| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594233
Identifier: 83594233
GI number: 83594233
Start: 3344052
End: 3344492
Strand: Direct
Name: 83594233
Synonym: Rru_A2901
Alternate gene names: NA
Gene position: 3344052-3344492 (Clockwise)
Preceding gene: 83594231
Following gene: 83594234
Centisome position: 76.82
GC content: 66.21
Gene sequence:
>441_bases ATGATCGATTTGGACCCGCGCTTGGCCGCGGACACCCACCCGGTGACCCAATGGCCGCTGTCCCAGGTGCGTCTGATGGA CGACGTGCGCTTTCCCTGGCTGGTGCTGATCCCCGATCGCCCCGGACTGGTCGAGATCTTCGATTTGCCGGCCGAGGACC AGGACAAGATGTGGCGCGAGGTCGCCCATGCCGCCGCCACCTTGAAGACCCTGAGCGGCGCCCATAAGATCAACATCGGC GCCCTGGGCAATCAGGTGTCCCAACTTCACATCCACATCATCGCCCGCCGCCCCGACGACGGCGCTTGGCCCGGGCCGGT CTGGGGCGTGGGCGAACGGCAACGCTACGATCAGGCCGAACTGGCCGAGTTCCTCTCCGGCCTGCGTGCCCAATTGATCG CGCCGGGCCAAGGGATCGTCGAAGAAGGCCAGACCCGATGA
Upstream 100 bases:
>100_bases CCGGCGCTGGCAACGCCCGGCCATCGCGCCCGTTGGTTCGCATCATTTCCTCCCCCGGCGGTCCGCGCGGCCTTCGGAGG GTTCACGAAGGATCTTCGCC
Downstream 100 bases:
>100_bases TCGGTCGCCTGCGCCGCGCCGTCCTCGGCGGGCTGGCCGGCCTGATCGGCCTGGGGATGATCGCCCAGGCCAGCGCCGCC CCCTCGCCTCCCGGCCTCAA
Product: histidine triad (HIT) protein
Products: NA
Alternate protein names: Histidine Triad Family Protein; HIT Family Hydrolase; Histidine Triad Domain Protein; Diadenosine Tetraphosphate Hydrolase; Histidine Triad; HIT Hydrolase; Pectate Lyase/Amb Allergen; Diadenosine Tetraphosphate; HIT Domain-Containing Protein; HIT1 Protein; HIT Family Protein; Diadenosine Tetraphosphate Hydrolase-Like Protein
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MIDLDPRLAADTHPVTQWPLSQVRLMDDVRFPWLVLIPDRPGLVEIFDLPAEDQDKMWREVAHAAATLKTLSGAHKINIG ALGNQVSQLHIHIIARRPDDGAWPGPVWGVGERQRYDQAELAEFLSGLRAQLIAPGQGIVEEGQTR
Sequences:
>Translated_146_residues MIDLDPRLAADTHPVTQWPLSQVRLMDDVRFPWLVLIPDRPGLVEIFDLPAEDQDKMWREVAHAAATLKTLSGAHKINIG ALGNQVSQLHIHIIARRPDDGAWPGPVWGVGERQRYDQAELAEFLSGLRAQLIAPGQGIVEEGQTR >Mature_146_residues MIDLDPRLAADTHPVTQWPLSQVRLMDDVRFPWLVLIPDRPGLVEIFDLPAEDQDKMWREVAHAAATLKTLSGAHKINIG ALGNQVSQLHIHIIARRPDDGAWPGPVWGVGERQRYDQAELAEFLSGLRAQLIAPGQGIVEEGQTR
Specific function: Unknown
COG id: COG0537
COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16266; Mature: 16266
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: PS51084 HIT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDLDPRLAADTHPVTQWPLSQVRLMDDVRFPWLVLIPDRPGLVEIFDLPAEDQDKMWRE CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCEEEEEECCCCCHHHHHHH VAHAAATLKTLSGAHKINIGALGNQVSQLHIHIIARRPDDGAWPGPVWGVGERQRYDQAE HHHHHHHHHHHCCCCEEEECCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHH LAEFLSGLRAQLIAPGQGIVEEGQTR HHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MIDLDPRLAADTHPVTQWPLSQVRLMDDVRFPWLVLIPDRPGLVEIFDLPAEDQDKMWRE CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCEEEEEECCCCCHHHHHHH VAHAAATLKTLSGAHKINIGALGNQVSQLHIHIIARRPDDGAWPGPVWGVGERQRYDQAE HHHHHHHHHHHCCCCEEEECCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHH LAEFLSGLRAQLIAPGQGIVEEGQTR HHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA