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The map label for this gene is rng [H]

Identifier: 83594099

GI number: 83594099

Start: 3201617

End: 3202999

Strand: Reverse

Name: rng [H]

Synonym: Rru_A2767

Alternate gene names: 83594099

Gene position: 3202999-3201617 (Counterclockwise)

Preceding gene: 83594100

Following gene: 83594098

Centisome position: 73.58

GC content: 75.78

Gene sequence:

>1383_bases
ATGGCTGACCCCGGCCGCCAGACCTATCACGTTCTGGTGTCCGATGGGCCGGGCGAAACCCGCTGGGCCCTGCTGGCCGG
GGATACGCCGGTCGAGGTGGTCTTCCAGCGCGCCCATGCGGTGGAAACCGGCGCCATCGTCGCCGGTCGGGTGACCGCCG
CCGTTCCCGGCCATCAGGCGCTGTTCGTCGATCTGGGGCGGGGGCCGGCGGGGTTCCTGGGGGCCGAGGACACGCCGCGC
GGCCTGCCCGGCGAAGGCGCCCTGCTGGCCTTTCAGGTGTTGCGCGAGGCGGTGGCCGGCAAGGGGCCAACGGTGACGGC
TGCGCCGACCCTGGCCGGGCGTTTGCTGGTCTATACCCCTTATGTGCCCGGTGTCGGGCTGTCGCCGCGCGCCGGATCGA
CCGCGGCGCGCAAGGCGCTGCGCGCCCGCATCACCGCTTTGCTCGATCCCGGCGAAGGCGTCGTCGCCCGCACCATCGCC
GGCGAGGCCAGCGAGGCGGCCCTGCGCGCCGAGCTTGATCATCACCGCGCCCGCTGGCGCGCCATCGGCCGGGCGCTGGC
TGCCAGCACCCGCCCGGGCCTGCTGGAGGCCGCCCCCGGTCCGCTGGGCGGCTGGCTTGACAGCCTGGGCGACGCCCTGC
GCTCGGTGGTCGCCGATCAGGGCGAGCGTGCCCAGGCCCTGCGCCGCGCCCTGGCCGCCCGGGGCCCGGACTGGCCGGCC
CGGGTGGTCATCGAACGCGCCGACCAGCCCTTGTTCGAGCGCTGGGGGGTCGAGGAGGCGCTGGAGGCCGCCCTGGCGGT
GCGCTTGGCGCTGCCCGGCGGCGGAGCGATCGCGATCGAGGAAACCGCCGCCCTGACCGCCATCGATGTCGATGCCGGCG
GCGCCGATCGCCGGCTGGTAGCGCCGGTGGCGGCGCGCGAGATCGCCCGCCAGATCCGCCTGCGCGCCCTGGCCGGCCAG
ATCCTGATCGATTTCCCGCGTGGTGCCCGCGGTCCGGAGGAAAGCGGTCTGGTCGCCCTGATCGAGGCCCTGGCCGCCGA
TCCGGCCGGTCCGCGCGTGTTGGGGGTGACGCGGGGCGGACTGGTCGAGGTGGTGCGGCCGCGGCGGCGCCCGCCCTTGT
CCTCGCTGCTGACCGTTCCCGGCGGCCCGCCGAAACTGACGGCCGAGACCGCGCTGCTGGCCGCCTTGCGCGAGCTGGTG
GCCGGGGCGACGCGGGCGCCCGGCGCCCGTCCGCATCTGCGGGTCGGGCCGCGATCGGGCGGGCTGCTCGCCACCGATCT
GGCCCAGGCCCTGGCCGAGGTGGAAGCGGCCCTGGGGCAGGCGGTGGCGATCGATTGCTTTGCCGATCACCCGGAAGACC
GGCCCGAGGCGACGTTTTTCTAG

Upstream 100 bases:

>100_bases
TTTGTGCGCTGGCTGGAAGGCAGTCATTCCAACGTCGTCGGCCTGCCGCTGTTTGAGACCAACGCCCTGCTCGCCGGAAC
GGGCTACCGGCCCGGACGCG

Downstream 100 bases:

>100_bases
GGCCGGGACGGGCCGTTGGGGCGGAGCCCGCCGTCTTGGCATGGCTGCCTCCCGGCTTTCCCCGGGGCTGGAGAGTGGAT
TTTTCGCGCGGGGCGTCCTA

Product: ribonuclease G (RNase G)

Products: NA

Alternate protein names: RNase G; Cytoplasmic axial filament protein [H]

Number of amino acids: Translated: 460; Mature: 459

Protein sequence:

>460_residues
MADPGRQTYHVLVSDGPGETRWALLAGDTPVEVVFQRAHAVETGAIVAGRVTAAVPGHQALFVDLGRGPAGFLGAEDTPR
GLPGEGALLAFQVLREAVAGKGPTVTAAPTLAGRLLVYTPYVPGVGLSPRAGSTAARKALRARITALLDPGEGVVARTIA
GEASEAALRAELDHHRARWRAIGRALAASTRPGLLEAAPGPLGGWLDSLGDALRSVVADQGERAQALRRALAARGPDWPA
RVVIERADQPLFERWGVEEALEAALAVRLALPGGGAIAIEETAALTAIDVDAGGADRRLVAPVAAREIARQIRLRALAGQ
ILIDFPRGARGPEESGLVALIEALAADPAGPRVLGVTRGGLVEVVRPRRRPPLSSLLTVPGGPPKLTAETALLAALRELV
AGATRAPGARPHLRVGPRSGGLLATDLAQALAEVEAALGQAVAIDCFADHPEDRPEATFF

Sequences:

>Translated_460_residues
MADPGRQTYHVLVSDGPGETRWALLAGDTPVEVVFQRAHAVETGAIVAGRVTAAVPGHQALFVDLGRGPAGFLGAEDTPR
GLPGEGALLAFQVLREAVAGKGPTVTAAPTLAGRLLVYTPYVPGVGLSPRAGSTAARKALRARITALLDPGEGVVARTIA
GEASEAALRAELDHHRARWRAIGRALAASTRPGLLEAAPGPLGGWLDSLGDALRSVVADQGERAQALRRALAARGPDWPA
RVVIERADQPLFERWGVEEALEAALAVRLALPGGGAIAIEETAALTAIDVDAGGADRRLVAPVAAREIARQIRLRALAGQ
ILIDFPRGARGPEESGLVALIEALAADPAGPRVLGVTRGGLVEVVRPRRRPPLSSLLTVPGGPPKLTAETALLAALRELV
AGATRAPGARPHLRVGPRSGGLLATDLAQALAEVEAALGQAVAIDCFADHPEDRPEATFF
>Mature_459_residues
ADPGRQTYHVLVSDGPGETRWALLAGDTPVEVVFQRAHAVETGAIVAGRVTAAVPGHQALFVDLGRGPAGFLGAEDTPRG
LPGEGALLAFQVLREAVAGKGPTVTAAPTLAGRLLVYTPYVPGVGLSPRAGSTAARKALRARITALLDPGEGVVARTIAG
EASEAALRAELDHHRARWRAIGRALAASTRPGLLEAAPGPLGGWLDSLGDALRSVVADQGERAQALRRALAARGPDWPAR
VVIERADQPLFERWGVEEALEAALAVRLALPGGGAIAIEETAALTAIDVDAGGADRRLVAPVAAREIARQIRLRALAGQI
LIDFPRGARGPEESGLVALIEALAADPAGPRVLGVTRGGLVEVVRPRRRPPLSSLLTVPGGPPKLTAETALLAALRELVA
GATRAPGARPHLRVGPRSGGLLATDLAQALAEVEAALGQAVAIDCFADHPEDRPEATFF

Specific function: Involved in the processing of the 5'-end of 16S rRNA. Could be involved in chromosome segregation and cell division. It may be one of the components of the cytoplasmic axial filaments bundles or merely regulate the formation of this structure [H]

COG id: COG1530

COG function: function code J; Ribonucleases G and E

Gene ontology:

Cell location: Cytoplasm, cytoskeleton [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Escherichia coli, GI87082235, Length=475, Percent_Identity=29.4736842105263, Blast_Score=136, Evalue=3e-33,
Organism=Escherichia coli, GI1787325, Length=367, Percent_Identity=30.5177111716621, Blast_Score=123, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR019307
- InterPro:   IPR022967
- InterPro:   IPR004659 [H]

Pfam domain/function: PF10150 RNase_E_G; PF00575 S1 [H]

EC number: 3.1.4.- [C]

Molecular weight: Translated: 47470; Mature: 47339

Theoretical pI: Translated: 7.82; Mature: 7.82

Prosite motif: PS00024 HEMOPEXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.2 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADPGRQTYHVLVSDGPGETRWALLAGDTPVEVVFQRAHAVETGAIVAGRVTAAVPGHQA
CCCCCCCEEEEEEECCCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEECCEEEECCCCCE
LFVDLGRGPAGFLGAEDTPRGLPGEGALLAFQVLREAVAGKGPTVTAAPTLAGRLLVYTP
EEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEECHHHHCEEEEEEC
YVPGVGLSPRAGSTAARKALRARITALLDPGEGVVARTIAGEASEAALRAELDHHRARWR
CCCCCCCCCCCCCHHHHHHHHHHHHHEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHH
AIGRALAASTRPGLLEAAPGPLGGWLDSLGDALRSVVADQGERAQALRRALAARGPDWPA
HHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCH
RVVIERADQPLFERWGVEEALEAALAVRLALPGGGAIAIEETAALTAIDVDAGGADRRLV
HHHHHHCCCHHHHHCCHHHHHHHHHHEEEECCCCCEEEEECCCEEEEEEECCCCCCCEEE
APVAAREIARQIRLRALAGQILIDFPRGARGPEESGLVALIEALAADPAGPRVLGVTRGG
CHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCC
LVEVVRPRRRPPLSSLLTVPGGPPKLTAETALLAALRELVAGATRAPGARPHLRVGPRSG
HHHHHCCCCCCCHHHEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCC
GLLATDLAQALAEVEAALGQAVAIDCFADHPEDRPEATFF
CCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCC
>Mature Secondary Structure 
ADPGRQTYHVLVSDGPGETRWALLAGDTPVEVVFQRAHAVETGAIVAGRVTAAVPGHQA
CCCCCCEEEEEEECCCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEECCEEEECCCCCE
LFVDLGRGPAGFLGAEDTPRGLPGEGALLAFQVLREAVAGKGPTVTAAPTLAGRLLVYTP
EEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEECHHHHCEEEEEEC
YVPGVGLSPRAGSTAARKALRARITALLDPGEGVVARTIAGEASEAALRAELDHHRARWR
CCCCCCCCCCCCCHHHHHHHHHHHHHEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHH
AIGRALAASTRPGLLEAAPGPLGGWLDSLGDALRSVVADQGERAQALRRALAARGPDWPA
HHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCH
RVVIERADQPLFERWGVEEALEAALAVRLALPGGGAIAIEETAALTAIDVDAGGADRRLV
HHHHHHCCCHHHHHCCHHHHHHHHHHEEEECCCCCEEEEECCCEEEEEEECCCCCCCEEE
APVAAREIARQIRLRALAGQILIDFPRGARGPEESGLVALIEALAADPAGPRVLGVTRGG
CHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCC
LVEVVRPRRRPPLSSLLTVPGGPPKLTAETALLAALRELVAGATRAPGARPHLRVGPRSG
HHHHHCCCCCCCHHHEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCC
GLLATDLAQALAEVEAALGQAVAIDCFADHPEDRPEATFF
CCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]