| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is hipO [H]
Identifier: 83594203
GI number: 83594203
Start: 3307070
End: 3308245
Strand: Reverse
Name: hipO [H]
Synonym: Rru_A2871
Alternate gene names: 83594203
Gene position: 3308245-3307070 (Counterclockwise)
Preceding gene: 83594204
Following gene: 83594198
Centisome position: 76.0
GC content: 68.45
Gene sequence:
>1176_bases ATGACCCCCGCCATCCCGCCCGCCATCGCGGCGCTGACCGGTGATATGAAAGCGTGGCGTCATCATCTGCACGCCCATCC CGAAACCGCCTTCGAAGAGCACGCCACCGCCGATTTCATCGCCGGGCTGCTCGACGACTTCGGGGTCGAGGTCCATCGCG GGCTGGCCGGAACCGGGGTGGTCGGGGTGATCGCCGGCAAACGGACGGGAAACCGCGCGATCGGGTTGCGCGCCGATATC GACGCCCTGCACGTCACCGAGGCCACCGGCCTGCCCCACGCCTCGGTCCATGCCGGGCGCATGCACGCCTGCGGCCATGA CGGCCACACGGCGATGCTGCTGGGAGCGGCCAAGCATCTGGCCGCGACCCGCGATTTCGCCGGCAGGCTGATCCTCATCT TCCAGCCCGCCGAGGAAAACGAGGGCGGCGGCAAGGTGATGGTCGAAGAGGGCTTGTTCGACCGGTTCCCCGTGGATGCG GTCTATGGCATGCACAACTGGCCGGGGCTGGAGGAAGGCCACTTCGCCCTGCGCACCGGTCCGATCATGGCCGGCTATGA CGTGTTCGAGATCACGCTTACCGGCAAGGGGGGCCATGCCGCCATGCCCCATCTCGGCACCGATCAGTTGGTGGCGGCCG GGCATCTGATGACCGCCTTGCAGTCGATCGTCGCCCGCTCGGTCAATCCGACCGAGGCGGCGGTGGTGTCGGTCACCCAG ATGCACGGCGGCGACACCTGGAACGTCCTGCCCGCCAGCGTCGTGCTGCGTGGCACCGTGCGCACCTTCACCAAAGCCGT GCAGGATCTGATCGAGACGCGGATCACCGAGCTGTCGCGATCGATCGCCCAGGGCTTTGGCGCCGAGGCGGCGATCCATT ACGAGCGGCGCTATCCCGCCACCGTCAACAGCCCCGAGGAAGCCGCCGTCGCCGCCCGCGTGGCCAGCGCCGTGGTCGGC GCCGACAAGGTGGACACCAATTGCCCGCAGACCATGGGGGCGGAGGATTTCGCCTTCATGCTGGGGGTCAAGCCGGGCGC CTATGTGCAGCTTGGCGCCGGCCCGGGGCGGGGCGGTTGCATGCTCCACAACCCCGGTTACGACTTCAACGACGCCCTTC TGGGCGTAGGGGCGAGCTATTGGGTGGGGCTGGTCCACGACCAACTGGCCGGCTAG
Upstream 100 bases:
>100_bases ATCCCGATGCCACGATGGAACGGACCCAGACCATCATGAAGGGCGGACGCTGCTGCGATTTCCGCTATCACCTGAAGACG ACCGATACGGAGAACGCGCA
Downstream 100 bases:
>100_bases GCTTCTCGCGAGCCTCGGCGGCGAGGGGGTTAGGCCCCCTCGCCGTCGGTGTTCTCGAAGTGGAGACGCACCTTGTCGAT GCTGCGGCCCTGCATCGAGA
Product: peptidase M20D, amidohydrolase
Products: NA
Alternate protein names: Benzoylglycine amidohydrolase; Hippuricase [H]
Number of amino acids: Translated: 391; Mature: 390
Protein sequence:
>391_residues MTPAIPPAIAALTGDMKAWRHHLHAHPETAFEEHATADFIAGLLDDFGVEVHRGLAGTGVVGVIAGKRTGNRAIGLRADI DALHVTEATGLPHASVHAGRMHACGHDGHTAMLLGAAKHLAATRDFAGRLILIFQPAEENEGGGKVMVEEGLFDRFPVDA VYGMHNWPGLEEGHFALRTGPIMAGYDVFEITLTGKGGHAAMPHLGTDQLVAAGHLMTALQSIVARSVNPTEAAVVSVTQ MHGGDTWNVLPASVVLRGTVRTFTKAVQDLIETRITELSRSIAQGFGAEAAIHYERRYPATVNSPEEAAVAARVASAVVG ADKVDTNCPQTMGAEDFAFMLGVKPGAYVQLGAGPGRGGCMLHNPGYDFNDALLGVGASYWVGLVHDQLAG
Sequences:
>Translated_391_residues MTPAIPPAIAALTGDMKAWRHHLHAHPETAFEEHATADFIAGLLDDFGVEVHRGLAGTGVVGVIAGKRTGNRAIGLRADI DALHVTEATGLPHASVHAGRMHACGHDGHTAMLLGAAKHLAATRDFAGRLILIFQPAEENEGGGKVMVEEGLFDRFPVDA VYGMHNWPGLEEGHFALRTGPIMAGYDVFEITLTGKGGHAAMPHLGTDQLVAAGHLMTALQSIVARSVNPTEAAVVSVTQ MHGGDTWNVLPASVVLRGTVRTFTKAVQDLIETRITELSRSIAQGFGAEAAIHYERRYPATVNSPEEAAVAARVASAVVG ADKVDTNCPQTMGAEDFAFMLGVKPGAYVQLGAGPGRGGCMLHNPGYDFNDALLGVGASYWVGLVHDQLAG >Mature_390_residues TPAIPPAIAALTGDMKAWRHHLHAHPETAFEEHATADFIAGLLDDFGVEVHRGLAGTGVVGVIAGKRTGNRAIGLRADID ALHVTEATGLPHASVHAGRMHACGHDGHTAMLLGAAKHLAATRDFAGRLILIFQPAEENEGGGKVMVEEGLFDRFPVDAV YGMHNWPGLEEGHFALRTGPIMAGYDVFEITLTGKGGHAAMPHLGTDQLVAAGHLMTALQSIVARSVNPTEAAVVSVTQM HGGDTWNVLPASVVLRGTVRTFTKAVQDLIETRITELSRSIAQGFGAEAAIHYERRYPATVNSPEEAAVAARVASAVVGA DKVDTNCPQTMGAEDFAFMLGVKPGAYVQLGAGPGRGGCMLHNPGYDFNDALLGVGASYWVGLVHDQLAG
Specific function: Required But Not Essential For Aminobenzoyl-Glutamate Utilization. May Participate In Hydrolysis Of Aminobenzoyl- Glutamate To Aminobenzoate, Either Alone Or In Combination With Abgb. [C]
COG id: COG1473
COG function: function code R; Metal-dependent amidase/aminoacylase/carboxypeptidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M20 family [H]
Homologues:
Organism=Escherichia coli, GI87081880, Length=424, Percent_Identity=28.0660377358491, Blast_Score=89, Evalue=7e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017439 - InterPro: IPR010168 - InterPro: IPR002933 - InterPro: IPR011650 [H]
Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]
EC number: =3.5.1.32 [H]
Molecular weight: Translated: 41039; Mature: 40908
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPAIPPAIAALTGDMKAWRHHLHAHPETAFEEHATADFIAGLLDDFGVEVHRGLAGTGV CCCCCCHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCE VGVIAGKRTGNRAIGLRADIDALHVTEATGLPHASVHAGRMHACGHDGHTAMLLGAAKHL EEEEECCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCEEECCCCCCEEEEHHHHHHH AATRDFAGRLILIFQPAEENEGGGKVMVEEGLFDRFPVDAVYGMHNWPGLEEGHFALRTG HHHHHCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCHHHCCCCCCCCCCCCCEEEEEC PIMAGYDVFEITLTGKGGHAAMPHLGTDQLVAAGHLMTALQSIVARSVNPTEAAVVSVTQ CEEECCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHEEEEEE MHGGDTWNVLPASVVLRGTVRTFTKAVQDLIETRITELSRSIAQGFGAEAAIHYERRYPA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC TVNSPEEAAVAARVASAVVGADKVDTNCPQTMGAEDFAFMLGVKPGAYVQLGAGPGRGGC CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCE MLHNPGYDFNDALLGVGASYWVGLVHDQLAG EECCCCCCCCHHHHHCCHHHHHHHHHHHHCC >Mature Secondary Structure TPAIPPAIAALTGDMKAWRHHLHAHPETAFEEHATADFIAGLLDDFGVEVHRGLAGTGV CCCCCHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCE VGVIAGKRTGNRAIGLRADIDALHVTEATGLPHASVHAGRMHACGHDGHTAMLLGAAKHL EEEEECCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCEEECCCCCCEEEEHHHHHHH AATRDFAGRLILIFQPAEENEGGGKVMVEEGLFDRFPVDAVYGMHNWPGLEEGHFALRTG HHHHHCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCHHHCCCCCCCCCCCCCEEEEEC PIMAGYDVFEITLTGKGGHAAMPHLGTDQLVAAGHLMTALQSIVARSVNPTEAAVVSVTQ CEEECCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHEEEEEE MHGGDTWNVLPASVVLRGTVRTFTKAVQDLIETRITELSRSIAQGFGAEAAIHYERRYPA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC TVNSPEEAAVAARVASAVVGADKVDTNCPQTMGAEDFAFMLGVKPGAYVQLGAGPGRGGC CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCE MLHNPGYDFNDALLGVGASYWVGLVHDQLAG EECCCCCCCCHHHHHCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7730270; 10688204 [H]