| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is flhB [H]
Identifier: 83594153
GI number: 83594153
Start: 3255856
End: 3256926
Strand: Reverse
Name: flhB [H]
Synonym: Rru_A2821
Alternate gene names: 83594153
Gene position: 3256926-3255856 (Counterclockwise)
Preceding gene: 83594154
Following gene: 83594152
Centisome position: 74.82
GC content: 61.62
Gene sequence:
>1071_bases ATGGCCGACGACGACAAGGACTCCAAGACCGAGGACCCCAGTTCGCGCAAGCTTGGCAAAGCTCGCGAAGACGGTCAGGT CGCGCAGTCCCAGGAGGTCAAAAGCTTTCTGATGCTGGGCGGCGCCTTGTTCATGGTCGCCGTGATGGGCGGCTGGATCG CCGACAAGGTGGCGCTGCGGGTCCGCGTTTTTCTTGAGCAACCCGACACCTTCCATCTGGATGCCGTGGGCCTGCGCGAT CTGCTGGCCCGGCTGCTGCTTGATATCGGGCTGGTGCTGGCGATGCCGATCGCCATGTTCATCGTGCTGGCGATTTTGGG GGGCGTTGGGCAGTTCGGCCTGATCTTTTCGGCCAAGAAGATAACCCCGGAATTGCAGAAGATCAGCCCGCTCGCCGGCT TCAAGCGGCTGTTTTCGGTGCGCGCCCTGGTCGAAGGCGTCAAGGGCATCGTCAAGGTGGTGGTGGTCAGCGCCATCGTC GCCGCCTTGATGCTGCCCCGGCTGCGCACGCCCGAGCTGTTCATGGACCAGGATATCCTGGTCACCCTGGGGCAAATCCA CCGGCTTCTGGTGGTTTTGCTGATCTCGGTGGTCACCATCGTCGGCGCCATCGCCGCCGCCGATTTCGCCTTTCAGAAGT ACAAGCACATCGAAGAACTGAAGATGACCAAGCAGGAGGTCAAGGACGAGCATAAGAACGCCGAAGGCGATCCGCAGATC AAAAGCAAGATCCGCCAGCTGCGCATGCGCCGCGCCCGCGAAAGGATGATGGCCCGCGTGCCCGAGGCCAGCGTTGTCAT CACCAACCCGACCCACTTCGCCGTGGCCTTGAAATACGATATGGACATGATGTCGGCGCCGGTGCTGGTCGCCAAAGGCC AGGACTTCATCGCGCTCAAGATCCGCGAAGTCGCCGAGGAGAACGAGGTGCCCATCGTTGAAAACCCGCCGCTTGCCCGG GCCTTGTTCGCCGCCGTCGAGATCGATCATGAAATTCCCCCCGACCACTACAAGGCGGTGGCCGAGGTGATCGGCTATGT CATGCGCCTGAAGAAGGCGACGAAGAGATAG
Upstream 100 bases:
>100_bases CATTTCGAGCGCGGGCTGATCAATCTGGCGATGCCTTGAGACGCCTTAAGGCGTCTTGAAGGGGAGCCGCGTTTCCTGAG ACCAGCCACGAAAGGGCGTC
Downstream 100 bases:
>100_bases CATGAGTGACGCGGTGCTGATTCGCGAGCCGGCCCTGTGGGGGCTGGGGGCGGGCCTGGGCGGGGCGCTGGCGGGCGGCT TGTGGTCGGCCCTGGGCGAA
Product: flagellar biosynthesis protein FlhB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 356; Mature: 355
Protein sequence:
>356_residues MADDDKDSKTEDPSSRKLGKAREDGQVAQSQEVKSFLMLGGALFMVAVMGGWIADKVALRVRVFLEQPDTFHLDAVGLRD LLARLLLDIGLVLAMPIAMFIVLAILGGVGQFGLIFSAKKITPELQKISPLAGFKRLFSVRALVEGVKGIVKVVVVSAIV AALMLPRLRTPELFMDQDILVTLGQIHRLLVVLLISVVTIVGAIAAADFAFQKYKHIEELKMTKQEVKDEHKNAEGDPQI KSKIRQLRMRRARERMMARVPEASVVITNPTHFAVALKYDMDMMSAPVLVAKGQDFIALKIREVAEENEVPIVENPPLAR ALFAAVEIDHEIPPDHYKAVAEVIGYVMRLKKATKR
Sequences:
>Translated_356_residues MADDDKDSKTEDPSSRKLGKAREDGQVAQSQEVKSFLMLGGALFMVAVMGGWIADKVALRVRVFLEQPDTFHLDAVGLRD LLARLLLDIGLVLAMPIAMFIVLAILGGVGQFGLIFSAKKITPELQKISPLAGFKRLFSVRALVEGVKGIVKVVVVSAIV AALMLPRLRTPELFMDQDILVTLGQIHRLLVVLLISVVTIVGAIAAADFAFQKYKHIEELKMTKQEVKDEHKNAEGDPQI KSKIRQLRMRRARERMMARVPEASVVITNPTHFAVALKYDMDMMSAPVLVAKGQDFIALKIREVAEENEVPIVENPPLAR ALFAAVEIDHEIPPDHYKAVAEVIGYVMRLKKATKR >Mature_355_residues ADDDKDSKTEDPSSRKLGKAREDGQVAQSQEVKSFLMLGGALFMVAVMGGWIADKVALRVRVFLEQPDTFHLDAVGLRDL LARLLLDIGLVLAMPIAMFIVLAILGGVGQFGLIFSAKKITPELQKISPLAGFKRLFSVRALVEGVKGIVKVVVVSAIVA ALMLPRLRTPELFMDQDILVTLGQIHRLLVVLLISVVTIVGAIAAADFAFQKYKHIEELKMTKQEVKDEHKNAEGDPQIK SKIRQLRMRRARERMMARVPEASVVITNPTHFAVALKYDMDMMSAPVLVAKGQDFIALKIREVAEENEVPIVENPPLARA LFAAVEIDHEIPPDHYKAVAEVIGYVMRLKKATKR
Specific function: May be involved in the export of flagellum proteins [H]
COG id: COG1377
COG function: function code NU; Flagellar biosynthesis pathway, component FlhB
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the type III secretion exporter family [H]
Homologues:
Organism=Escherichia coli, GI1788188, Length=365, Percent_Identity=37.2602739726027, Blast_Score=214, Evalue=1e-56,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006136 - InterPro: IPR006135 [H]
Pfam domain/function: PF01312 Bac_export_2 [H]
EC number: NA
Molecular weight: Translated: 39402; Mature: 39271
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADDDKDSKTEDPSSRKLGKAREDGQVAQSQEVKSFLMLGGALFMVAVMGGWIADKVALR CCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VRVFLEQPDTFHLDAVGLRDLLARLLLDIGLVLAMPIAMFIVLAILGGVGQFGLIFSAKK HHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH ITPELQKISPLAGFKRLFSVRALVEGVKGIVKVVVVSAIVAALMLPRLRTPELFMDQDIL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHH VTLGQIHRLLVVLLISVVTIVGAIAAADFAFQKYKHIEELKMTKQEVKDEHKNAEGDPQI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH KSKIRQLRMRRARERMMARVPEASVVITNPTHFAVALKYDMDMMSAPVLVAKGQDFIALK HHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEEEEECHHHHHCCEEEECCCCEEEHH IREVAEENEVPIVENPPLARALFAAVEIDHEIPPDHYKAVAEVIGYVMRLKKATKR HHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ADDDKDSKTEDPSSRKLGKAREDGQVAQSQEVKSFLMLGGALFMVAVMGGWIADKVALR CCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VRVFLEQPDTFHLDAVGLRDLLARLLLDIGLVLAMPIAMFIVLAILGGVGQFGLIFSAKK HHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH ITPELQKISPLAGFKRLFSVRALVEGVKGIVKVVVVSAIVAALMLPRLRTPELFMDQDIL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHH VTLGQIHRLLVVLLISVVTIVGAIAAADFAFQKYKHIEELKMTKQEVKDEHKNAEGDPQI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH KSKIRQLRMRRARERMMARVPEASVVITNPTHFAVALKYDMDMMSAPVLVAKGQDFIALK HHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEEEEECHHHHHCCEEEECCCCEEEHH IREVAEENEVPIVENPPLARALFAAVEIDHEIPPDHYKAVAEVIGYVMRLKKATKR HHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8299954; 9384377 [H]