| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594271
Identifier: 83594271
GI number: 83594271
Start: 3387480
End: 3388535
Strand: Reverse
Name: 83594271
Synonym: Rru_A2939
Alternate gene names: NA
Gene position: 3388535-3387480 (Counterclockwise)
Preceding gene: 83594274
Following gene: 83594270
Centisome position: 77.85
GC content: 72.35
Gene sequence:
>1056_bases ATGAAGATCGCCATCGCCGACGCCGGTCCCGCCTTTGACGGGACCTCGCCCGAAGCGCGCCCTTTGGACGGCGCGGCCCG GGCGGTCTGCGGTCTGGCCGCCGCCCTGGCCGGGCGTGGCCATCGCGTCAGCGTCCATAATTCCTGCGCCCAGGCGGTCG AGGTGGCCGGGGTGTCCTGGCGGCCGCTGCCGGTCGGCTGGCAGGGTGGCAAAGAGGGCGCGCGCCTGGAGGATGTCGAG GCGCTGATCGCCATCGATCAGCCGGCCCTGCTTGATCTGGCCGAGGGGCCGGCGGTGCGGCGCATTCTGCTGCCCTTCGC CGCGCCCGGTCCGTTGGCTTGGCCGCTGGCCCGCGATCCGATCGAACGCCATCAGCCGCTGACCGCCTATCTCGGCCTGA CCCAGCGCACCGCCGCTCCCCTGTTGCCCGGGCATTCGACGGTGATCGCGCCCGGCGTTTCGGGCGCTTTCCGGCCGCGG ATCGGCCAGGGGCCCAGTGATCCGCCGGTCGCCGTGGTCACCACCCATCCGTTGCATGGCCTGGATTGGCTGCTCGACCT GTGGGAGGACGTGATCGTCCGCGAGGTGCCCGCCGCCCGGCTGCATGTCTATTCGGCGCTGCTCCACCGGGCGCTGGGCG GCGAGGTCATGCCCGGCGCCCTGTCCCGGCTGACCGACCGCGTGCGCGGGCTGGCCGGGCGCGGCGTCGAGGTTCGCGCG CCCTTGGGCGAAACGGCGATGGCGGCGGTTTATCGCGCCGCCACCCTTCATCTTTACCCCGGTCATGTCGATGACATGAC CTGCTGGACCCTGGCTGAGTCGCAGGCCTGCGGCCTTCCCGCCGTGGCCCGCGCCCTGGGCGCCACCAGCGAGCGGCTGG TCAACGGCGAGACGGGCTATCTGGTCCCCGACGGGGCGGCCTTCGCCAATGTCGCCGTGCAGATCCTAGTTGAACCGGCG GTGCGGCGCAGTCTGTCGGCCGCCGCCGCCGACCCGGGGCGGCTGCGCCCCTGGGAAGCCGTGGCCCTTGATATCGACCG TATTTTAACCGCCTGA
Upstream 100 bases:
>100_bases GTTGGCAAGCCGGGGGGTGGGGGGGTATAAGGTCAGAACCACCGCCGGGACTTTATCATCCCTTTTTCCTGCCCGCGATG CCCGCCGTTTTGGAGCCGCC
Downstream 100 bases:
>100_bases GTTTTCTCCTCCGGCGCCCCCTGCCGGGTCGCCTGATTTTCCTTTTCTTCCCGGTGATTTATCGGAGTCCCCATGGGTTT GCGCATTCTTCAAGTCATGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 351; Mature: 351
Protein sequence:
>351_residues MKIAIADAGPAFDGTSPEARPLDGAARAVCGLAAALAGRGHRVSVHNSCAQAVEVAGVSWRPLPVGWQGGKEGARLEDVE ALIAIDQPALLDLAEGPAVRRILLPFAAPGPLAWPLARDPIERHQPLTAYLGLTQRTAAPLLPGHSTVIAPGVSGAFRPR IGQGPSDPPVAVVTTHPLHGLDWLLDLWEDVIVREVPAARLHVYSALLHRALGGEVMPGALSRLTDRVRGLAGRGVEVRA PLGETAMAAVYRAATLHLYPGHVDDMTCWTLAESQACGLPAVARALGATSERLVNGETGYLVPDGAAFANVAVQILVEPA VRRSLSAAAADPGRLRPWEAVALDIDRILTA
Sequences:
>Translated_351_residues MKIAIADAGPAFDGTSPEARPLDGAARAVCGLAAALAGRGHRVSVHNSCAQAVEVAGVSWRPLPVGWQGGKEGARLEDVE ALIAIDQPALLDLAEGPAVRRILLPFAAPGPLAWPLARDPIERHQPLTAYLGLTQRTAAPLLPGHSTVIAPGVSGAFRPR IGQGPSDPPVAVVTTHPLHGLDWLLDLWEDVIVREVPAARLHVYSALLHRALGGEVMPGALSRLTDRVRGLAGRGVEVRA PLGETAMAAVYRAATLHLYPGHVDDMTCWTLAESQACGLPAVARALGATSERLVNGETGYLVPDGAAFANVAVQILVEPA VRRSLSAAAADPGRLRPWEAVALDIDRILTA >Mature_351_residues MKIAIADAGPAFDGTSPEARPLDGAARAVCGLAAALAGRGHRVSVHNSCAQAVEVAGVSWRPLPVGWQGGKEGARLEDVE ALIAIDQPALLDLAEGPAVRRILLPFAAPGPLAWPLARDPIERHQPLTAYLGLTQRTAAPLLPGHSTVIAPGVSGAFRPR IGQGPSDPPVAVVTTHPLHGLDWLLDLWEDVIVREVPAARLHVYSALLHRALGGEVMPGALSRLTDRVRGLAGRGVEVRA PLGETAMAAVYRAATLHLYPGHVDDMTCWTLAESQACGLPAVARALGATSERLVNGETGYLVPDGAAFANVAVQILVEPA VRRSLSAAAADPGRLRPWEAVALDIDRILTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36689; Mature: 36689
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: PS00041 HTH_ARAC_FAMILY_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIAIADAGPAFDGTSPEARPLDGAARAVCGLAAALAGRGHRVSVHNSCAQAVEVAGVSW CEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCC RPLPVGWQGGKEGARLEDVEALIAIDQPALLDLAEGPAVRRILLPFAAPGPLAWPLARDP CCCCCCCCCCCCCCCHHHHHEEEEECCCHHEECCCCCHHHHHEECCCCCCCCCCCCCCCC IERHQPLTAYLGLTQRTAAPLLPGHSTVIAPGVSGAFRPRIGQGPSDPPVAVVTTHPLHG HHHCCCEEEECCCHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCH LDWLLDLWEDVIVREVPAARLHVYSALLHRALGGEVMPGALSRLTDRVRGLAGRGVEVRA HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEC PLGETAMAAVYRAATLHLYPGHVDDMTCWTLAESQACGLPAVARALGATSERLVNGETGY CCCHHHHHHHHHHHEEEEECCCCCCCEEEEECCCCCCCCHHHHHHHCCCHHHHCCCCCCE LVPDGAAFANVAVQILVEPAVRRSLSAAAADPGRLRPWEAVALDIDRILTA EECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MKIAIADAGPAFDGTSPEARPLDGAARAVCGLAAALAGRGHRVSVHNSCAQAVEVAGVSW CEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCC RPLPVGWQGGKEGARLEDVEALIAIDQPALLDLAEGPAVRRILLPFAAPGPLAWPLARDP CCCCCCCCCCCCCCCHHHHHEEEEECCCHHEECCCCCHHHHHEECCCCCCCCCCCCCCCC IERHQPLTAYLGLTQRTAAPLLPGHSTVIAPGVSGAFRPRIGQGPSDPPVAVVTTHPLHG HHHCCCEEEECCCHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCH LDWLLDLWEDVIVREVPAARLHVYSALLHRALGGEVMPGALSRLTDRVRGLAGRGVEVRA HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEC PLGETAMAAVYRAATLHLYPGHVDDMTCWTLAESQACGLPAVARALGATSERLVNGETGY CCCHHHHHHHHHHHEEEEECCCCCCCEEEEECCCCCCCCHHHHHHHCCCHHHHCCCCCCE LVPDGAAFANVAVQILVEPAVRRSLSAAAADPGRLRPWEAVALDIDRILTA EECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA