAVLNKESGLLGLSGLSNDCRTLEAAAEDGNDGARLA CCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCCCCHHHH LDVFVHRLARHIGGLAMALPRLDAVVFTGGIGENSSRLRAATLERLKPLGLTLDAAANER HHHHHHHHHHHHCHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCHH CVRGVSGRISQGLFPAAAVIPTDEEWMIAQDTLDLTSDESLSCVA HHHCCCCHHHCCCCCCEEECCCCCCEEEEECCCCCCCCCCCEECC >Mature Secondary Structure MIHENSLILVLNSGSSSLKFALFAADAREPLCSGLAECLGRADARLTVKRDGTKAVTPME CCCCCCEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCEEECCCC GGGHDVALGAILDILASADLLAPIRAVGHRVTHGGERFRASALITDAALADIEACSALAP CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC LHNPPNLLGIRMARARMPDVPHVAVFDTSFHQTMPRAAFMYALPLRFYAKFGVRRYGFHG CCCCCCHHHHHHHHHCCCCCCEEEEEECHHHHHCCHHHHHHHHHHHHHHHHCCHHCCCCC TSHRFVAAQAVTLLGLDPEDHGLVIAHLGNGSSATAVLDGRSVDTTMGMTPLEGLVMGTR CCCEEEHEEEEEEEECCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCEEEECC SGDVDAGALSHIARQTGWSREELDAVLNKESGLLGLSGLSNDCRTLEAAAEDGNDGARLA CCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCCCCHHHH LDVFVHRLARHIGGLAMALPRLDAVVFTGGIGENSSRLRAATLERLKPLGLTLDAAANER HHHHHHHHHHHHCHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCHH CVRGVSGRISQGLFPAAAVIPTDEEWMIAQDTLDLTSDESLSCVA HHHCCCCHHHCCCCCCEEECCCCCCEEEEECCCCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 14500782 [H]