| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is sam [H]
Identifier: 83594109
GI number: 83594109
Start: 3211736
End: 3212698
Strand: Direct
Name: sam [H]
Synonym: Rru_A2777
Alternate gene names: 83594109
Gene position: 3211736-3212698 (Clockwise)
Preceding gene: 83594105
Following gene: 83594110
Centisome position: 73.79
GC content: 65.52
Gene sequence:
>963_bases ATGGCTTCCCAGCCCTTCGCCGGTTCGCCGGCCGCTCCCCTTCCCATGCCTCCGGCGGAAAATCTTCCCCCCGCCGCGCC CCCGCCCGGCCGCGCCCCCCAGCTGCGCCTGGGGGTGGCCTGTCTGGTCGGCGCCACGGTCATCTTCGCCTTCCAAGACG GGATCACCAAGTATCTTGCCAGCCATTACCCGATTCCGTTCATCGTCATGGTTCGCTATTGGGCTTTTGCCCTGTTCGCC ATCGCCCTGGTCGCCCGCAAGCCGGGCGGCGTAAGGGCGGCGACGCGCAGCAAGCGGCCGATTCTGCAATCCTTGCGCGC CTTGCTGCTGGTCAGCGAAATCGGTCTGGTCGCCCTCGCCTTCCGTCATATGGGGCTGGCCGAGGTGCAATCGATCTTCG CCGTCTATCCGCTGCTGGTGATGGCCATGGCCATCGTTTTGCTGGGCGAGCGGGTCGGCTGGCGGCGCTGGGTGGCGACG GGGGTCGGCTTCATCGGCCTGTTGATCATCGTTCGCCCGGGCGTCGGCACCTTCGAGCCCGCCGCCCTGTACAGTCTGGC CTCGGCCACGATGTACGCCCTTTACACGGTGCTCACCCGCATGGTCAGCGCTGATGACAGCGCCGGCACCACGTTTTTGT ATACGGGAGTGGTCGGAGCCATCCTGGTCACCCTGTTCGGCGGCGCCCATTGGACGGCGATGAGCGGCATCGATTGGGGC TGGATGGCCCTGCTCGCCCTCTTCGGCATGAGCTCGCACTTCCTGCTGATCAAGGCCCTGGAATACGCCCCGGCCTCGGT CCTCCAGCCCTATAATTACCTCAGCCTCGTCTGGTCGGGGATCGTCGGCTATCTGGTCTTCAACAACATCCCCGATCTCG CCACCTTCATCGGCGGCGCGGTGATCGTCGCCTCGGGTCTGTATGTTCTCTACCGCGACCGCAAGGTCAAAGGCCTGCGC TGA
Upstream 100 bases:
>100_bases TCGGCTCTGGCGCCCTTGCCATAACGGATCTAAGCCTTGCCACGCCCGGTCCTGGCCTTCAGTATGAATATTGGATCCCA AAGTGAGCAAGTCCCCCAGC
Downstream 100 bases:
>100_bases CGTGCCGTGGACCATAACGCGGCACATCTGTATAGCGTAGCTTGACACTATACGGTTTGCCTGCCAGTCTCGGCATATGA GACTCCGAAACGTGGTTCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 320; Mature: 319
Protein sequence:
>320_residues MASQPFAGSPAAPLPMPPAENLPPAAPPPGRAPQLRLGVACLVGATVIFAFQDGITKYLASHYPIPFIVMVRYWAFALFA IALVARKPGGVRAATRSKRPILQSLRALLLVSEIGLVALAFRHMGLAEVQSIFAVYPLLVMAMAIVLLGERVGWRRWVAT GVGFIGLLIIVRPGVGTFEPAALYSLASATMYALYTVLTRMVSADDSAGTTFLYTGVVGAILVTLFGGAHWTAMSGIDWG WMALLALFGMSSHFLLIKALEYAPASVLQPYNYLSLVWSGIVGYLVFNNIPDLATFIGGAVIVASGLYVLYRDRKVKGLR
Sequences:
>Translated_320_residues MASQPFAGSPAAPLPMPPAENLPPAAPPPGRAPQLRLGVACLVGATVIFAFQDGITKYLASHYPIPFIVMVRYWAFALFA IALVARKPGGVRAATRSKRPILQSLRALLLVSEIGLVALAFRHMGLAEVQSIFAVYPLLVMAMAIVLLGERVGWRRWVAT GVGFIGLLIIVRPGVGTFEPAALYSLASATMYALYTVLTRMVSADDSAGTTFLYTGVVGAILVTLFGGAHWTAMSGIDWG WMALLALFGMSSHFLLIKALEYAPASVLQPYNYLSLVWSGIVGYLVFNNIPDLATFIGGAVIVASGLYVLYRDRKVKGLR >Mature_319_residues ASQPFAGSPAAPLPMPPAENLPPAAPPPGRAPQLRLGVACLVGATVIFAFQDGITKYLASHYPIPFIVMVRYWAFALFAI ALVARKPGGVRAATRSKRPILQSLRALLLVSEIGLVALAFRHMGLAEVQSIFAVYPLLVMAMAIVLLGERVGWRRWVATG VGFIGLLIIVRPGVGTFEPAALYSLASATMYALYTVLTRMVSADDSAGTTFLYTGVVGAILVTLFGGAHWTAMSGIDWGW MALLALFGMSSHFLLIKALEYAPASVLQPYNYLSLVWSGIVGYLVFNNIPDLATFIGGAVIVASGLYVLYRDRKVKGLR
Specific function: Transports S-adenosylmethionine [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the drug/metabolite transporter (DMT) superfamily. 10 TMS drug/metabolite exporter (TC 2.A.7.3) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 34289; Mature: 34158
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASQPFAGSPAAPLPMPPAENLPPAAPPPGRAPQLRLGVACLVGATVIFAFQDGITKYLA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SHYPIPFIVMVRYWAFALFAIALVARKPGGVRAATRSKRPILQSLRALLLVSEIGLVALA HCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHH FRHMGLAEVQSIFAVYPLLVMAMAIVLLGERVGWRRWVATGVGFIGLLIIVRPGVGTFEP HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH AALYSLASATMYALYTVLTRMVSADDSAGTTFLYTGVVGAILVTLFGGAHWTAMSGIDWG HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCHH WMALLALFGMSSHFLLIKALEYAPASVLQPYNYLSLVWSGIVGYLVFNNIPDLATFIGGA HHHHHHHHCCCCHHHHHHHHHHCCHHHHCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH VIVASGLYVLYRDRKVKGLR HHHHCCHHEEEECCCCCCCC >Mature Secondary Structure ASQPFAGSPAAPLPMPPAENLPPAAPPPGRAPQLRLGVACLVGATVIFAFQDGITKYLA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SHYPIPFIVMVRYWAFALFAIALVARKPGGVRAATRSKRPILQSLRALLLVSEIGLVALA HCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHH FRHMGLAEVQSIFAVYPLLVMAMAIVLLGERVGWRRWVATGVGFIGLLIIVRPGVGTFEP HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH AALYSLASATMYALYTVLTRMVSADDSAGTTFLYTGVVGAILVTLFGGAHWTAMSGIDWG HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCHH WMALLALFGMSSHFLLIKALEYAPASVLQPYNYLSLVWSGIVGYLVFNNIPDLATFIGGA HHHHHHHHCCCCHHHHHHHHHHCCHHHHCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH VIVASGLYVLYRDRKVKGLR HHHHCCHHEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA