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The map label for this gene is lolC [H]

Identifier: 83594081

GI number: 83594081

Start: 3181677

End: 3182906

Strand: Reverse

Name: lolC [H]

Synonym: Rru_A2749

Alternate gene names: 83594081

Gene position: 3182906-3181677 (Counterclockwise)

Preceding gene: 83594082

Following gene: 83594080

Centisome position: 73.12

GC content: 68.29

Gene sequence:

>1230_bases
TTGTTCGCCCTCAAGGTCGCCCGCCGCTATCTGTTGTCCAATCCCGGTCAGACCCTGCTGCTGATCGCCGGCGTCGCCCT
CGGGGTGATCGTTTTCGTTTTCATCACCGGGCTGATCGGCGGCTTGCGGGTGGAATTGATCGCCCAGACCGTGGGCAATC
TTCCCCATGTGACGCTGGAGGCCAAGGCCCTGCCGCCGCGCGAGGCCCTGCCGCCGCGCGAGGCCCTGGCGTTGGGCGAG
ACGGCGAAGGTGCTGGCGGCGGTTGAAAAGACCCTGGATGTGCCCGAACAGATCCGCTCGTGGTCGCCGCTGCTGGGCAT
CGTCGAGGCGACGCCCGGGGTCAGGGTCGCCTCGCCGCAGATCATCGGCAACGCCTTCGCCACCCGGGGACGGGCGAGCG
CGGCGCTGACCCTGACCGGTGTGCTGCCCGAGCGGCTGTCGGCGATCGCCGATATCGACGGCCAATTGGTGGCGGGCGAG
GCGCGGCTTGATCTCGACAGTCTGCTGATCGGCGACAAACTGGCCGACAAGCTGGGCTTGAGGATCGGCAGCCGTCTGGT
TCTGCGCGCCGATACCGGCACGGAGCGCAGCTTTCTGATCCAGGGGATCTTCCGCACCGGGGTCGAGGCGCTGGACGAGC
GCACCGCCTATCTGCACCTGCGCGCCGCCCGCACCTTGCTTGATCTGCCCTATGGCATCAGCAAGATCGAGATCAAACTG
GCCCGCCTCGACGACGCCGAGGTCGTGGCCAGCCATCTGGGGGCGGCGACCGGGCTGACGGCGACCAGCTGGATCGCCAA
GAACCGCCGGCTGTATCAGGCCCTGGCCAGTCAGGCGCAGACCGGCCGCTTGATCCAGGGCTTCAGCCTGATCACCATCG
TCATCGGCGTCTCCTCGGCCTTGCTGCTGTCGACCTATCGCCGGCGCTCCGAGATCGGCATCATGCGCTCGTTTGGCGTC
TCCAAGCGCTTCGTGGCCCTGGTCTTCCTGGCCCAGGGGCTGTTCGTCGGACTGATCGGCGCCCTGCTCGGCGCCTCGGC
CGGCTATGGGTTCTGCCAGTTGCTGGTCAGCGTGGCCCGCCGCCCCGATGGCACGCCGGCCCTGCCGATCGATCCCTCGC
AGGGCGGCTATCTGGCGGTGATCAGCTTGACCGTGCTTGGCAGCGTGCTGGCCGCGGTGATCCCGGCGCGCAACGCCGCC
GCCATCGATCCGGTCGAGGTGATCGGATGA

Upstream 100 bases:

>100_bases
ACAGAGGGCCTGAGCGCCGGCGAGGCCGTGGCCCTGGCCCCCCTTGGCCTGACCGCCGGGATGGTGGTGGCCCCCGGCGC
GGCGGCTGGGGACTAAGGCC

Downstream 100 bases:

>100_bases
CGCTTCCTTTGGTCGAGGCGCGCAGCCTGTCCAAAAGCTTCGGCGAGGGCGAACTGGCCAGTCAGGTTCTCAAAAGGCTG
AGTTTTGATATCAATGCGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 409; Mature: 409

Protein sequence:

>409_residues
MFALKVARRYLLSNPGQTLLLIAGVALGVIVFVFITGLIGGLRVELIAQTVGNLPHVTLEAKALPPREALPPREALALGE
TAKVLAAVEKTLDVPEQIRSWSPLLGIVEATPGVRVASPQIIGNAFATRGRASAALTLTGVLPERLSAIADIDGQLVAGE
ARLDLDSLLIGDKLADKLGLRIGSRLVLRADTGTERSFLIQGIFRTGVEALDERTAYLHLRAARTLLDLPYGISKIEIKL
ARLDDAEVVASHLGAATGLTATSWIAKNRRLYQALASQAQTGRLIQGFSLITIVIGVSSALLLSTYRRRSEIGIMRSFGV
SKRFVALVFLAQGLFVGLIGALLGASAGYGFCQLLVSVARRPDGTPALPIDPSQGGYLAVISLTVLGSVLAAVIPARNAA
AIDPVEVIG

Sequences:

>Translated_409_residues
MFALKVARRYLLSNPGQTLLLIAGVALGVIVFVFITGLIGGLRVELIAQTVGNLPHVTLEAKALPPREALPPREALALGE
TAKVLAAVEKTLDVPEQIRSWSPLLGIVEATPGVRVASPQIIGNAFATRGRASAALTLTGVLPERLSAIADIDGQLVAGE
ARLDLDSLLIGDKLADKLGLRIGSRLVLRADTGTERSFLIQGIFRTGVEALDERTAYLHLRAARTLLDLPYGISKIEIKL
ARLDDAEVVASHLGAATGLTATSWIAKNRRLYQALASQAQTGRLIQGFSLITIVIGVSSALLLSTYRRRSEIGIMRSFGV
SKRFVALVFLAQGLFVGLIGALLGASAGYGFCQLLVSVARRPDGTPALPIDPSQGGYLAVISLTVLGSVLAAVIPARNAA
AIDPVEVIG
>Mature_409_residues
MFALKVARRYLLSNPGQTLLLIAGVALGVIVFVFITGLIGGLRVELIAQTVGNLPHVTLEAKALPPREALPPREALALGE
TAKVLAAVEKTLDVPEQIRSWSPLLGIVEATPGVRVASPQIIGNAFATRGRASAALTLTGVLPERLSAIADIDGQLVAGE
ARLDLDSLLIGDKLADKLGLRIGSRLVLRADTGTERSFLIQGIFRTGVEALDERTAYLHLRAARTLLDLPYGISKIEIKL
ARLDDAEVVASHLGAATGLTATSWIAKNRRLYQALASQAQTGRLIQGFSLITIVIGVSSALLLSTYRRRSEIGIMRSFGV
SKRFVALVFLAQGLFVGLIGALLGASAGYGFCQLLVSVARRPDGTPALPIDPSQGGYLAVISLTVLGSVLAAVIPARNAA
AIDPVEVIG

Specific function: Part of an ATP-dependent transport system responsible for the release of lipoproteins targeted to the outer membrane from the inner membrane. Such a release is dependent of the sorting-signal (absence of an Asp at position 2 of the mature lipoprotein) and

COG id: COG4591

COG function: function code M; ABC-type transport system, involved in lipoprotein release, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family. LolC/E subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787362, Length=421, Percent_Identity=23.7529691211401, Blast_Score=69, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838
- InterPro:   IPR011925 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 43033; Mature: 43033

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFALKVARRYLLSNPGQTLLLIAGVALGVIVFVFITGLIGGLRVELIAQTVGNLPHVTLE
CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
AKALPPREALPPREALALGETAKVLAAVEKTLDVPEQIRSWSPLLGIVEATPGVRVASPQ
ECCCCCCCCCCCHHHHHHCHHHHHHHHHHHHCCCHHHHHCCCCHHHHEECCCCCEECCCH
IIGNAFATRGRASAALTLTGVLPERLSAIADIDGQLVAGEARLDLDSLLIGDKLADKLGL
HHHHHHHCCCCCCEEEEEECCCHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHH
RIGSRLVLRADTGTERSFLIQGIFRTGVEALDERTAYLHLRAARTLLDLPYGISKIEIKL
HHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
ARLDDAEVVASHLGAATGLTATSWIAKNRRLYQALASQAQTGRLIQGFSLITIVIGVSSA
EECCCHHHHHHHHCHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
LLLSTYRRRSEIGIMRSFGVSKRFVALVFLAQGLFVGLIGALLGASAGYGFCQLLVSVAR
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
RPDGTPALPIDPSQGGYLAVISLTVLGSVLAAVIPARNAAAIDPVEVIG
CCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCHHHCC
>Mature Secondary Structure
MFALKVARRYLLSNPGQTLLLIAGVALGVIVFVFITGLIGGLRVELIAQTVGNLPHVTLE
CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
AKALPPREALPPREALALGETAKVLAAVEKTLDVPEQIRSWSPLLGIVEATPGVRVASPQ
ECCCCCCCCCCCHHHHHHCHHHHHHHHHHHHCCCHHHHHCCCCHHHHEECCCCCEECCCH
IIGNAFATRGRASAALTLTGVLPERLSAIADIDGQLVAGEARLDLDSLLIGDKLADKLGL
HHHHHHHCCCCCCEEEEEECCCHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHH
RIGSRLVLRADTGTERSFLIQGIFRTGVEALDERTAYLHLRAARTLLDLPYGISKIEIKL
HHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
ARLDDAEVVASHLGAATGLTATSWIAKNRRLYQALASQAQTGRLIQGFSLITIVIGVSSA
EECCCHHHHHHHHCHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
LLLSTYRRRSEIGIMRSFGVSKRFVALVFLAQGLFVGLIGALLGASAGYGFCQLLVSVAR
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
RPDGTPALPIDPSQGGYLAVISLTVLGSVLAAVIPARNAAAIDPVEVIG
CCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10761919 [H]