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The map label for this gene is flgF [H]

Identifier: 83594174

GI number: 83594174

Start: 3273501

End: 3274238

Strand: Direct

Name: flgF [H]

Synonym: Rru_A2842

Alternate gene names: 83594174

Gene position: 3273501-3274238 (Clockwise)

Preceding gene: 83594162

Following gene: 83594175

Centisome position: 75.2

GC content: 61.25

Gene sequence:

>738_bases
ATGGAAAACACGTCCTACATAGCCCTGTCGCGGCAAACCGCCCTTTGGCGGCAATTGGACGTCGTTTCCAACAACCTCGC
CAATATGAACACCAACGGCTATCAGGCCGAGCAGACGCTGTTCTCGGAATATCTGATGAACACCCGGGACAGCCATTTCC
GCCTGCCCGAGAAGCTGGCCTATACCCAGGACGCCGGAACCTACCGCGACCTGACCGCCGGGCCGCTGGAACACACGGGC
AATCCCTTGGATCTGGCGATCAACGGCGAGGGCTATTTCGAGGTCGAGGACGGCGCCGGCCCGGCTTACACCCGGGGGGG
GCGCTTCACCCTGGACGCCGAGGGCAAGGTAGTGACCGCCGATGGCCGGCCGCTGATGACCGATGCCGGAACGCCGCTGG
TCATCGCCCCTAACGAGGGCGAGGTGACGATCTCGGCGACCGGCACGGTGTCGACCGAGAACGGCCCGGTAGGCAAACTT
CGCCTGGTCAGCTTCGAAGACGAGCAGAAACTGCGCCGCATCGGCGGCGGATTGTTCGACAGCGGCGACCAGCAGGCCAA
TCCGATCACCGAGCCGCGCATCGAGCAGGGGATGATCGAGAAATCGAACGTCAATCCGGTGGTCGAAATGACCCGGATGA
TTCAGGTGCAGCGCTCGTATGAGGCGGCGAACAAATTGATAGAATCCGAGAATGATCGGCAATTGAATGCCTATGCCGTG
CTTTCGGGAACCAAATAA

Upstream 100 bases:

>100_bases
GGCGCTAGACCGCGGATTTCCGCCCTTGGCACGGGTCATGCATCACTTTCCCCGAGTTTCTCTGCCACGCCCGAAGCTGG
CCCGGACCGGATGAGCGCCG

Downstream 100 bases:

>100_bases
AGGCCGGATCGGCGACGCGATATAAGGACCAGGGACGATGAGAGCACTCAATATCGGCGCGACCGGCATGTTGGCCCAAC
AGACCAACGTCGAGGTCATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MENTSYIALSRQTALWRQLDVVSNNLANMNTNGYQAEQTLFSEYLMNTRDSHFRLPEKLAYTQDAGTYRDLTAGPLEHTG
NPLDLAINGEGYFEVEDGAGPAYTRGGRFTLDAEGKVVTADGRPLMTDAGTPLVIAPNEGEVTISATGTVSTENGPVGKL
RLVSFEDEQKLRRIGGGLFDSGDQQANPITEPRIEQGMIEKSNVNPVVEMTRMIQVQRSYEAANKLIESENDRQLNAYAV
LSGTK

Sequences:

>Translated_245_residues
MENTSYIALSRQTALWRQLDVVSNNLANMNTNGYQAEQTLFSEYLMNTRDSHFRLPEKLAYTQDAGTYRDLTAGPLEHTG
NPLDLAINGEGYFEVEDGAGPAYTRGGRFTLDAEGKVVTADGRPLMTDAGTPLVIAPNEGEVTISATGTVSTENGPVGKL
RLVSFEDEQKLRRIGGGLFDSGDQQANPITEPRIEQGMIEKSNVNPVVEMTRMIQVQRSYEAANKLIESENDRQLNAYAV
LSGTK
>Mature_245_residues
MENTSYIALSRQTALWRQLDVVSNNLANMNTNGYQAEQTLFSEYLMNTRDSHFRLPEKLAYTQDAGTYRDLTAGPLEHTG
NPLDLAINGEGYFEVEDGAGPAYTRGGRFTLDAEGKVVTADGRPLMTDAGTPLVIAPNEGEVTISATGTVSTENGPVGKL
RLVSFEDEQKLRRIGGGLFDSGDQQANPITEPRIEQGMIEKSNVNPVVEMTRMIQVQRSYEAANKLIESENDRQLNAYAV
LSGTK

Specific function: Unknown

COG id: COG4786

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787318, Length=263, Percent_Identity=33.8403041825095, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1787317, Length=258, Percent_Identity=31.0077519379845, Blast_Score=99, Evalue=2e-22,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR020013
- InterPro:   IPR012836 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 26839; Mature: 26839

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENTSYIALSRQTALWRQLDVVSNNLANMNTNGYQAEQTLFSEYLMNTRDSHFRLPEKLA
CCCCEEEEEECHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHH
YTQDAGTYRDLTAGPLEHTGNPLDLAINGEGYFEVEDGAGPAYTRGGRFTLDAEGKVVTA
CCCCCCCCCCCCCCCHHHCCCEEEEEECCCEEEEEECCCCCCEECCCCEEEECCCEEEEE
DGRPLMTDAGTPLVIAPNEGEVTISATGTVSTENGPVGKLRLVSFEDEQKLRRIGGGLFD
CCCEEEECCCCEEEEECCCCCEEEEECCEEECCCCCCCEEEEEEECHHHHHHHHCCCCCC
SGDQQANPITEPRIEQGMIEKSNVNPVVEMTRMIQVQRSYEAANKLIESENDRQLNAYAV
CCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEE
LSGTK
EECCC
>Mature Secondary Structure
MENTSYIALSRQTALWRQLDVVSNNLANMNTNGYQAEQTLFSEYLMNTRDSHFRLPEKLA
CCCCEEEEEECHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHH
YTQDAGTYRDLTAGPLEHTGNPLDLAINGEGYFEVEDGAGPAYTRGGRFTLDAEGKVVTA
CCCCCCCCCCCCCCCHHHCCCEEEEEECCCEEEEEECCCCCCEECCCCEEEECCCEEEEE
DGRPLMTDAGTPLVIAPNEGEVTISATGTVSTENGPVGKLRLVSFEDEQKLRRIGGGLFD
CCCEEEECCCCEEEEECCCCCEEEEECCEEECCCCCCCEEEEEEECHHHHHHHHCCCCCC
SGDQQANPITEPRIEQGMIEKSNVNPVVEMTRMIQVQRSYEAANKLIESENDRQLNAYAV
CCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEE
LSGTK
EECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1474584; 11259647 [H]