| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594251
Identifier: 83594251
GI number: 83594251
Start: 3360918
End: 3361457
Strand: Reverse
Name: 83594251
Synonym: Rru_A2919
Alternate gene names: NA
Gene position: 3361457-3360918 (Counterclockwise)
Preceding gene: 83594252
Following gene: 83594249
Centisome position: 77.22
GC content: 57.22
Gene sequence:
>540_bases ATGCCATTTTGCACAAAACTCCGCGTTTTGAGAGGCGGGATGCATCGGCGCCGGGGGGCTTTTAGGCGAAAGGCATGCAA ACACATCGCTTTTTTTCTGGCATGGGGGTTGCTTCCTGAGCGGTGTGCTTCTTCCCAACGTGCCCCGAGCGGCCCGGTCT CCCCCCAGGGAGCCGGGCCGTTGTTTTATGTCGGGTGGCTTGTCATCACTCCGTTTGAACGCGCGTTTGACTTGGTACGA TCGCGAGACAATAGGGCGTTAACGGAAGGATCAAGGAGGCCTGGAATGGATATTTTGGCTAAGTCCGTCACGTTCCATGA AAACCGCATGTGGCTGGACCTTTCCGATGGTCGGACCCTGGGTATTCCCCTTTCCTGGTTTCCCCGCCTGCTGAAGGCGA CACCTGAACAACGCCAGGGTTTCGAGATCGGTTCGTGGGAGATCCATTGGGAAGCGATTGATGAAGACATCTTGATCGCC GGCCTTCTCGCTGGGCTGGGGGATCAGACGAAACGGGGCCGCTTGGTGAACGCGCTTTGA
Upstream 100 bases:
>100_bases CGCCCCCCGCCTGTTTGGCGACCCGCGCGGCCTGTCAGCCCTGGTCAGCTTCCTGGCCGACGGCCCGCCCTCGGCCGAGG CGCGGCCGAAAGCTTAAGTC
Downstream 100 bases:
>100_bases GTTAGGTGTTCGCGTCCTCCGCCGCCCTCAGGATCTCGGTGACATCACAACCCTAATGACATTACCGGCACTCGTTTTTG TCTCTGAGAGCGTCTCTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MPFCTKLRVLRGGMHRRRGAFRRKACKHIAFFLAWGLLPERCASSQRAPSGPVSPQGAGPLFYVGWLVITPFERAFDLVR SRDNRALTEGSRRPGMDILAKSVTFHENRMWLDLSDGRTLGIPLSWFPRLLKATPEQRQGFEIGSWEIHWEAIDEDILIA GLLAGLGDQTKRGRLVNAL
Sequences:
>Translated_179_residues MPFCTKLRVLRGGMHRRRGAFRRKACKHIAFFLAWGLLPERCASSQRAPSGPVSPQGAGPLFYVGWLVITPFERAFDLVR SRDNRALTEGSRRPGMDILAKSVTFHENRMWLDLSDGRTLGIPLSWFPRLLKATPEQRQGFEIGSWEIHWEAIDEDILIA GLLAGLGDQTKRGRLVNAL >Mature_178_residues PFCTKLRVLRGGMHRRRGAFRRKACKHIAFFLAWGLLPERCASSQRAPSGPVSPQGAGPLFYVGWLVITPFERAFDLVRS RDNRALTEGSRRPGMDILAKSVTFHENRMWLDLSDGRTLGIPLSWFPRLLKATPEQRQGFEIGSWEIHWEAIDEDILIAG LLAGLGDQTKRGRLVNAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20210; Mature: 20079
Theoretical pI: Translated: 11.16; Mature: 11.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFCTKLRVLRGGMHRRRGAFRRKACKHIAFFLAWGLLPERCASSQRAPSGPVSPQGAGP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCC LFYVGWLVITPFERAFDLVRSRDNRALTEGSRRPGMDILAKSVTFHENRMWLDLSDGRTL CEEEHHHHHCCHHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHEEECCEEEEECCCCCEE GIPLSWFPRLLKATPEQRQGFEIGSWEIHWEAIDEDILIAGLLAGLGDQTKRGRLVNAL CCCHHHHHHHHHCCCCHHCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCEECCCC >Mature Secondary Structure PFCTKLRVLRGGMHRRRGAFRRKACKHIAFFLAWGLLPERCASSQRAPSGPVSPQGAGP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCC LFYVGWLVITPFERAFDLVRSRDNRALTEGSRRPGMDILAKSVTFHENRMWLDLSDGRTL CEEEHHHHHCCHHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHEEECCEEEEECCCCCEE GIPLSWFPRLLKATPEQRQGFEIGSWEIHWEAIDEDILIAGLLAGLGDQTKRGRLVNAL CCCHHHHHHHHHCCCCHHCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA