| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594275
Identifier: 83594275
GI number: 83594275
Start: 3392080
End: 3393270
Strand: Reverse
Name: 83594275
Synonym: Rru_A2943
Alternate gene names: NA
Gene position: 3393270-3392080 (Counterclockwise)
Preceding gene: 83594276
Following gene: 83594274
Centisome position: 77.96
GC content: 64.15
Gene sequence:
>1191_bases ATGATCATCCATACGCTGCACCGCTATATCCTGCGCAACCTGCTCGTCGGCCTCGCCGTGGGGTCGGTGGCCTTGATCGT GTTGATCTGGCTGATCAATTCCCTGAAGTTCCTCGATTGGTTCGTCAACAAGGGGCTGTCGGTCGCCACCTTCCTGCGCC TGACCCTGCTGCTGATGCCGGGCTTCCTCACGGTCTTCATTCCCATCGCCTTGTTCGCCGTGGTGCTGTTCACCTACAAC CGGCTGGCCGCCGACCGCGAACTGATCGTCATGCGCGCCGCCGGCATGGGGCCCTGGCAATTGGCCCGCCCGGCCCTGGC GCTCTGCGCCGTGCTGACCGGGGTGGGCTATTGGCTGACGCTGTCGGTGGTGCCAGCGATGGAAGGGGCCTTCGAGGCGA TCAAATACGAGGTGCGCGGCGAGGTTTCGAGCTTGGTCATCAAGGAAGGCCAGTTCAATCAGATGAAGGACGGGCTGATC GTTTACGCCGGTGAACGGGCCAAGGACGGCCGGCTGATCGATCTGATGATCCACGATACCACCGGCAAGACCAGCGATCT GACGGTGATGGCCGAAAGCGGCGCCCTGGTGCGCGAAGGCGAGGGCGCGCGCATCTTGCTGATCAATGGCAACCGCCAGG AACGCAACCGCCAGACCGGTAAGGTCAATTTCCTGTATTTTGACAGCTATGCCGTGGATCTGGGCGGCAAGGCGGCAAGC ACCGAAATGCGCTTTCGCGAGGAACGCGAAAGGCCGCTGTCGGAGCTGATTTCGCTCAAGGCCGGCGATCGCATCGATCC CGATTATCCCTTTACCTATGAAGAGCGCCATATCCGGCGCATGCGCATGGAGGCCCACCTGCGGCTGTTGCGGCCTTTGG CCCATATCGGCTTCCTGCTGATCGGTCTGGCCGCCGTGCTGACCGGCGAGTTTGATCGGCGCGGCGGCAATAAGCGGGTG ATTTTGGCCGTCGCCCTGGTCGTGCTGTTCCAGGCCGGTAGCCTGGGGGCGGCGACGGTGGCCAAGAAATCCCTTGATGG CCTGCTGCTGCTTGATCTGATGACGCTTCTGCCGATCCTCGTCGGCTGGATCTGGCTGGTCTGGCCTTCCGAGCGCTGGG GGCGGCGGCGGCTGGCGCCACGGCGCGGGCGGACGGCGGCCCCGGCCCTGGGCGGCGGAGCGGGACGATGA
Upstream 100 bases:
>100_bases GGAACTGGCTTGACCTTCTCGCCCCCGGCCGTTACCCCCTGACACGCGCCGGGATGATGGCCCCGGGACTTTTGTTTGGG CCCTGGGATATCGGGAACCG
Downstream 100 bases:
>100_bases TGACGACCCGGACGGCGCGCGAGGCGGGTGAGGCCGAGGCGGCGGGGCCATCGACCCTGCGGCTGGTCGGCCGGCTGATC AAGGATCATCTGGCCCAGCA
Product: permease YjgP/YjgQ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 396; Mature: 396
Protein sequence:
>396_residues MIIHTLHRYILRNLLVGLAVGSVALIVLIWLINSLKFLDWFVNKGLSVATFLRLTLLLMPGFLTVFIPIALFAVVLFTYN RLAADRELIVMRAAGMGPWQLARPALALCAVLTGVGYWLTLSVVPAMEGAFEAIKYEVRGEVSSLVIKEGQFNQMKDGLI VYAGERAKDGRLIDLMIHDTTGKTSDLTVMAESGALVREGEGARILLINGNRQERNRQTGKVNFLYFDSYAVDLGGKAAS TEMRFREERERPLSELISLKAGDRIDPDYPFTYEERHIRRMRMEAHLRLLRPLAHIGFLLIGLAAVLTGEFDRRGGNKRV ILAVALVVLFQAGSLGAATVAKKSLDGLLLLDLMTLLPILVGWIWLVWPSERWGRRRLAPRRGRTAAPALGGGAGR
Sequences:
>Translated_396_residues MIIHTLHRYILRNLLVGLAVGSVALIVLIWLINSLKFLDWFVNKGLSVATFLRLTLLLMPGFLTVFIPIALFAVVLFTYN RLAADRELIVMRAAGMGPWQLARPALALCAVLTGVGYWLTLSVVPAMEGAFEAIKYEVRGEVSSLVIKEGQFNQMKDGLI VYAGERAKDGRLIDLMIHDTTGKTSDLTVMAESGALVREGEGARILLINGNRQERNRQTGKVNFLYFDSYAVDLGGKAAS TEMRFREERERPLSELISLKAGDRIDPDYPFTYEERHIRRMRMEAHLRLLRPLAHIGFLLIGLAAVLTGEFDRRGGNKRV ILAVALVVLFQAGSLGAATVAKKSLDGLLLLDLMTLLPILVGWIWLVWPSERWGRRRLAPRRGRTAAPALGGGAGR >Mature_396_residues MIIHTLHRYILRNLLVGLAVGSVALIVLIWLINSLKFLDWFVNKGLSVATFLRLTLLLMPGFLTVFIPIALFAVVLFTYN RLAADRELIVMRAAGMGPWQLARPALALCAVLTGVGYWLTLSVVPAMEGAFEAIKYEVRGEVSSLVIKEGQFNQMKDGLI VYAGERAKDGRLIDLMIHDTTGKTSDLTVMAESGALVREGEGARILLINGNRQERNRQTGKVNFLYFDSYAVDLGGKAAS TEMRFREERERPLSELISLKAGDRIDPDYPFTYEERHIRRMRMEAHLRLLRPLAHIGFLLIGLAAVLTGEFDRRGGNKRV ILAVALVVLFQAGSLGAATVAKKSLDGLLLLDLMTLLPILVGWIWLVWPSERWGRRRLAPRRGRTAAPALGGGAGR
Specific function: Unknown
COG id: COG0795
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005495 [H]
Pfam domain/function: PF03739 YjgP_YjgQ [H]
EC number: NA
Molecular weight: Translated: 43957; Mature: 43957
Theoretical pI: Translated: 10.57; Mature: 10.57
Prosite motif: PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIHTLHRYILRNLLVGLAVGSVALIVLIWLINSLKFLDWFVNKGLSVATFLRLTLLLMP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH GFLTVFIPIALFAVVLFTYNRLAADRELIVMRAAGMGPWQLARPALALCAVLTGVGYWLT HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCHHHHH LSVVPAMEGAFEAIKYEVRGEVSSLVIKEGQFNQMKDGLIVYAGERAKDGRLIDLMIHDT HHHHHHHHHHHHHHHHHHHCCHHHHEECCCCCCCCCCCEEEEECCCCCCCCEEEEEEECC TGKTSDLTVMAESGALVREGEGARILLINGNRQERNRQTGKVNFLYFDSYAVDLGGKAAS CCCCCCEEEEECCCCEEECCCCCEEEEEECCCHHHCCCCCEEEEEEEECEEEECCCCCCH TEMRFREERERPLSELISLKAGDRIDPDYPFTYEERHIRRMRMEAHLRLLRPLAHIGFLL HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGLAAVLTGEFDRRGGNKRVILAVALVVLFQAGSLGAATVAKKSLDGLLLLDLMTLLPIL HHHHHHHHCCHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHH VGWIWLVWPSERWGRRRLAPRRGRTAAPALGGGAGR HHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIIHTLHRYILRNLLVGLAVGSVALIVLIWLINSLKFLDWFVNKGLSVATFLRLTLLLMP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH GFLTVFIPIALFAVVLFTYNRLAADRELIVMRAAGMGPWQLARPALALCAVLTGVGYWLT HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCHHHHH LSVVPAMEGAFEAIKYEVRGEVSSLVIKEGQFNQMKDGLIVYAGERAKDGRLIDLMIHDT HHHHHHHHHHHHHHHHHHHCCHHHHEECCCCCCCCCCCEEEEECCCCCCCCEEEEEEECC TGKTSDLTVMAESGALVREGEGARILLINGNRQERNRQTGKVNFLYFDSYAVDLGGKAAS CCCCCCEEEEECCCCEEECCCCCEEEEEECCCHHHCCCCCEEEEEEEECEEEECCCCCCH TEMRFREERERPLSELISLKAGDRIDPDYPFTYEERHIRRMRMEAHLRLLRPLAHIGFLL HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGLAAVLTGEFDRRGGNKRVILAVALVVLFQAGSLGAATVAKKSLDGLLLLDLMTLLPIL HHHHHHHHCCHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHH VGWIWLVWPSERWGRRRLAPRRGRTAAPALGGGAGR HHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]