| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
Click here to switch to the map view.
The map label for this gene is baeS [H]
Identifier: 83594246
GI number: 83594246
Start: 3356837
End: 3358438
Strand: Direct
Name: baeS [H]
Synonym: Rru_A2914
Alternate gene names: 83594246
Gene position: 3356837-3358438 (Clockwise)
Preceding gene: 83594245
Following gene: 83594247
Centisome position: 77.12
GC content: 70.16
Gene sequence:
>1602_bases ATGGCTCTTAAGCTTCCCCGCCGGCTGCTGCCGCGCAGCACCACCTTACGCATCGCGCTTAGTTTCCTCGTGTTGTTTGG CGGAGCCTCGGGCCTGCTGATGGCCGGGGTCTATTGGACGACCTCGCGCTTCCTGATGTTTCAGGTCGATGGGGTGATCG GCGACGATATCGCCCTGCTGACCAATGCCGCCCGCGAACGTGGCCACCGCTTGCTGGCCGCCATGCTGGTCACCCGCGCC CGTCAGGCCGGCGAGGCCCAGGCGGTTTACCTGCTTGCCGATCAGGACGGCGAACCGCTGGCGGGCAATCTGGCCACTTG GCCCGAGGGGCTAGAGGCGACCGGCTGGACCATCCTGCCCGCCACCGCGCTCACCGTCGTTCCCGTCACCGATACCCTGC CGCCGCCGCCAAGGCGCCCCGACCGCCCCGAGGACTCCGAGCGCCGCCAGCGTCACCGCGAGGCCTGGGACGATTGGCGC CCGCCCTTGCCCGACAGCCTGCCGCCCCCCCCGCCCCGCCTGTTCGCCGATCGCGGCGGCCGTGATCCCGCCGATCCCGA TGTCCGGCCGCGACCCTGGCGGCGGGGCGATGTGCGGGTGGCCGCCCTGACCCTGCCCAGCGGCATGCGCCTGTTGATTG GCCGCGATCTTGGGCCGATCCAGGCCCTGCGCCACCGCATGGCCGGGGCCATGCGCCTGGGGCTGGGCGGCATGGTGGTG CTGGGTCTGGCCGGCGGTCTGGTGATGAGCCGGCGCTTCAGCCGACGGCTGGAGGCGGTCAACCGCACCAGCCGCGAGAT CATCGGCGGCGATCTGTCGCGGCGGGTTCCGCAAGGCCGGGGCCTGGACGGCGACGACTTCGACCAATTGGCGGTCAATC TCAACGCCATGCTCGGGCGCATCGAAACCCTGATGGAGGGGGTGCGCCATGTCTCCGACACCATCGCCCATGATCTGCGT ACCCCGCTGTCGCGGCTGCGCAACCGGCTGGAGCGCCTGCAGGCCGATGCCCAATGCACCGACCGCGACGAATTGGCCGC CGCCCTGGCCGAGGTCGATAGCCTGCTCGCCACCTTCCACGCCCTGTTGCGCATCGCCCAGGTGGAAACAGGCGGCCGGC GCATGGCCTTTTCGCCCGTCGATCTGCTGGCCCTGCTCATCGATGTCGCCGAACTTTACGACGCGGTGGCCGACGAAAGA ACCGTAACCCTTGATCTCGACCTCGCCTTGGCGCCGGGCGCGCGTTTGCTGGTCGATGGCGACCGCGACCTGCTGTTCCA GGCCTTCGCCAATCTGCTCGACAACGCCGTCAAATACTCACCCGAGGGCGGCCGGGTCAGCCTCGCCCTGATCCGCGGCG AGACCCGGGTGACGATCAGCCTGCGCGATCAGGGACCAGGGATCCCCGCAGCCGACCGCCAGCGCGTTTTCGAACGCTTC GCCCGCCTTGATACCGCCCGCACCACCCCGGGCAACGGCCTGGGTCTGACCATGGTCGGCGCGGTGATCGAAGCCCATGA CGGCACCATCGCCCTGGAAGACGCGCCGGGCGGCGGATTGCTGGTCCGCGTCGTCTTGCCGCTGCGCCGGGGTCCGGGCT GA
Upstream 100 bases:
>100_bases GTTGACGTTCATATCAGCCGCCTGCGCCGCAAGATGGACGAGGGCTTCGCCCAGCCCTTCCTGGAAACCGTGCGGGGGGC GGGCTACGTCTTGCGCACCA
Downstream 100 bases:
>100_bases TCCGGACGGCCCCCTCCCCCTGGCGCGACCGGTCGCGCCGCTCCATAATGGGACGCCCCGCCGTTCGCCCGCTGTTGTAA GGAAGATCGATCATGACCCG
Product: periplasmic sensor Signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 533; Mature: 532
Protein sequence:
>533_residues MALKLPRRLLPRSTTLRIALSFLVLFGGASGLLMAGVYWTTSRFLMFQVDGVIGDDIALLTNAARERGHRLLAAMLVTRA RQAGEAQAVYLLADQDGEPLAGNLATWPEGLEATGWTILPATALTVVPVTDTLPPPPRRPDRPEDSERRQRHREAWDDWR PPLPDSLPPPPPRLFADRGGRDPADPDVRPRPWRRGDVRVAALTLPSGMRLLIGRDLGPIQALRHRMAGAMRLGLGGMVV LGLAGGLVMSRRFSRRLEAVNRTSREIIGGDLSRRVPQGRGLDGDDFDQLAVNLNAMLGRIETLMEGVRHVSDTIAHDLR TPLSRLRNRLERLQADAQCTDRDELAAALAEVDSLLATFHALLRIAQVETGGRRMAFSPVDLLALLIDVAELYDAVADER TVTLDLDLALAPGARLLVDGDRDLLFQAFANLLDNAVKYSPEGGRVSLALIRGETRVTISLRDQGPGIPAADRQRVFERF ARLDTARTTPGNGLGLTMVGAVIEAHDGTIALEDAPGGGLLVRVVLPLRRGPG
Sequences:
>Translated_533_residues MALKLPRRLLPRSTTLRIALSFLVLFGGASGLLMAGVYWTTSRFLMFQVDGVIGDDIALLTNAARERGHRLLAAMLVTRA RQAGEAQAVYLLADQDGEPLAGNLATWPEGLEATGWTILPATALTVVPVTDTLPPPPRRPDRPEDSERRQRHREAWDDWR PPLPDSLPPPPPRLFADRGGRDPADPDVRPRPWRRGDVRVAALTLPSGMRLLIGRDLGPIQALRHRMAGAMRLGLGGMVV LGLAGGLVMSRRFSRRLEAVNRTSREIIGGDLSRRVPQGRGLDGDDFDQLAVNLNAMLGRIETLMEGVRHVSDTIAHDLR TPLSRLRNRLERLQADAQCTDRDELAAALAEVDSLLATFHALLRIAQVETGGRRMAFSPVDLLALLIDVAELYDAVADER TVTLDLDLALAPGARLLVDGDRDLLFQAFANLLDNAVKYSPEGGRVSLALIRGETRVTISLRDQGPGIPAADRQRVFERF ARLDTARTTPGNGLGLTMVGAVIEAHDGTIALEDAPGGGLLVRVVLPLRRGPG >Mature_532_residues ALKLPRRLLPRSTTLRIALSFLVLFGGASGLLMAGVYWTTSRFLMFQVDGVIGDDIALLTNAARERGHRLLAAMLVTRAR QAGEAQAVYLLADQDGEPLAGNLATWPEGLEATGWTILPATALTVVPVTDTLPPPPRRPDRPEDSERRQRHREAWDDWRP PLPDSLPPPPPRLFADRGGRDPADPDVRPRPWRRGDVRVAALTLPSGMRLLIGRDLGPIQALRHRMAGAMRLGLGGMVVL GLAGGLVMSRRFSRRLEAVNRTSREIIGGDLSRRVPQGRGLDGDDFDQLAVNLNAMLGRIETLMEGVRHVSDTIAHDLRT PLSRLRNRLERLQADAQCTDRDELAAALAEVDSLLATFHALLRIAQVETGGRRMAFSPVDLLALLIDVAELYDAVADERT VTLDLDLALAPGARLLVDGDRDLLFQAFANLLDNAVKYSPEGGRVSLALIRGETRVTISLRDQGPGIPAADRQRVFERFA RLDTARTTPGNGLGLTMVGAVIEAHDGTIALEDAPGGGLLVRVVLPLRRGPG
Specific function: Member of the two-component regulatory system BaeS/BaeR. May activate BaeR by phosphorylation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1788393, Length=269, Percent_Identity=31.2267657992565, Blast_Score=125, Evalue=6e-30, Organism=Escherichia coli, GI1787894, Length=271, Percent_Identity=32.1033210332103, Blast_Score=100, Evalue=4e-22, Organism=Escherichia coli, GI1786783, Length=275, Percent_Identity=29.0909090909091, Blast_Score=96, Evalue=6e-21, Organism=Escherichia coli, GI1788713, Length=222, Percent_Identity=25.2252252252252, Blast_Score=93, Evalue=4e-20, Organism=Escherichia coli, GI1790346, Length=255, Percent_Identity=29.0196078431373, Blast_Score=92, Evalue=9e-20, Organism=Escherichia coli, GI1786600, Length=231, Percent_Identity=29.004329004329, Blast_Score=92, Evalue=1e-19, Organism=Escherichia coli, GI1789808, Length=246, Percent_Identity=29.2682926829268, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI1790861, Length=252, Percent_Identity=30.1587301587302, Blast_Score=91, Evalue=3e-19, Organism=Escherichia coli, GI1786912, Length=256, Percent_Identity=28.125, Blast_Score=90, Evalue=3e-19, Organism=Escherichia coli, GI1788279, Length=242, Percent_Identity=25.2066115702479, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI1790551, Length=225, Percent_Identity=29.7777777777778, Blast_Score=80, Evalue=4e-16, Organism=Escherichia coli, GI145693157, Length=221, Percent_Identity=30.316742081448, Blast_Score=79, Evalue=6e-16, Organism=Escherichia coli, GI1788549, Length=219, Percent_Identity=27.3972602739726, Blast_Score=79, Evalue=6e-16, Organism=Escherichia coli, GI1787374, Length=241, Percent_Identity=25.7261410788382, Blast_Score=75, Evalue=9e-15, Organism=Escherichia coli, GI1789149, Length=215, Percent_Identity=28.8372093023256, Blast_Score=73, Evalue=5e-14, Organism=Escherichia coli, GI1790436, Length=222, Percent_Identity=27.027027027027, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1789403, Length=245, Percent_Identity=29.7959183673469, Blast_Score=64, Evalue=3e-11, Organism=Escherichia coli, GI87082128, Length=227, Percent_Identity=28.6343612334802, Blast_Score=62, Evalue=1e-10,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 57986; Mature: 57855
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALKLPRRLLPRSTTLRIALSFLVLFGGASGLLMAGVYWTTSRFLMFQVDGVIGDDIALL CCCCCCHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEEEEEEECCCCCCHHHHH TNAARERGHRLLAAMLVTRARQAGEAQAVYLLADQDGEPLAGNLATWPEGLEATGWTILP HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEC ATALTVVPVTDTLPPPPRRPDRPEDSERRQRHREAWDDWRPPLPDSLPPPPPRLFADRGG CCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCC RDPADPDVRPRPWRRGDVRVAALTLPSGMRLLIGRDLGPIQALRHRMAGAMRLGLGGMVV CCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCHHHH LGLAGGLVMSRRFSRRLEAVNRTSREIIGGDLSRRVPQGRGLDGDDFDQLAVNLNAMLGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHH IETLMEGVRHVSDTIAHDLRTPLSRLRNRLERLQADAQCTDRDELAAALAEVDSLLATFH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH ALLRIAQVETGGRRMAFSPVDLLALLIDVAELYDAVADERTVTLDLDLALAPGARLLVDG HHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCEEEEEC DRDLLFQAFANLLDNAVKYSPEGGRVSLALIRGETRVTISLRDQGPGIPAADRQRVFERF CHHHHHHHHHHHHHHHHEECCCCCEEEEEEEECCEEEEEEEECCCCCCCCHHHHHHHHHH ARLDTARTTPGNGLGLTMVGAVIEAHDGTIALEDAPGGGLLVRVVLPLRRGPG HHHHCCCCCCCCCCHHHHHHHHHEECCCEEEEECCCCCCEEEEEEHHHCCCCC >Mature Secondary Structure ALKLPRRLLPRSTTLRIALSFLVLFGGASGLLMAGVYWTTSRFLMFQVDGVIGDDIALL CCCCCHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEEEEEEECCCCCCHHHHH TNAARERGHRLLAAMLVTRARQAGEAQAVYLLADQDGEPLAGNLATWPEGLEATGWTILP HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEC ATALTVVPVTDTLPPPPRRPDRPEDSERRQRHREAWDDWRPPLPDSLPPPPPRLFADRGG CCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCC RDPADPDVRPRPWRRGDVRVAALTLPSGMRLLIGRDLGPIQALRHRMAGAMRLGLGGMVV CCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCHHHH LGLAGGLVMSRRFSRRLEAVNRTSREIIGGDLSRRVPQGRGLDGDDFDQLAVNLNAMLGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHH IETLMEGVRHVSDTIAHDLRTPLSRLRNRLERLQADAQCTDRDELAAALAEVDSLLATFH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH ALLRIAQVETGGRRMAFSPVDLLALLIDVAELYDAVADERTVTLDLDLALAPGARLLVDG HHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCEEEEEC DRDLLFQAFANLLDNAVKYSPEGGRVSLALIRGETRVTISLRDQGPGIPAADRQRVFERF CHHHHHHHHHHHHHHHHEECCCCCEEEEEEEECCEEEEEEEECCCCCCCCHHHHHHHHHH ARLDTARTTPGNGLGLTMVGAVIEAHDGTIALEDAPGGGLLVRVVLPLRRGPG HHHHCCCCCCCCCCHHHHHHHHHEECCCEEEEECCCCCCEEEEEEHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8282725; 9097040; 9278503 [H]