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The map label for this gene is fliM [H]

Identifier: 83594172

GI number: 83594172

Start: 3271378

End: 3272532

Strand: Reverse

Name: fliM [H]

Synonym: Rru_A2840

Alternate gene names: 83594172

Gene position: 3272532-3271378 (Counterclockwise)

Preceding gene: 83594173

Following gene: 83594171

Centisome position: 75.18

GC content: 60.78

Gene sequence:

>1155_bases
ATGGTGCCCGCCGACGACGATCCTAAAAAGGAAGTCTCGCCCGACGACGAGAAGGCCATGATGGCCGAATGGGAATCCAT
GGTCGGTGGCGAAGACGAGCCGGCCGCGGACGGCGATGAGGCCGGCGGCGCGGCCGAATGGGAAACCATGCTGGCCGATG
AGGGCGGCGAGGGCGAAGGCGGCATGACCGGCTCGGCCCGCGTTCTCAATCAGGACGAGATCGATAGCCTGCTCGGCTTC
AGCGAGGCCGAGGATTCCGGCACCGACAAATCGGGCATCCAGGCGATCATCTCCACCGCCCTGGTGTCTTATGAACGCCT
GCCGATGCTCGAAGTGGTCTTCGACCGGCTGGTGCGCATGATGTCGACGTCGCTGCGCAATTTCACCAGCGACAACGTCG
AGGTCTCGCTCGACAACATCCAATCCTATCGCTTCGGCGACTACCTGAATTCGATCCCGCTGCCGGCCATGCTTTCGGTG
TTCAAGGCCGAGGAATGGGACAATTACGGGTTGCTGACCATCGATTCGTCGATGATCTATTCCATCGTCGACGTGCTTTT
GGGCGGACGTCGCGGCACGGCGGCGATGCGCATCGAGGGGCGGCCCTATACCACCATCGAACGCAATCTGGTCGAGCGTC
TGGTCCATGTGGTGCTGGCCGATCTGTCGGCCGCCTTCGATCCGCTGTCGCCGGTCACCTTCCGCTTCGACCGGCTGGAG
ACCAATCCGCGCTTCGCCACCATCTCGCGGCCGTCGAACGCCGCCATCGTCGCCAAGCTGCGAATCGATATGGAGGATCG
CGGCGGTCGCCTTGACATGCTGATCCCCTATGCGACCCTGGAGCCGGTCCGCGAACTGCTGCTTCAGATGTTCATGGGCG
AGAAGTTCGGTCGCGACAGCATTTGGGAAACCCATCTGGCCGAGGAAATGTGGTCGACCGAGGTGCAGATGGACGCCATC
CTTGACGAGGTTTACATGCCATTGAACAAGATCTTGTCGATGGAGGTCGGCTCGCAGATCCTGTTCAACGCGACTCCGGA
TTCCACCGTGCAACTTCGCTGCGGCGATGTTCCCATGTTCGATGGCAAAATGGGACGCAAGGGGCAAAACATCGCCATTC
GTGTCGACAGCAAGCATAATCGAGCAAAATCGTGA

Upstream 100 bases:

>100_bases
CGCCGCCGCTCCGGCCCGCGTCGAGGACGTTCTCTTCAAAGAAATGCTGATCCAGTAGCGGTCTGTCCGCCGGTTCGCGG
ATGTTAAGGAAATAACGCCC

Downstream 100 bases:

>100_bases
CTATCCCCTGGCAAGTTCTCCTCGACGGAACCATCGCGCTTCTGCTTTCGGTCTTCATCGGCTATGCGATCTTGTTGTCG
CGTCAGCTGCGGGAGTTGCG

Product: flagellar motor switch protein FliM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MVPADDDPKKEVSPDDEKAMMAEWESMVGGEDEPAADGDEAGGAAEWETMLADEGGEGEGGMTGSARVLNQDEIDSLLGF
SEAEDSGTDKSGIQAIISTALVSYERLPMLEVVFDRLVRMMSTSLRNFTSDNVEVSLDNIQSYRFGDYLNSIPLPAMLSV
FKAEEWDNYGLLTIDSSMIYSIVDVLLGGRRGTAAMRIEGRPYTTIERNLVERLVHVVLADLSAAFDPLSPVTFRFDRLE
TNPRFATISRPSNAAIVAKLRIDMEDRGGRLDMLIPYATLEPVRELLLQMFMGEKFGRDSIWETHLAEEMWSTEVQMDAI
LDEVYMPLNKILSMEVGSQILFNATPDSTVQLRCGDVPMFDGKMGRKGQNIAIRVDSKHNRAKS

Sequences:

>Translated_384_residues
MVPADDDPKKEVSPDDEKAMMAEWESMVGGEDEPAADGDEAGGAAEWETMLADEGGEGEGGMTGSARVLNQDEIDSLLGF
SEAEDSGTDKSGIQAIISTALVSYERLPMLEVVFDRLVRMMSTSLRNFTSDNVEVSLDNIQSYRFGDYLNSIPLPAMLSV
FKAEEWDNYGLLTIDSSMIYSIVDVLLGGRRGTAAMRIEGRPYTTIERNLVERLVHVVLADLSAAFDPLSPVTFRFDRLE
TNPRFATISRPSNAAIVAKLRIDMEDRGGRLDMLIPYATLEPVRELLLQMFMGEKFGRDSIWETHLAEEMWSTEVQMDAI
LDEVYMPLNKILSMEVGSQILFNATPDSTVQLRCGDVPMFDGKMGRKGQNIAIRVDSKHNRAKS
>Mature_384_residues
MVPADDDPKKEVSPDDEKAMMAEWESMVGGEDEPAADGDEAGGAAEWETMLADEGGEGEGGMTGSARVLNQDEIDSLLGF
SEAEDSGTDKSGIQAIISTALVSYERLPMLEVVFDRLVRMMSTSLRNFTSDNVEVSLDNIQSYRFGDYLNSIPLPAMLSV
FKAEEWDNYGLLTIDSSMIYSIVDVLLGGRRGTAAMRIEGRPYTTIERNLVERLVHVVLADLSAAFDPLSPVTFRFDRLE
TNPRFATISRPSNAAIVAKLRIDMEDRGGRLDMLIPYATLEPVRELLLQMFMGEKFGRDSIWETHLAEEMWSTEVQMDAI
LDEVYMPLNKILSMEVGSQILFNATPDSTVQLRCGDVPMFDGKMGRKGQNIAIRVDSKHNRAKS

Specific function: FliM is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the mot

COG id: COG1868

COG function: function code N; Flagellar motor switch protein

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein. Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliM family [H]

Homologues:

Organism=Escherichia coli, GI1788255, Length=317, Percent_Identity=23.9747634069401, Blast_Score=110, Evalue=2e-25,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001689
- InterPro:   IPR001543 [H]

Pfam domain/function: PF02154 FliM; PF01052 SpoA [H]

EC number: NA

Molecular weight: Translated: 42606; Mature: 42606

Theoretical pI: Translated: 4.18; Mature: 4.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVPADDDPKKEVSPDDEKAMMAEWESMVGGEDEPAADGDEAGGAAEWETMLADEGGEGEG
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCC
GMTGSARVLNQDEIDSLLGFSEAEDSGTDKSGIQAIISTALVSYERLPMLEVVFDRLVRM
CCCCCCEECCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
MSTSLRNFTSDNVEVSLDNIQSYRFGDYLNSIPLPAMLSVFKAEEWDNYGLLTIDSSMIY
HHHHHHHCCCCCEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEECHHHHH
SIVDVLLGGRRGTAAMRIEGRPYTTIERNLVERLVHVVLADLSAAFDPLSPVTFRFDRLE
HHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEC
TNPRFATISRPSNAAIVAKLRIDMEDRGGRLDMLIPYATLEPVRELLLQMFMGEKFGRDS
CCCCEEEEECCCCCEEEEEEEEEECCCCCEEEEEECHHHHHHHHHHHHHHHHCCCCCCCH
IWETHLAEEMWSTEVQMDAILDEVYMPLNKILSMEVGSQILFNATPDSTVQLRCGDVPMF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEECCCCCC
DGKMGRKGQNIAIRVDSKHNRAKS
CCCCCCCCCEEEEEECCCCCCCCC
>Mature Secondary Structure
MVPADDDPKKEVSPDDEKAMMAEWESMVGGEDEPAADGDEAGGAAEWETMLADEGGEGEG
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCC
GMTGSARVLNQDEIDSLLGFSEAEDSGTDKSGIQAIISTALVSYERLPMLEVVFDRLVRM
CCCCCCEECCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
MSTSLRNFTSDNVEVSLDNIQSYRFGDYLNSIPLPAMLSVFKAEEWDNYGLLTIDSSMIY
HHHHHHHCCCCCEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEECHHHHH
SIVDVLLGGRRGTAAMRIEGRPYTTIERNLVERLVHVVLADLSAAFDPLSPVTFRFDRLE
HHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEC
TNPRFATISRPSNAAIVAKLRIDMEDRGGRLDMLIPYATLEPVRELLLQMFMGEKFGRDS
CCCCEEEEECCCCCEEEEEEEEEECCCCCEEEEEECHHHHHHHHHHHHHHHHCCCCCCCH
IWETHLAEEMWSTEVQMDAILDEVYMPLNKILSMEVGSQILFNATPDSTVQLRCGDVPMF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEECCCCCC
DGKMGRKGQNIAIRVDSKHNRAKS
CCCCCCCCCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1315735 [H]