| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594220
Identifier: 83594220
GI number: 83594220
Start: 3332775
End: 3333467
Strand: Direct
Name: 83594220
Synonym: Rru_A2888
Alternate gene names: NA
Gene position: 3332775-3333467 (Clockwise)
Preceding gene: 83594219
Following gene: 83594221
Centisome position: 76.57
GC content: 56.71
Gene sequence:
>693_bases ATGGCGCGTTTGGCGGAGTACATGGCGGGGCTGGCCGCCCTTCTTGGCAACGAGAAGAGTGTGCATTTCCTTCGTCTTGA CCCGGGCAGCATCGAAATAGTTCATCGCGTCGATTTAGAAGATCGGCCCAAAGTAGAAGATCGCTTGGCGTCTCTTCGCC TTGGGAACGCCCCCGCCGATGCGGTCAAAGCGCACCATCTTATTGACAATATGCTTGCCAACGATAATGCCACCGGTGTT CTGACCTCGGGTCAGGATCTTGTGGTTATCGCGTTTACCGGGGGAAAGCGGCCAAAATCCCTGGATTACGGAACGTTTTC CCAGCCCGGGAGCTTTGACGGCATCCCGATCAAAGTCGGCGGCCTTGGCGAATTGGTCCCTATCCATCTCCAGGAAATTG GCCCGGCGCTGTTCGTCCATAACTGCGTTGCCACCCGAGCGATTGCCCGCGATGTCGCGAAGTATTTGTTCCAGAGCCCG ATCCGAGCCCATGGCGAAGGACGGTGGAAGCGCGAAGCGAATGACGGGTGGACGCTAAAGCGATTCGTTATCACTTCTTT TGAGCCTTTAGATGACGCGCCCCTTGAGTCGGTGGTGGCGCGCTTACGCGACATTGACGGGAACGGTTGGCGGGATGTCA CTCGTCCCTTAAAGGTCTTACGTGACATCCGTGGTGAGGAGATCACGCCTTAA
Upstream 100 bases:
>100_bases GTGGACGCGGGGTCTTCTCCCATATAGTCAGCAGGCGTAGGAGGCTGCCGTGGATGACCTGAGGTTCAAGATAGACGCCT TCCGACCGGACACGATCCCG
Downstream 100 bases:
>100_bases TGGTGATCTTCGACGCCAATTTTCTGCTGCTTCTCCTTGATCCCGATGTGGACGTTCCAAAAGACCCGGCGACAGGGCGG CCGCTGACCCGCGCCAAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MARLAEYMAGLAALLGNEKSVHFLRLDPGSIEIVHRVDLEDRPKVEDRLASLRLGNAPADAVKAHHLIDNMLANDNATGV LTSGQDLVVIAFTGGKRPKSLDYGTFSQPGSFDGIPIKVGGLGELVPIHLQEIGPALFVHNCVATRAIARDVAKYLFQSP IRAHGEGRWKREANDGWTLKRFVITSFEPLDDAPLESVVARLRDIDGNGWRDVTRPLKVLRDIRGEEITP
Sequences:
>Translated_230_residues MARLAEYMAGLAALLGNEKSVHFLRLDPGSIEIVHRVDLEDRPKVEDRLASLRLGNAPADAVKAHHLIDNMLANDNATGV LTSGQDLVVIAFTGGKRPKSLDYGTFSQPGSFDGIPIKVGGLGELVPIHLQEIGPALFVHNCVATRAIARDVAKYLFQSP IRAHGEGRWKREANDGWTLKRFVITSFEPLDDAPLESVVARLRDIDGNGWRDVTRPLKVLRDIRGEEITP >Mature_229_residues ARLAEYMAGLAALLGNEKSVHFLRLDPGSIEIVHRVDLEDRPKVEDRLASLRLGNAPADAVKAHHLIDNMLANDNATGVL TSGQDLVVIAFTGGKRPKSLDYGTFSQPGSFDGIPIKVGGLGELVPIHLQEIGPALFVHNCVATRAIARDVAKYLFQSPI RAHGEGRWKREANDGWTLKRFVITSFEPLDDAPLESVVARLRDIDGNGWRDVTRPLKVLRDIRGEEITP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25241; Mature: 25110
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARLAEYMAGLAALLGNEKSVHFLRLDPGSIEIVHRVDLEDRPKVEDRLASLRLGNAPAD CCHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCHH AVKAHHLIDNMLANDNATGVLTSGQDLVVIAFTGGKRPKSLDYGTFSQPGSFDGIPIKVG HHHHHHHHHHHHCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEC GLGELVPIHLQEIGPALFVHNCVATRAIARDVAKYLFQSPIRAHGEGRWKREANDGWTLK CCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCEEE RFVITSFEPLDDAPLESVVARLRDIDGNGWRDVTRPLKVLRDIRGEEITP EEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure ARLAEYMAGLAALLGNEKSVHFLRLDPGSIEIVHRVDLEDRPKVEDRLASLRLGNAPAD CHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCHH AVKAHHLIDNMLANDNATGVLTSGQDLVVIAFTGGKRPKSLDYGTFSQPGSFDGIPIKVG HHHHHHHHHHHHCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEC GLGELVPIHLQEIGPALFVHNCVATRAIARDVAKYLFQSPIRAHGEGRWKREANDGWTLK CCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCEEE RFVITSFEPLDDAPLESVVARLRDIDGNGWRDVTRPLKVLRDIRGEEITP EEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA