Click here to switch to the map view.

The map label for this gene is yqhT [H]

Identifier: 83594197

GI number: 83594197

Start: 3298299

End: 3300332

Strand: Reverse

Name: yqhT [H]

Synonym: Rru_A2865

Alternate gene names: 83594197

Gene position: 3300332-3298299 (Counterclockwise)

Preceding gene: 83594198

Following gene: 83594195

Centisome position: 75.82

GC content: 68.39

Gene sequence:

>2034_bases
ATGAATGACAGTTTCGACGGGCTCGATATCGATTCGATCACCCGCGATCTCGAAGGAATCGGCGGCGCCCTGTCGCCTGG
GGATCTCGCCACCCTGGTCGCCGGCGCGGCGGCCGCTCCGGCGGCGGGCGGCGAGGGCTGGCTTGATCTGATCGGCGCCC
CGGTCAATGCCCCCTTGCGCGGGGCGCTGGTCGATCTGCGCGCCCGCGCCGCCAAGGCCTTCGCCCATTCGCGCGTTCCG
CTGCCCGAGCGCCTTGTCGCCGTGCGTCGGCGCATGGCCGAAGAAAACCTTGACGGGCTGATCGTTCCCCATGCCGACGA
ATACCAGAACGAGTTCATTCCCCTGCGCGCCGAACGATTGGCGTGGCTGACCGGCTTTTCCGGGTCGGCCGGAACAGCGG
TGGTGCTGGCCGAGCGGGCGGCGATCTTCGTTGACGGGCGCTATACCCTGCAGGTGCGCGGCGAGGTCGATGCCGGAGCC
TTTTCTTTTCATCACCTGATCGACGAGCCGCCGGCGCGCTGGCTGGAAACGGCGCTGCCGACGGGGGCTCGTCTGGGCTA
TGACCCCTGGCTGCATTCCCCGGCCGAACGCGACCGGCTGCGCGAGGCCTGCAAGCGGGCCGGCGCCCATCTGGTGGCGC
TGGAGACCAACCTGCTCGATGCGGCGTGGAGCGATCAGCCGCCGACTCCGCTGTCGCCGGTGGTTCCCCATCCCGAAGGC
TATTCGGGGCGCGGCGGGGCGGAAAAGCGCGAGGACATCGCCGAGGCGCTGACCAAGGACGGGCAAGACGCGGTGGTGCT
GTCGGCCCCCGACAGCATCGCCTGGCTTTTCAATATTCGCGGCGGCGATGTGGCCTTCACCCCCTTGCCGCTGTCTTATG
CCCTGCTTCACGGCGATGGATCGGCCGAGATTTTCGTCGATCCCCTGAAAGTCAGCGCCGGTCTCGCGGCCCATCTGGGC
AATCGCGTGCGGCTTTCGCCGCCCAGCGCCCTGGCCCCGGCCTTGAGCGCGCTCGGCCGGCGCCATGCCAAGGTGCGGGT
GGACTGGACGGCCACCCCCTCTTGGATCGTTGATCGTCTGGAGGAGGCCGGCGCGGCCATCGTCCGCGCCGCCGACCCCT
GCGTGTTGCCCAAGGCGATCAAGAACGCCGTGGAATTGGAAGGTAGCCGCGCCGCCCATCGCCGCGATGGTCTGGCGATG
GTGCGTTTCCTGCACTGGCTGTCCCAGGAAGCGCCCAAGGGGACTTTGAGCGAGCTGGCGGTGGCCGAGAAGCTGGGGCG
CTTGCGCGCCGTCGATCCGCTGCTGCGCGGTCTGTCCTTCGGCACGATCTCGGCCGCCGGTCCCAACGCCGCCTTCTGCC
ACTACCATGCCTCGCCCGAAAGCGACCGGAGGCTGGTTCCCGGCAGCCTTTATCTGGTCGATAGCGGCGGGCAGTATCTT
GATGGCACCACCGATATCACCCGCACCGTGGCCATCGGCACCCCCACCCCGGCGATGCGGCGGTGTTTCACCCTGGTGCT
CAAGGGGCATCTGGCGCTCGGCCGCGCCCGCTTCCCCCAGGGAACGACCGGCCACCAGCTCGATGCCCTCGCCCGTCAGC
CGCTGTGGGCCGAAGGGATGGATTACGACCATGGCACCGGTCACGGAGTGGGCAGTTTCCTCGGGGTTCACGAAGGCCCG
GCGCGCATCAGCAAGGCCGCCAATGCCGTGCCGCTGGTTCCGGGGATGATCCTGTCCAACGAGCCCGGCTATTACCGCGA
GGGCGAGTTCGGCATCCGCATCGAAACCCTGGTCGCCGTGCGCCCGGTCGATCCCGCGCCCGAGGCCGCCGACCGGGTCT
TCCTGGAATTTGAAACCTTGACGGTGGTGCCGCTTGATCGGACGCTGATCGATGCCGCTTTGCTTGATATCTATGAGCGG
GCCTGGGTCGACGCCTATCACGCCCGCGTCCGCGAGACCCATGCGCCGCTGCTTGATACCCCAGACGATCGGCCGGTTCT
GGACTGGCTGATCGCGGCGACGGCGCCGCTCTAA

Upstream 100 bases:

>100_bases
CCGGGGTCGGCTTGCGGCGGCCGGTCCGTCGCGCCATGTCGAAGGCGGGCTTGCCAAGGACCCGGTGGGATAAGGCCCGG
TGGGATAAGGAATAGGCTTG

Downstream 100 bases:

>100_bases
GCGCTTTGCCAAGGCAGGCGGGCCCCGGGGAGACCGGAGCCCGCCGTCTTTGGATCAGGCGAAGATGCCGGCGCTGCCGG
TCACCGCGCCATTCGACGTA

Product: peptidase M24

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 677; Mature: 677

Protein sequence:

>677_residues
MNDSFDGLDIDSITRDLEGIGGALSPGDLATLVAGAAAAPAAGGEGWLDLIGAPVNAPLRGALVDLRARAAKAFAHSRVP
LPERLVAVRRRMAEENLDGLIVPHADEYQNEFIPLRAERLAWLTGFSGSAGTAVVLAERAAIFVDGRYTLQVRGEVDAGA
FSFHHLIDEPPARWLETALPTGARLGYDPWLHSPAERDRLREACKRAGAHLVALETNLLDAAWSDQPPTPLSPVVPHPEG
YSGRGGAEKREDIAEALTKDGQDAVVLSAPDSIAWLFNIRGGDVAFTPLPLSYALLHGDGSAEIFVDPLKVSAGLAAHLG
NRVRLSPPSALAPALSALGRRHAKVRVDWTATPSWIVDRLEEAGAAIVRAADPCVLPKAIKNAVELEGSRAAHRRDGLAM
VRFLHWLSQEAPKGTLSELAVAEKLGRLRAVDPLLRGLSFGTISAAGPNAAFCHYHASPESDRRLVPGSLYLVDSGGQYL
DGTTDITRTVAIGTPTPAMRRCFTLVLKGHLALGRARFPQGTTGHQLDALARQPLWAEGMDYDHGTGHGVGSFLGVHEGP
ARISKAANAVPLVPGMILSNEPGYYREGEFGIRIETLVAVRPVDPAPEAADRVFLEFETLTVVPLDRTLIDAALLDIYER
AWVDAYHARVRETHAPLLDTPDDRPVLDWLIAATAPL

Sequences:

>Translated_677_residues
MNDSFDGLDIDSITRDLEGIGGALSPGDLATLVAGAAAAPAAGGEGWLDLIGAPVNAPLRGALVDLRARAAKAFAHSRVP
LPERLVAVRRRMAEENLDGLIVPHADEYQNEFIPLRAERLAWLTGFSGSAGTAVVLAERAAIFVDGRYTLQVRGEVDAGA
FSFHHLIDEPPARWLETALPTGARLGYDPWLHSPAERDRLREACKRAGAHLVALETNLLDAAWSDQPPTPLSPVVPHPEG
YSGRGGAEKREDIAEALTKDGQDAVVLSAPDSIAWLFNIRGGDVAFTPLPLSYALLHGDGSAEIFVDPLKVSAGLAAHLG
NRVRLSPPSALAPALSALGRRHAKVRVDWTATPSWIVDRLEEAGAAIVRAADPCVLPKAIKNAVELEGSRAAHRRDGLAM
VRFLHWLSQEAPKGTLSELAVAEKLGRLRAVDPLLRGLSFGTISAAGPNAAFCHYHASPESDRRLVPGSLYLVDSGGQYL
DGTTDITRTVAIGTPTPAMRRCFTLVLKGHLALGRARFPQGTTGHQLDALARQPLWAEGMDYDHGTGHGVGSFLGVHEGP
ARISKAANAVPLVPGMILSNEPGYYREGEFGIRIETLVAVRPVDPAPEAADRVFLEFETLTVVPLDRTLIDAALLDIYER
AWVDAYHARVRETHAPLLDTPDDRPVLDWLIAATAPL
>Mature_677_residues
MNDSFDGLDIDSITRDLEGIGGALSPGDLATLVAGAAAAPAAGGEGWLDLIGAPVNAPLRGALVDLRARAAKAFAHSRVP
LPERLVAVRRRMAEENLDGLIVPHADEYQNEFIPLRAERLAWLTGFSGSAGTAVVLAERAAIFVDGRYTLQVRGEVDAGA
FSFHHLIDEPPARWLETALPTGARLGYDPWLHSPAERDRLREACKRAGAHLVALETNLLDAAWSDQPPTPLSPVVPHPEG
YSGRGGAEKREDIAEALTKDGQDAVVLSAPDSIAWLFNIRGGDVAFTPLPLSYALLHGDGSAEIFVDPLKVSAGLAAHLG
NRVRLSPPSALAPALSALGRRHAKVRVDWTATPSWIVDRLEEAGAAIVRAADPCVLPKAIKNAVELEGSRAAHRRDGLAM
VRFLHWLSQEAPKGTLSELAVAEKLGRLRAVDPLLRGLSFGTISAAGPNAAFCHYHASPESDRRLVPGSLYLVDSGGQYL
DGTTDITRTVAIGTPTPAMRRCFTLVLKGHLALGRARFPQGTTGHQLDALARQPLWAEGMDYDHGTGHGVGSFLGVHEGP
ARISKAANAVPLVPGMILSNEPGYYREGEFGIRIETLVAVRPVDPAPEAADRVFLEFETLTVVPLDRTLIDAALLDIYER
AWVDAYHARVRETHAPLLDTPDDRPVLDWLIAATAPL

Specific function: Unknown

COG id: COG0006

COG function: function code E; Xaa-Pro aminopeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M24B family [H]

Homologues:

Organism=Homo sapiens, GI264681563, Length=603, Percent_Identity=38.4742951907131, Blast_Score=414, Evalue=1e-115,
Organism=Homo sapiens, GI93141226, Length=602, Percent_Identity=36.5448504983389, Blast_Score=398, Evalue=1e-111,
Organism=Homo sapiens, GI264681565, Length=603, Percent_Identity=36.6500829187396, Blast_Score=379, Evalue=1e-105,
Organism=Escherichia coli, GI1788728, Length=171, Percent_Identity=35.672514619883, Blast_Score=74, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17509539, Length=592, Percent_Identity=34.1216216216216, Blast_Score=309, Evalue=3e-84,
Organism=Caenorhabditis elegans, GI25149105, Length=643, Percent_Identity=28.6158631415241, Blast_Score=261, Evalue=1e-69,
Organism=Saccharomyces cerevisiae, GI6322999, Length=659, Percent_Identity=32.6251896813354, Blast_Score=332, Evalue=1e-91,
Organism=Drosophila melanogaster, GI17137632, Length=594, Percent_Identity=37.8787878787879, Blast_Score=366, Evalue=1e-101,
Organism=Drosophila melanogaster, GI161078230, Length=616, Percent_Identity=29.7077922077922, Blast_Score=268, Evalue=7e-72,
Organism=Drosophila melanogaster, GI21357287, Length=616, Percent_Identity=29.7077922077922, Blast_Score=268, Evalue=7e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000587
- InterPro:   IPR001714
- InterPro:   IPR000994
- InterPro:   IPR001131 [H]

Pfam domain/function: PF01321 Creatinase_N; PF00557 Peptidase_M24 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 72463; Mature: 72463

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDSFDGLDIDSITRDLEGIGGALSPGDLATLVAGAAAAPAAGGEGWLDLIGAPVNAPLR
CCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCHH
GALVDLRARAAKAFAHSRVPLPERLVAVRRRMAEENLDGLIVPHADEYQNEFIPLRAERL
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEECCCCHHHCCCCCCCCHHHE
AWLTGFSGSAGTAVVLAERAAIFVDGRYTLQVRGEVDAGAFSFHHLIDEPPARWLETALP
EEEECCCCCCCCEEEEEECEEEEECCEEEEEEECCCCCCHHHHHHHHCCCHHHHHHHHCC
TGARLGYDPWLHSPAERDRLREACKRAGAHLVALETNLLDAAWSDQPPTPLSPVVPHPEG
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHCCCCCCCCCCCCCCCCCCC
YSGRGGAEKREDIAEALTKDGQDAVVLSAPDSIAWLFNIRGGDVAFTPLPLSYALLHGDG
CCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEECCCCEEEECCCCEEEEEECCC
SAEIFVDPLKVSAGLAAHLGNRVRLSPPSALAPALSALGRRHAKVRVDWTATPSWIVDRL
CCEEEEECHHHHCCHHHHCCCEEEECCCHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHH
EEAGAAIVRAADPCVLPKAIKNAVELEGSRAAHRRDGLAMVRFLHWLSQEAPKGTLSELA
HHCCCEEEECCCCCCCHHHHHHHHHCCCCHHHHHHCHHHHHHHHHHHHCCCCCCHHHHHH
VAEKLGRLRAVDPLLRGLSFGTISAAGPNAAFCHYHASPESDRRLVPGSLYLVDSGGQYL
HHHHHHHHHHHHHHHHCCCCCEEECCCCCCEEEEEECCCCCCCEECCCEEEEEECCCCCC
DGTTDITRTVAIGTPTPAMRRCFTLVLKGHLALGRARFPQGTTGHQLDALARQPLWAEGM
CCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCC
DYDHGTGHGVGSFLGVHEGPARISKAANAVPLVPGMILSNEPGYYREGEFGIRIETLVAV
CCCCCCCCCCHHHHCCCCCHHHHHHHCCCCCCCCCEEECCCCCCEECCCCCEEEEEEEEE
RPVDPAPEAADRVFLEFETLTVVPLDRTLIDAALLDIYERAWVDAYHARVRETHAPLLDT
ECCCCCCCCCCEEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDDRPVLDWLIAATAPL
CCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MNDSFDGLDIDSITRDLEGIGGALSPGDLATLVAGAAAAPAAGGEGWLDLIGAPVNAPLR
CCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCHH
GALVDLRARAAKAFAHSRVPLPERLVAVRRRMAEENLDGLIVPHADEYQNEFIPLRAERL
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEECCCCHHHCCCCCCCCHHHE
AWLTGFSGSAGTAVVLAERAAIFVDGRYTLQVRGEVDAGAFSFHHLIDEPPARWLETALP
EEEECCCCCCCCEEEEEECEEEEECCEEEEEEECCCCCCHHHHHHHHCCCHHHHHHHHCC
TGARLGYDPWLHSPAERDRLREACKRAGAHLVALETNLLDAAWSDQPPTPLSPVVPHPEG
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHCCCCCCCCCCCCCCCCCCC
YSGRGGAEKREDIAEALTKDGQDAVVLSAPDSIAWLFNIRGGDVAFTPLPLSYALLHGDG
CCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEECCCCEEEECCCCEEEEEECCC
SAEIFVDPLKVSAGLAAHLGNRVRLSPPSALAPALSALGRRHAKVRVDWTATPSWIVDRL
CCEEEEECHHHHCCHHHHCCCEEEECCCHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHH
EEAGAAIVRAADPCVLPKAIKNAVELEGSRAAHRRDGLAMVRFLHWLSQEAPKGTLSELA
HHCCCEEEECCCCCCCHHHHHHHHHCCCCHHHHHHCHHHHHHHHHHHHCCCCCCHHHHHH
VAEKLGRLRAVDPLLRGLSFGTISAAGPNAAFCHYHASPESDRRLVPGSLYLVDSGGQYL
HHHHHHHHHHHHHHHHCCCCCEEECCCCCCEEEEEECCCCCCCEECCCEEEEEECCCCCC
DGTTDITRTVAIGTPTPAMRRCFTLVLKGHLALGRARFPQGTTGHQLDALARQPLWAEGM
CCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCC
DYDHGTGHGVGSFLGVHEGPARISKAANAVPLVPGMILSNEPGYYREGEFGIRIETLVAV
CCCCCCCCCCHHHHCCCCCHHHHHHHCCCCCCCCCEEECCCCCCEECCCCCEEEEEEEEE
RPVDPAPEAADRVFLEFETLTVVPLDRTLIDAALLDIYERAWVDAYHARVRETHAPLLDT
ECCCCCCCCCCEEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDDRPVLDWLIAATAPL
CCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]