| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594142
Identifier: 83594142
GI number: 83594142
Start: 3243162
End: 3244304
Strand: Direct
Name: 83594142
Synonym: Rru_A2810
Alternate gene names: NA
Gene position: 3243162-3244304 (Clockwise)
Preceding gene: 83594134
Following gene: 83594143
Centisome position: 74.51
GC content: 68.33
Gene sequence:
>1143_bases ATGACGCGCATCCTTCTTCTCGGCGGCGGTAAGATCGGCGAGGCCATCGCCACCCTTTTGGGCGAAAGCGGCGATTATCA AATCGTCGTCGGCGATCGCAGCGCGCAGGCTTTGGCCGGGGTCGCGGCCTTGCCCGGGGTCACCCCCCTGGTGATCGACG CCAGCGACGAGGACGCGGTGGCGGCGGCGGCCGGCGGCGCCTTCGCTATCCTCAGCGCCTGTCCGTTTTTTTTAACCGTC GGCATCGCCCGGGCGGCGCGCCGCGCCGGCGCCCATTATCTCGATCTGACCGAGGACGTGGCCTCGACCGCCGAGGTCAG GGCCCTGGCCGAGGGGGCGACCAGCGCCTTCATTCCCCAATGCGGTCTGGCGCCCGGCTTCATTTCGATCGCCGCCAACG ATCTGGCGCAGAGTTTCGATAGCCTCGACTCCTTGCGTCTGCGCGTCGGCGCCCTGCCGCGTTTTCCCACCAACGGGCTC AAGTACAACCTTTCCTGGAGCACCCAGGGGCTGGTCAATGAATATCTCCGCCCCTGCGAGGCCATCGTCGATGGCCGGCT GACGACGGTGCAGCCGATGGACGGCCTGGAGAGCTTCTCGCTTGATGGCGTGGCCTATGAGGCCTTCAATACCTCGGGCG GTCTGGGCAGCCTGTGCGAGACCTATGCCGGGCGGCTGCGCGCCCTTGATTACCGCTCGGTGCGCTATCCCGGCCATTGC GCGCTGATGAAGGTGCTGCTTGATGATCTGGGGCTGTCGCGCCGCCCGGAGCTGCTGTGCGAGCTGCTCGACGCCGGCCT GCCGATCACCGCCCAGGACATGGTGCTGGTGCTGGTCACGGCGCGCGGCCAGCGCCAGGGGCGCTTCATCGAGGAAAGCC TGATCAGCCGCATTTTCGGCAAGCCGGTGGCCGGGCGCCAACTGAGCGCCATCGGCCTCACCACCGCCTCGGGCATCACC GCCGTTCTCGACCTGCTGGTCGAAGGCGCCCTGCCCGATCGCGGCCTGATCCGCCAAGAAGACATCCCCTTGCCGCTGTT TCGCGCCAACCGCTTCGGCCGCAATTATTGGCCCGACGAGGCCGAGGCGGCCCAAGGCGCGCAGGCGCCGGCGCGCCCCA GCCCCGACCTCTGTCCCGCCTGA
Upstream 100 bases:
>100_bases TCGGAAAAACCGCCGGTCTGGCGACGTTCCATGGCGTTCCGTCCGACACGAAGGGGTGCTTCCCTAAAGAAATAGTCGAT CACCACGGAGGGTCTTGACC
Downstream 100 bases:
>100_bases TCGTCTTTAACCGCGTCGGGGCGGCGAGCGGTCTGGCTTTTTGGAAGGAGTCTGGCCTATATGGGGGCTTAAAACTTTCC CCCGCGCGCGAGAGAGCATG
Product: saccharopine dehydrogenase
Products: NA
Alternate protein names: Dehydrogenase; L-Lysine Dehydrogenase; Saccharopine Reductase; Saccharopine Dehydrogenase Family Protein; Dehydrogenase Protein; Saccharopine Dehydrogenase Protein; Saccharopine Dehydrogenase And Related Protein; TrkA-NSaccharopine Dehydrogenase; Oxidoreductase; Saccharopine Dehydrogenase Conjectural; Saccharopine Dehydrogenase-Like Protein; Saccharopine Dehydrogenase/Saccharopine Reductase
Number of amino acids: Translated: 380; Mature: 379
Protein sequence:
>380_residues MTRILLLGGGKIGEAIATLLGESGDYQIVVGDRSAQALAGVAALPGVTPLVIDASDEDAVAAAAGGAFAILSACPFFLTV GIARAARRAGAHYLDLTEDVASTAEVRALAEGATSAFIPQCGLAPGFISIAANDLAQSFDSLDSLRLRVGALPRFPTNGL KYNLSWSTQGLVNEYLRPCEAIVDGRLTTVQPMDGLESFSLDGVAYEAFNTSGGLGSLCETYAGRLRALDYRSVRYPGHC ALMKVLLDDLGLSRRPELLCELLDAGLPITAQDMVLVLVTARGQRQGRFIEESLISRIFGKPVAGRQLSAIGLTTASGIT AVLDLLVEGALPDRGLIRQEDIPLPLFRANRFGRNYWPDEAEAAQGAQAPARPSPDLCPA
Sequences:
>Translated_380_residues MTRILLLGGGKIGEAIATLLGESGDYQIVVGDRSAQALAGVAALPGVTPLVIDASDEDAVAAAAGGAFAILSACPFFLTV GIARAARRAGAHYLDLTEDVASTAEVRALAEGATSAFIPQCGLAPGFISIAANDLAQSFDSLDSLRLRVGALPRFPTNGL KYNLSWSTQGLVNEYLRPCEAIVDGRLTTVQPMDGLESFSLDGVAYEAFNTSGGLGSLCETYAGRLRALDYRSVRYPGHC ALMKVLLDDLGLSRRPELLCELLDAGLPITAQDMVLVLVTARGQRQGRFIEESLISRIFGKPVAGRQLSAIGLTTASGIT AVLDLLVEGALPDRGLIRQEDIPLPLFRANRFGRNYWPDEAEAAQGAQAPARPSPDLCPA >Mature_379_residues TRILLLGGGKIGEAIATLLGESGDYQIVVGDRSAQALAGVAALPGVTPLVIDASDEDAVAAAAGGAFAILSACPFFLTVG IARAARRAGAHYLDLTEDVASTAEVRALAEGATSAFIPQCGLAPGFISIAANDLAQSFDSLDSLRLRVGALPRFPTNGLK YNLSWSTQGLVNEYLRPCEAIVDGRLTTVQPMDGLESFSLDGVAYEAFNTSGGLGSLCETYAGRLRALDYRSVRYPGHCA LMKVLLDDLGLSRRPELLCELLDAGLPITAQDMVLVLVTARGQRQGRFIEESLISRIFGKPVAGRQLSAIGLTTASGITA VLDLLVEGALPDRGLIRQEDIPLPLFRANRFGRNYWPDEAEAAQGAQAPARPSPDLCPA
Specific function: Unknown
COG id: COG1748
COG function: function code E; Saccharopine dehydrogenase and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39998; Mature: 39867
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRILLLGGGKIGEAIATLLGESGDYQIVVGDRSAQALAGVAALPGVTPLVIDASDEDAV CCEEEEEECCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCCEEEEECCCCCCH AAAAGGAFAILSACPFFLTVGIARAARRAGAHYLDLTEDVASTAEVRALAEGATSAFIPQ HHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHCCCHHHCCC CGLAPGFISIAANDLAQSFDSLDSLRLRVGALPRFPTNGLKYNLSWSTQGLVNEYLRPCE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHH AIVDGRLTTVQPMDGLESFSLDGVAYEAFNTSGGLGSLCETYAGRLRALDYRSVRYPGHC HHHCCCCEEECCCCCCHHCCCCCEEEEEECCCCCHHHHHHHHHHHHEECCCCCCCCCCHH ALMKVLLDDLGLSRRPELLCELLDAGLPITAQDMVLVLVTARGQRQGRFIEESLISRIFG HHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHC KPVAGRQLSAIGLTTASGITAVLDLLVEGALPDRGLIRQEDIPLPLFRANRFGRNYWPDE CCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCH AEAAQGAQAPARPSPDLCPA HHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure TRILLLGGGKIGEAIATLLGESGDYQIVVGDRSAQALAGVAALPGVTPLVIDASDEDAV CEEEEEECCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCCEEEEECCCCCCH AAAAGGAFAILSACPFFLTVGIARAARRAGAHYLDLTEDVASTAEVRALAEGATSAFIPQ HHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHCCCHHHCCC CGLAPGFISIAANDLAQSFDSLDSLRLRVGALPRFPTNGLKYNLSWSTQGLVNEYLRPCE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHH AIVDGRLTTVQPMDGLESFSLDGVAYEAFNTSGGLGSLCETYAGRLRALDYRSVRYPGHC HHHCCCCEEECCCCCCHHCCCCCEEEEEECCCCCHHHHHHHHHHHHEECCCCCCCCCCHH ALMKVLLDDLGLSRRPELLCELLDAGLPITAQDMVLVLVTARGQRQGRFIEESLISRIFG HHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHC KPVAGRQLSAIGLTTASGITAVLDLLVEGALPDRGLIRQEDIPLPLFRANRFGRNYWPDE CCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCH AEAAQGAQAPARPSPDLCPA HHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA