| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594265
Identifier: 83594265
GI number: 83594265
Start: 3378807
End: 3379370
Strand: Direct
Name: 83594265
Synonym: Rru_A2933
Alternate gene names: NA
Gene position: 3378807-3379370 (Clockwise)
Preceding gene: 83594262
Following gene: 83594272
Centisome position: 77.62
GC content: 67.02
Gene sequence:
>564_bases ATGGACTCCCAGCAGAACATTGATCTCGGCGGCACCGCTTTGGCGGCGCAGGCTTATGCGCCCCCCCGGATCGAACCGGC GGCCCCTCTACCGACCGAGGACGCGGTGGCCCCCAGCGGGGCGACGGCGACCCGGCAGGAAAGCCGGCGGCCCAACGGCG ATGGTCCCTTGCTCAACCCGCGCATGATTCTCGACCCCAAGCTTTATGTGAACGTCGCCAAATACTCCTTTAACAACGGA AGCGTGCAATTCCAGGTTCCTTCCCGCGACCAGCTTGAGGCCTATCAACGCAATCAGGACGCTCAGGCCACGGTGGTCCA AGCCGAGAAGGTCGAAGTCACCGACCGCAAGGTGGTTGAAAAGACCAGCGAGGTTCAGCAGGTCACCGACGGCGAAGGGC CGGCCGAGACCCAGGCTTCGGGCATAGTCGCCGCCTCGGTCGTCAGCCAGACCACCACGGTCGATCCGTCGGGCGCCTCC CGCGCCGATACCGGTCGCCCGGCGGCGGCCGCCGCCCCCCGGCAGGTCAGCGCGCCCGGACAGACCGTGGAACTGGAGGC GTAA
Upstream 100 bases:
>100_bases AGTACATTCATTGGGTTACCTTTGAGCGCAGCGACTTGTTGTCAAAGCGCCCGCCCCAAGAGCATGATCATGGTCAGATA TCTTTGGAGGGCAGAAGGCC
Downstream 100 bases:
>100_bases AAGCCGATCAAGGCACCCCGGCCCGATGTGGGCCGCCTTGACCTTGCGGTTTTCCTGTTTTTCTCCGTTTTTAGCCCCTC GCGCGAACTTCGCGCGGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MDSQQNIDLGGTALAAQAYAPPRIEPAAPLPTEDAVAPSGATATRQESRRPNGDGPLLNPRMILDPKLYVNVAKYSFNNG SVQFQVPSRDQLEAYQRNQDAQATVVQAEKVEVTDRKVVEKTSEVQQVTDGEGPAETQASGIVAASVVSQTTTVDPSGAS RADTGRPAAAAAPRQVSAPGQTVELEA
Sequences:
>Translated_187_residues MDSQQNIDLGGTALAAQAYAPPRIEPAAPLPTEDAVAPSGATATRQESRRPNGDGPLLNPRMILDPKLYVNVAKYSFNNG SVQFQVPSRDQLEAYQRNQDAQATVVQAEKVEVTDRKVVEKTSEVQQVTDGEGPAETQASGIVAASVVSQTTTVDPSGAS RADTGRPAAAAAPRQVSAPGQTVELEA >Mature_187_residues MDSQQNIDLGGTALAAQAYAPPRIEPAAPLPTEDAVAPSGATATRQESRRPNGDGPLLNPRMILDPKLYVNVAKYSFNNG SVQFQVPSRDQLEAYQRNQDAQATVVQAEKVEVTDRKVVEKTSEVQQVTDGEGPAETQASGIVAASVVSQTTTVDPSGAS RADTGRPAAAAAPRQVSAPGQTVELEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19581; Mature: 19581
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSQQNIDLGGTALAAQAYAPPRIEPAAPLPTEDAVAPSGATATRQESRRPNGDGPLLNP CCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCC RMILDPKLYVNVAKYSFNNGSVQFQVPSRDQLEAYQRNQDAQATVVQAEKVEVTDRKVVE EEEECCEEEEEEEEEECCCCEEEEECCCCHHHHHHHCCCCCCEEEEEEEEEECHHHHHHH KTSEVQQVTDGEGPAETQASGIVAASVVSQTTTVDPSGASRADTGRPAAAAAPRQVSAPG HHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCC QTVELEA CEEEECC >Mature Secondary Structure MDSQQNIDLGGTALAAQAYAPPRIEPAAPLPTEDAVAPSGATATRQESRRPNGDGPLLNP CCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCC RMILDPKLYVNVAKYSFNNGSVQFQVPSRDQLEAYQRNQDAQATVVQAEKVEVTDRKVVE EEEECCEEEEEEEEEECCCCEEEEECCCCHHHHHHHCCCCCCEEEEEEEEEECHHHHHHH KTSEVQQVTDGEGPAETQASGIVAASVVSQTTTVDPSGASRADTGRPAAAAAPRQVSAPG HHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCC QTVELEA CEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA