| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594060
Identifier: 83594060
GI number: 83594060
Start: 3155961
End: 3156641
Strand: Reverse
Name: 83594060
Synonym: Rru_A2728
Alternate gene names: NA
Gene position: 3156641-3155961 (Counterclockwise)
Preceding gene: 83594062
Following gene: 83594059
Centisome position: 72.52
GC content: 68.14
Gene sequence:
>681_bases ATGGGGGGTGTTTTGGACGGGTTTTGGCAACAAGGGGTGGCCCTGGCGGTTTTTCTGGGTACCCATGCGATCGCCGCCTT GCCCGGGGCGCGCGGGGCGCTGCGGCGTCGGTTGGGGGCGGGCGGCTATCTTGTCGGGTATAGCGTGGTGTCGCTGGCCT TGCTGGTCTGGTTGACCGTGGCCACCTTGGGCAGTCCGTTCGTCGCCCTGTGGCCGCCCCAGCCCTTCGCCGCCGTGCTT CTGGTCGCGGTGATGCCCGGAGCGCTGATTTTACTGGTCGCCGCCTTGACCGAGGCCAATCCCTTTTCCCTGGGCTTCAG CGGTCGGACCTTCGATCCGCAGCGTCCCCATACCTGCGGTCGGGTCGCCCATCCGCTGTTCGTGGCCTTCGGCCTGTGGG CGGGACTGCATTTGCTGGCCAATGGCGATGTGGCGGCGGCGCTGTATTTCGGTCCGCTGCTGCTCCTGGCCTTGGCCGGA CCGGCGGTGGCTTCGGCCAAGGCCAAGGCGCGCTATGGCGCGGTCCAGCTTGATCTGTGGCGCCGCGCCGCCCGTGCCGC GCCGCCCACCACCCGCTTGCCCGCCCTGCGAACCTGGATCGGCGGCCTGCTTTTGTATGGGGCGATCCTCTTCCTTCACG GTCCGCTGATCGGGCTTGATCCGCGTGACATGCTCCCTTGA
Upstream 100 bases:
>100_bases GGGAGACGGGCGGGGGAGTAGAGTATGGGGCCGCCGGAGCCGGGGCGCAATGCACCCAAAAGGCGGCTAAGGTCGAAAAA GGCCTTAGGGATAACAAGGG
Downstream 100 bases:
>100_bases GCTAGGTATCGGCGATCAAAACATAGTAGAATGCTCTGATAATCACCCGGAAGCGATGTCCTTCCGGGGATGGAACAGGA TGGGACCGGCTTGGCCCGGT
Product: NnrU
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 226; Mature: 225
Protein sequence:
>226_residues MGGVLDGFWQQGVALAVFLGTHAIAALPGARGALRRRLGAGGYLVGYSVVSLALLVWLTVATLGSPFVALWPPQPFAAVL LVAVMPGALILLVAALTEANPFSLGFSGRTFDPQRPHTCGRVAHPLFVAFGLWAGLHLLANGDVAAALYFGPLLLLALAG PAVASAKAKARYGAVQLDLWRRAARAAPPTTRLPALRTWIGGLLLYGAILFLHGPLIGLDPRDMLP
Sequences:
>Translated_226_residues MGGVLDGFWQQGVALAVFLGTHAIAALPGARGALRRRLGAGGYLVGYSVVSLALLVWLTVATLGSPFVALWPPQPFAAVL LVAVMPGALILLVAALTEANPFSLGFSGRTFDPQRPHTCGRVAHPLFVAFGLWAGLHLLANGDVAAALYFGPLLLLALAG PAVASAKAKARYGAVQLDLWRRAARAAPPTTRLPALRTWIGGLLLYGAILFLHGPLIGLDPRDMLP >Mature_225_residues GGVLDGFWQQGVALAVFLGTHAIAALPGARGALRRRLGAGGYLVGYSVVSLALLVWLTVATLGSPFVALWPPQPFAAVLL VAVMPGALILLVAALTEANPFSLGFSGRTFDPQRPHTCGRVAHPLFVAFGLWAGLHLLANGDVAAALYFGPLLLLALAGP AVASAKAKARYGAVQLDLWRRAARAAPPTTRLPALRTWIGGLLLYGAILFLHGPLIGLDPRDMLP
Specific function: Unknown
COG id: COG4094
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23593; Mature: 23462
Theoretical pI: Translated: 11.29; Mature: 11.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGVLDGFWQQGVALAVFLGTHAIAALPGARGALRRRLGAGGYLVGYSVVSLALLVWLTV CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH ATLGSPFVALWPPQPFAAVLLVAVMPGALILLVAALTEANPFSLGFSGRTFDPQRPHTCG HHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCHH RVAHPLFVAFGLWAGLHLLANGDVAAALYFGPLLLLALAGPAVASAKAKARYGAVQLDLW HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHH RRAARAAPPTTRLPALRTWIGGLLLYGAILFLHGPLIGLDPRDMLP HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCC >Mature Secondary Structure GGVLDGFWQQGVALAVFLGTHAIAALPGARGALRRRLGAGGYLVGYSVVSLALLVWLTV CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH ATLGSPFVALWPPQPFAAVLLVAVMPGALILLVAALTEANPFSLGFSGRTFDPQRPHTCG HHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCHH RVAHPLFVAFGLWAGLHLLANGDVAAALYFGPLLLLALAGPAVASAKAKARYGAVQLDLW HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHH RRAARAAPPTTRLPALRTWIGGLLLYGAILFLHGPLIGLDPRDMLP HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA