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The map label for this gene is 83594307

Identifier: 83594307

GI number: 83594307

Start: 3428133

End: 3428342

Strand: Reverse

Name: 83594307

Synonym: Rru_A2977

Alternate gene names: NA

Gene position: 3428342-3428133 (Counterclockwise)

Preceding gene: 83594308

Following gene: 83594306

Centisome position: 78.76

GC content: 55.71

Gene sequence:

>210_bases
ATGGCTGAAGTTAAGCAAGAAAGCCTCTCCGGGATTACCGAAGGAGAAGCCAAGGAATTTCACAAGATTTTCACGTCCAG
CATCCTGGTGTTCTTTGGCGTCGCCGCCTTCGCTCACCTGCTGGTGTGGATCTGGCGTCCCTGGGTTCCGGGCCCGAACG
GCTACTCGGCCCTCGAGACCCTGACTCAGACTCTGACCTACCTTTCTTAA

Upstream 100 bases:

>100_bases
GGTGGACTTCTTACCGCGGTTCTTCACCGCGGTAGAGCAGCCGTTCCCTGCGCGGATGCAGTGGAATGGTTTTCTGGGCA
AGAATTAGGAGGTAGCACCT

Downstream 100 bases:

>100_bases
GGAGACGGCGATATGTGGCGCATTTGGCAGCTTTTTGATCCGCGTCAGGCTCTCGTCGGTCTGGCCACCTTCTTGTTCGT
TCTGGCTCTGCTGATCCACT

Product: antenna complex, alpha/subunit beta

Products: NA

Alternate protein names: Antenna pigment protein beta chain; LH-1

Number of amino acids: Translated: 69; Mature: 68

Protein sequence:

>69_residues
MAEVKQESLSGITEGEAKEFHKIFTSSILVFFGVAAFAHLLVWIWRPWVPGPNGYSALETLTQTLTYLS

Sequences:

>Translated_69_residues
MAEVKQESLSGITEGEAKEFHKIFTSSILVFFGVAAFAHLLVWIWRPWVPGPNGYSALETLTQTLTYLS
>Mature_68_residues
AEVKQESLSGITEGEAKEFHKIFTSSILVFFGVAAFAHLLVWIWRPWVPGPNGYSALETLTQTLTYLS

Specific function: Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the antena complex beta subunit family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): LHB_RHORT (Q2RQ23)

Other databases:

- EMBL:   M11801
- EMBL:   CP000230
- PIR:   A24206
- RefSeq:   YP_428059.1
- PDB:   1NW0
- PDB:   1WRG
- PDBsum:   1NW0
- PDBsum:   1WRG
- ProteinModelPortal:   Q2RQ23
- SMR:   Q2RQ23
- STRING:   Q2RQ23
- GeneID:   3836422
- GenomeReviews:   CP000230_GR
- KEGG:   rru:Rru_A2977
- NMPDR:   fig|1085.1.peg.619
- eggNOG:   NOG84229
- HOGENOM:   HBG466605
- OMA:   EFHSIFM
- BioCyc:   RRUB269796:RRU_A2977-MONOMER
- InterPro:   IPR000066
- InterPro:   IPR002362
- Gene3D:   G3DSA:1.20.5.250
- PRINTS:   PR00674

Pfam domain/function: PF00556 LHC; SSF56918 Antenna_a/b

EC number: NA

Molecular weight: Translated: 7716; Mature: 7585

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: PS00969 ANTENNA_COMP_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x11d8ecb4)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEVKQESLSGITEGEAKEFHKIFTSSILVFFGVAAFAHLLVWIWRPWVPGPNGYSALET
CCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
LTQTLTYLS
HHHHHHHCH
>Mature Secondary Structure 
AEVKQESLSGITEGEAKEFHKIFTSSILVFFGVAAFAHLLVWIWRPWVPGPNGYSALET
CCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
LTQTLTYLS
HHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3001063; 6434396