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The map label for this gene is pufM [H]

Identifier: 83594304

GI number: 83594304

Start: 3426052

End: 3426972

Strand: Reverse

Name: pufM [H]

Synonym: Rru_A2974

Alternate gene names: 83594304

Gene position: 3426972-3426052 (Counterclockwise)

Preceding gene: 83594305

Following gene: 83594301

Centisome position: 78.73

GC content: 62.43

Gene sequence:

>921_bases
ATGTCGGAATATCAAAATATCCTCACCGGCGTGCAGGTGCGTACCGCGCCCCATTCCGCTCCTATCGCCAAGGGGATTTT
CCCCCGTCTAGGCAAGCCCGGGTTCTCCTACTGGTTGGGTAAGATCGGCGATGCGCAGATCGGCCCCATCTATCTGGGAA
CCACCGGTGTCCTGTCGCTGGTCTTCGGCTTCTTCGCCATCGAGATCATCGGCTTCAACCTGCTGGCCTCTGTGAACTGG
TCGCCGATGGAATTCGGTCGTCAGTTCTTCTGGCTGGGCCTTGAGCCTCCCGCCGCCGAATATGGTCTGGGCTTCGCGCC
CTTGGCCGAGGGTGGCTGGTGGCAGATCGCCGGCTTCTTCCTGACCACCTCGATCCTGCTGTGGTGGGTGCGCATGTATC
GCCGCGCCCGCGCCCTCAAGATGGGCACCCATACCGCTTGGGCCTTCGCTTCGGCGATCTTCCTCTTTCTGTCGCTGGGC
TTCATCCGCCCGCTGCTGATGGGGAACTTCTCCGAGTCCGTGCCCTTCGGGATCTTCCCGCATCTGGAATGGACGAACTC
GTTCTCGCTCAACTACGGGAACTTCTTCTACAACCCGTTCCACATGCTCTCGATCGCCTTCCTGTATGGCTCGGCTCTGC
TGTTCGCCATGCACGGTGCGACCATCCTGGCGGTCTCCCGCCTGGGCGGCGACCGGGAAGTCGAGCAGATCACCGACCGT
GGTACGGCCGCTGAGCGTGCCGCCCTTTTCTGGCGCTGGACCATGGGCTTCAATGCCACCATGGAATCCATCCATCGCTG
GGCTTGGTGGTTCGCCGTTCTCTGCACCTTCACCGGCGCCATCGGCATCCTGCTGACCGGCACCGTGGTCGACAACTGGT
TCGAGTGGGGCGTGAAGCACGGTCTGGCCCCGGCTCCCTGA

Upstream 100 bases:

>100_bases
CATGATCCTCAGCGGCCCGATCTACACCGGGAGCTGGCCTGATTGGTGGCTTTGGTGGCAGAAGCTTCCCTTCTGGAACC
ATGGGTAAGGGGGTACACCG

Downstream 100 bases:

>100_bases
GCCTGAGCTTGATCGCATAGCCTACCGTCCTTGATCGCCTCGCGGCGGAACAGGACCTACGGGGCGGGAATGGTCGAACA
GACCGTTCTCGCCCTGTTGC

Product: photosynthetic reaction center subunit M

Products: NA

Alternate protein names: Photosynthetic reaction center M subunit [H]

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MSEYQNILTGVQVRTAPHSAPIAKGIFPRLGKPGFSYWLGKIGDAQIGPIYLGTTGVLSLVFGFFAIEIIGFNLLASVNW
SPMEFGRQFFWLGLEPPAAEYGLGFAPLAEGGWWQIAGFFLTTSILLWWVRMYRRARALKMGTHTAWAFASAIFLFLSLG
FIRPLLMGNFSESVPFGIFPHLEWTNSFSLNYGNFFYNPFHMLSIAFLYGSALLFAMHGATILAVSRLGGDREVEQITDR
GTAAERAALFWRWTMGFNATMESIHRWAWWFAVLCTFTGAIGILLTGTVVDNWFEWGVKHGLAPAP

Sequences:

>Translated_306_residues
MSEYQNILTGVQVRTAPHSAPIAKGIFPRLGKPGFSYWLGKIGDAQIGPIYLGTTGVLSLVFGFFAIEIIGFNLLASVNW
SPMEFGRQFFWLGLEPPAAEYGLGFAPLAEGGWWQIAGFFLTTSILLWWVRMYRRARALKMGTHTAWAFASAIFLFLSLG
FIRPLLMGNFSESVPFGIFPHLEWTNSFSLNYGNFFYNPFHMLSIAFLYGSALLFAMHGATILAVSRLGGDREVEQITDR
GTAAERAALFWRWTMGFNATMESIHRWAWWFAVLCTFTGAIGILLTGTVVDNWFEWGVKHGLAPAP
>Mature_305_residues
SEYQNILTGVQVRTAPHSAPIAKGIFPRLGKPGFSYWLGKIGDAQIGPIYLGTTGVLSLVFGFFAIEIIGFNLLASVNWS
PMEFGRQFFWLGLEPPAAEYGLGFAPLAEGGWWQIAGFFLTTSILLWWVRMYRRARALKMGTHTAWAFASAIFLFLSLGF
IRPLLMGNFSESVPFGIFPHLEWTNSFSLNYGNFFYNPFHMLSIAFLYGSALLFAMHGATILAVSRLGGDREVEQITDRG
TAAERAALFWRWTMGFNATMESIHRWAWWFAVLCTFTGAIGILLTGTVVDNWFEWGVKHGLAPAP

Specific function: The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular chromatophore membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the reaction center pufL/M/psbA/D family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000484
- InterPro:   IPR005781 [H]

Pfam domain/function: PF00124 Photo_RC [H]

EC number: NA

Molecular weight: Translated: 34209; Mature: 34078

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: PS00244 REACTION_CENTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEYQNILTGVQVRTAPHSAPIAKGIFPRLGKPGFSYWLGKIGDAQIGPIYLGTTGVLSL
CCHHHHHHHCCEEEECCCCCCHHHHHHHHCCCCCHHHHHHCCCCCCCCCEEECHHHHHHH
VFGFFAIEIIGFNLLASVNWSPMEFGRQFFWLGLEPPAAEYGLGFAPLAEGGWWQIAGFF
HHHHHHHHHHHHHHHHCCCCCHHHHCCEEEEEECCCCHHHHCCCCCCCCCCCHHHHHHHH
LTTSILLWWVRMYRRARALKMGTHTAWAFASAIFLFLSLGFIRPLLMGNFSESVPFGIFP
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
HLEWTNSFSLNYGNFFYNPFHMLSIAFLYGSALLFAMHGATILAVSRLGGDREVEQITDR
CCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHCC
GTAAERAALFWRWTMGFNATMESIHRWAWWFAVLCTFTGAIGILLTGTVVDNWFEWGVKH
CCHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLAPAP
CCCCCC
>Mature Secondary Structure 
SEYQNILTGVQVRTAPHSAPIAKGIFPRLGKPGFSYWLGKIGDAQIGPIYLGTTGVLSL
CHHHHHHHCCEEEECCCCCCHHHHHHHHCCCCCHHHHHHCCCCCCCCCEEECHHHHHHH
VFGFFAIEIIGFNLLASVNWSPMEFGRQFFWLGLEPPAAEYGLGFAPLAEGGWWQIAGFF
HHHHHHHHHHHHHHHHCCCCCHHHHCCEEEEEECCCCHHHHCCCCCCCCCCCHHHHHHHH
LTTSILLWWVRMYRRARALKMGTHTAWAFASAIFLFLSLGFIRPLLMGNFSESVPFGIFP
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
HLEWTNSFSLNYGNFFYNPFHMLSIAFLYGSALLFAMHGATILAVSRLGGDREVEQITDR
CCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHCC
GTAAERAALFWRWTMGFNATMESIHRWAWWFAVLCTFTGAIGILLTGTVVDNWFEWGVKH
CCHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLAPAP
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2836391; 6199280 [H]