Click here to switch to the map view.

The map label for this gene is flgK [H]

Identifier: 83594184

GI number: 83594184

Start: 3281526

End: 3283709

Strand: Direct

Name: flgK [H]

Synonym: Rru_A2852

Alternate gene names: 83594184

Gene position: 3281526-3283709 (Clockwise)

Preceding gene: 83594183

Following gene: 83594185

Centisome position: 75.39

GC content: 62.41

Gene sequence:

>2184_bases
ATGAGCCTGAATCTCGCCCTGTCCGCCGGAATCAGTGGACTTCAGACAGCCCAGAAAGGGCTCGATCTGGTTTCCCACAA
TCTGGCGAACATCAACACGCCGGGCTATACCCGGAAGATCTTCAACCCGGAAAGCGTCGTCCTCAACGGCAGCGGCGTCG
GTGTGCAGACCGGCACGATCGCCCGGCGCGTCGACGAGGGTCTCAACCGGGACCTGCGCGAAGAGCTGGCCAAATACACC
GAATACAAAACCAAGGCGTCCTACTACCAGCGCATGCAGGACCTGTTTGGCAAGCCGGCCTCGAACAACTCGATCAGCCA
TAACCTGACGGCCTTCGGTCAGCAGTTCGATACCCTGGCGCTCGAGACCGACAAATCGACCCAGCAGATGGCCACGGTGC
GCTCGGCCCAGGAACTGACCAGCCAGTTCAACACCATCTCCACCCGTTTGCAGCAGATGCGCCTGACCGCCGATCAGGAT
ATCGCCGGCGCGGTGGCCGAGGTTAACGGCCACCTCAAGAACATCGACACCCTGAACGACGAGATCACCCTGGGGGTGGC
CACCGGTCGCGACGTGACCGATCTTCAGGACAAGCGCGACCTTGAGGTTCAGCAACTGACCGAACTGGTCGATGTCACGA
CGTTTGAGCGCCCGGGCGGCGCCCTGGTGGTTTATACCAAGGGCGGATCAACCCTGCTCGACGCCGATCCGATCCCCGTC
AGTTTCACCGCGTCCAGTTCGGTCACCGCCTGGGACAGCAAGGGCGGCGGCGATTTTTCGGCGATCTCGGTCGGCGGCAG
CGATATCACCGGCGAAATCGGCGCCGGCAAGCTGGCCGCCCTGATCGACATGCGCGACAAGACCGTCCCCGCCTATCAAT
CGCAGATGGACGAACTGGCCGGCAAGTTCAGCGACTCGATCAACCAGATCCACAACCGCGGCACCAGCCAGCCGACCATC
GCCAATTCCTATTCCGGCACCACCACCTTCATCGCGCCGGCCACGCAAACCATGGCCCTGACCACCGGCGACGTGGCGAT
TACGCTGTTTAACGCCGATGGCACCCAGAAGGCGACGACGACGCTGAAAACGATCGTGCCGGCGGTGGCCACCGGAGAGG
ATATCTCGACCGTGACCACGGCGATCCAGACCTGGCTCAACTCGGGGACCGGCGGCGGCTTGACCGGGGCCACGGCCACG
GTCGACGCCAATGGCAAGGTCCAGATCAAACTCGGCACCAACACCGCCTCGCTGGCCTTCCGCGATCAGGCCTCGACCAC
CGCCGGATCGACGGCGGGCGATGTGACCATCGCCTATGACGCCGACGGCAATGGCACGACCGATCAGACCGTTTCGGGAT
TCGCCAATTTCCTTGGCCTCAACGACATGTTCGTCGCCAATCGCGGGCAGTGGATGGCCGACAGCGACGTCAAGGCCCAG
AACTGGACGCCCAATGTCGGCGGCGCCCTGACCTTCTATGATAGCAACAATCCCCCCGGCGGAACCGCCATCGGCACGCT
GACCATCGCCCCGAACGAAACCCTCAAAGACATCGCCCTCAAGATCAATTCCGATACGGCGCTTTCGGCCAAGCTCGAAG
CCGAGGTCGTGCAAGATGGCGACGGCTATCGCCTGCGCATCAAGGATCGCGCCGGCAAGGATATGGTCATCACCCAGACC
GCCGGCGTCGGCACCGGGCTGATCGAACAATTGGGCCTGAAGGATTCGAAGGCCGGGCTGTCGGGCCAGTTGCGCGTCAA
CCAAAGCCTGCTAGATGATTCGTCGCGCATCTCGCGCGGCGCCGTGCTCTTCAATTCCGACACCGGCCAGTACTATATCA
GTGCGGGCGACAACACGACGGCCAACCAATTGGCCAAATCCTTCCAAACGGCGGTCTCTTTCGACGCCGCCGGCGGGGTG
ACGACGGGGGCGCGCAGTTTCTCGGACTATGCGGCCCTGACGCTCAGCCAGAACGCCAGCGAAGCCAGTGCGGTGGCCAC
CACTGTCAGCTACCAAAGCCAACTCGCCGATACCTTGCAACTGAAGTCGGCCGAAATCAGCGCCGTCAATATGGACGAGG
AACTCTCTCAACTCCTGGTCTGGGAACAGATGTACCGGGCTTCGGCCAAAGTCATCTCGGCCGCCGCCGACATGCTCGAC
GTGCTCAACAGCATCATCCGTTAA

Upstream 100 bases:

>100_bases
GCGGTGTGCGGGGACAAGGTTTCCCGCACACCGCTCTAAACGACGACGGACTAGCCGCGACCGGACCTGACCGGCGCCGC
GCTCGGGAGGAACCCGGACG

Downstream 100 bases:

>100_bases
GCGAGGACCAGATCATGGCATCGACAATCGAACGGGTCGGCACCTATTCCCAGCGCAGCTCCCTGGTCGGCCAGATGCTG
GCCATCCAGAAGCGGCTGAC

Product: hypothetical protein

Products: NA

Alternate protein names: HAP1 [H]

Number of amino acids: Translated: 727; Mature: 726

Protein sequence:

>727_residues
MSLNLALSAGISGLQTAQKGLDLVSHNLANINTPGYTRKIFNPESVVLNGSGVGVQTGTIARRVDEGLNRDLREELAKYT
EYKTKASYYQRMQDLFGKPASNNSISHNLTAFGQQFDTLALETDKSTQQMATVRSAQELTSQFNTISTRLQQMRLTADQD
IAGAVAEVNGHLKNIDTLNDEITLGVATGRDVTDLQDKRDLEVQQLTELVDVTTFERPGGALVVYTKGGSTLLDADPIPV
SFTASSSVTAWDSKGGGDFSAISVGGSDITGEIGAGKLAALIDMRDKTVPAYQSQMDELAGKFSDSINQIHNRGTSQPTI
ANSYSGTTTFIAPATQTMALTTGDVAITLFNADGTQKATTTLKTIVPAVATGEDISTVTTAIQTWLNSGTGGGLTGATAT
VDANGKVQIKLGTNTASLAFRDQASTTAGSTAGDVTIAYDADGNGTTDQTVSGFANFLGLNDMFVANRGQWMADSDVKAQ
NWTPNVGGALTFYDSNNPPGGTAIGTLTIAPNETLKDIALKINSDTALSAKLEAEVVQDGDGYRLRIKDRAGKDMVITQT
AGVGTGLIEQLGLKDSKAGLSGQLRVNQSLLDDSSRISRGAVLFNSDTGQYYISAGDNTTANQLAKSFQTAVSFDAAGGV
TTGARSFSDYAALTLSQNASEASAVATTVSYQSQLADTLQLKSAEISAVNMDEELSQLLVWEQMYRASAKVISAAADMLD
VLNSIIR

Sequences:

>Translated_727_residues
MSLNLALSAGISGLQTAQKGLDLVSHNLANINTPGYTRKIFNPESVVLNGSGVGVQTGTIARRVDEGLNRDLREELAKYT
EYKTKASYYQRMQDLFGKPASNNSISHNLTAFGQQFDTLALETDKSTQQMATVRSAQELTSQFNTISTRLQQMRLTADQD
IAGAVAEVNGHLKNIDTLNDEITLGVATGRDVTDLQDKRDLEVQQLTELVDVTTFERPGGALVVYTKGGSTLLDADPIPV
SFTASSSVTAWDSKGGGDFSAISVGGSDITGEIGAGKLAALIDMRDKTVPAYQSQMDELAGKFSDSINQIHNRGTSQPTI
ANSYSGTTTFIAPATQTMALTTGDVAITLFNADGTQKATTTLKTIVPAVATGEDISTVTTAIQTWLNSGTGGGLTGATAT
VDANGKVQIKLGTNTASLAFRDQASTTAGSTAGDVTIAYDADGNGTTDQTVSGFANFLGLNDMFVANRGQWMADSDVKAQ
NWTPNVGGALTFYDSNNPPGGTAIGTLTIAPNETLKDIALKINSDTALSAKLEAEVVQDGDGYRLRIKDRAGKDMVITQT
AGVGTGLIEQLGLKDSKAGLSGQLRVNQSLLDDSSRISRGAVLFNSDTGQYYISAGDNTTANQLAKSFQTAVSFDAAGGV
TTGARSFSDYAALTLSQNASEASAVATTVSYQSQLADTLQLKSAEISAVNMDEELSQLLVWEQMYRASAKVISAAADMLD
VLNSIIR
>Mature_726_residues
SLNLALSAGISGLQTAQKGLDLVSHNLANINTPGYTRKIFNPESVVLNGSGVGVQTGTIARRVDEGLNRDLREELAKYTE
YKTKASYYQRMQDLFGKPASNNSISHNLTAFGQQFDTLALETDKSTQQMATVRSAQELTSQFNTISTRLQQMRLTADQDI
AGAVAEVNGHLKNIDTLNDEITLGVATGRDVTDLQDKRDLEVQQLTELVDVTTFERPGGALVVYTKGGSTLLDADPIPVS
FTASSSVTAWDSKGGGDFSAISVGGSDITGEIGAGKLAALIDMRDKTVPAYQSQMDELAGKFSDSINQIHNRGTSQPTIA
NSYSGTTTFIAPATQTMALTTGDVAITLFNADGTQKATTTLKTIVPAVATGEDISTVTTAIQTWLNSGTGGGLTGATATV
DANGKVQIKLGTNTASLAFRDQASTTAGSTAGDVTIAYDADGNGTTDQTVSGFANFLGLNDMFVANRGQWMADSDVKAQN
WTPNVGGALTFYDSNNPPGGTAIGTLTIAPNETLKDIALKINSDTALSAKLEAEVVQDGDGYRLRIKDRAGKDMVITQTA
GVGTGLIEQLGLKDSKAGLSGQLRVNQSLLDDSSRISRGAVLFNSDTGQYYISAGDNTTANQLAKSFQTAVSFDAAGGVT
TGARSFSDYAALTLSQNASEASAVATTVSYQSQLADTLQLKSAEISAVNMDEELSQLLVWEQMYRASAKVISAAADMLDV
LNSIIR

Specific function: Unknown

COG id: COG1256

COG function: function code N; Flagellar hook-associated protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum (By similarity) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787323, Length=354, Percent_Identity=24.5762711864407, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR002371
- InterPro:   IPR010810 [H]

Pfam domain/function: PF06429 DUF1078; PF07196 Flagellin_IN [H]

EC number: NA

Molecular weight: Translated: 76427; Mature: 76295

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLNLALSAGISGLQTAQKGLDLVSHNLANINTPGYTRKIFNPESVVLNGSGVGVQTGTI
CCEEEEHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCEEEECCCCCCEECHHH
ARRVDEGLNRDLREELAKYTEYKTKASYYQRMQDLFGKPASNNSISHNLTAFGQQFDTLA
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCEEE
LETDKSTQQMATVRSAQELTSQFNTISTRLQQMRLTADQDIAGAVAEVNGHLKNIDTLND
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCC
EITLGVATGRDVTDLQDKRDLEVQQLTELVDVTTFERPGGALVVYTKGGSTLLDADPIPV
EEEEEEECCCCCHHCCCCCCCCHHHHHHHHHHHEEECCCCEEEEEECCCCEEECCCCCCE
SFTASSSVTAWDSKGGGDFSAISVGGSDITGEIGAGKLAALIDMRDKTVPAYQSQMDELA
EEECCCCEEECCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHH
GKFSDSINQIHNRGTSQPTIANSYSGTTTFIAPATQTMALTTGDVAITLFNADGTQKATT
HHHHHHHHHHHHCCCCCCCEECCCCCCEEEEECCCEEEEEEECCEEEEEECCCCCCHHHH
TLKTIVPAVATGEDISTVTTAIQTWLNSGTGGGLTGATATVDANGKVQIKLGTNTASLAF
HHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCEEEEEECCCCEEEEE
RDQASTTAGSTAGDVTIAYDADGNGTTDQTVSGFANFLGLNDMFVANRGQWMADSDVKAQ
ECCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCC
NWTPNVGGALTFYDSNNPPGGTAIGTLTIAPNETLKDIALKINSDTALSAKLEAEVVQDG
CCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCEEEEEEEEEEEECC
DGYRLRIKDRAGKDMVITQTAGVGTGLIEQLGLKDSKAGLSGQLRVNQSLLDDSSRISRG
CCEEEEEECCCCCCEEEEECCCCCHHHHHHHCCCCCCCCCCCEEEECHHHHCCCHHHCCC
AVLFNSDTGQYYISAGDNTTANQLAKSFQTAVSFDAAGGVTTGARSFSDYAALTLSQNAS
EEEEECCCCEEEEECCCCCCHHHHHHHHHHHHEECCCCCCCCCCCCCCCEEEEEEECCCC
EASAVATTVSYQSQLADTLQLKSAEISAVNMDEELSQLLVWEQMYRASAKVISAAADMLD
HHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLNSIIR
HHHHHCC
>Mature Secondary Structure 
SLNLALSAGISGLQTAQKGLDLVSHNLANINTPGYTRKIFNPESVVLNGSGVGVQTGTI
CEEEEHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCEEEECCCCCCEECHHH
ARRVDEGLNRDLREELAKYTEYKTKASYYQRMQDLFGKPASNNSISHNLTAFGQQFDTLA
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCEEE
LETDKSTQQMATVRSAQELTSQFNTISTRLQQMRLTADQDIAGAVAEVNGHLKNIDTLND
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCC
EITLGVATGRDVTDLQDKRDLEVQQLTELVDVTTFERPGGALVVYTKGGSTLLDADPIPV
EEEEEEECCCCCHHCCCCCCCCHHHHHHHHHHHEEECCCCEEEEEECCCCEEECCCCCCE
SFTASSSVTAWDSKGGGDFSAISVGGSDITGEIGAGKLAALIDMRDKTVPAYQSQMDELA
EEECCCCEEECCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHH
GKFSDSINQIHNRGTSQPTIANSYSGTTTFIAPATQTMALTTGDVAITLFNADGTQKATT
HHHHHHHHHHHHCCCCCCCEECCCCCCEEEEECCCEEEEEEECCEEEEEECCCCCCHHHH
TLKTIVPAVATGEDISTVTTAIQTWLNSGTGGGLTGATATVDANGKVQIKLGTNTASLAF
HHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCEEEEEECCCCEEEEE
RDQASTTAGSTAGDVTIAYDADGNGTTDQTVSGFANFLGLNDMFVANRGQWMADSDVKAQ
ECCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCC
NWTPNVGGALTFYDSNNPPGGTAIGTLTIAPNETLKDIALKINSDTALSAKLEAEVVQDG
CCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCEEEEEEEEEEEECC
DGYRLRIKDRAGKDMVITQTAGVGTGLIEQLGLKDSKAGLSGQLRVNQSLLDDSSRISRG
CCEEEEEECCCCCCEEEEECCCCCHHHHHHHCCCCCCCCCCCEEEECHHHHCCCHHHCCC
AVLFNSDTGQYYISAGDNTTANQLAKSFQTAVSFDAAGGVTTGARSFSDYAALTLSQNAS
EEEEECCCCEEEEECCCCCCHHHHHHHHHHHHEECCCCCCCCCCCCCCCEEEEEEECCCC
EASAVATTVSYQSQLADTLQLKSAEISAVNMDEELSQLLVWEQMYRASAKVISAAADMLD
HHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLNSIIR
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]