Definition Rhodospirillum rubrum ATCC 11170 chromosome, complete genome.
Accession NC_007643
Length 4,352,825

Click here to switch to the map view.

The map label for this gene is 83594060

Identifier: 83594060

GI number: 83594060

Start: 3155961

End: 3156641

Strand: Reverse

Name: 83594060

Synonym: Rru_A2728

Alternate gene names: NA

Gene position: 3156641-3155961 (Counterclockwise)

Preceding gene: 83594062

Following gene: 83594059

Centisome position: 72.52

GC content: 68.14

Gene sequence:

>681_bases
ATGGGGGGTGTTTTGGACGGGTTTTGGCAACAAGGGGTGGCCCTGGCGGTTTTTCTGGGTACCCATGCGATCGCCGCCTT
GCCCGGGGCGCGCGGGGCGCTGCGGCGTCGGTTGGGGGCGGGCGGCTATCTTGTCGGGTATAGCGTGGTGTCGCTGGCCT
TGCTGGTCTGGTTGACCGTGGCCACCTTGGGCAGTCCGTTCGTCGCCCTGTGGCCGCCCCAGCCCTTCGCCGCCGTGCTT
CTGGTCGCGGTGATGCCCGGAGCGCTGATTTTACTGGTCGCCGCCTTGACCGAGGCCAATCCCTTTTCCCTGGGCTTCAG
CGGTCGGACCTTCGATCCGCAGCGTCCCCATACCTGCGGTCGGGTCGCCCATCCGCTGTTCGTGGCCTTCGGCCTGTGGG
CGGGACTGCATTTGCTGGCCAATGGCGATGTGGCGGCGGCGCTGTATTTCGGTCCGCTGCTGCTCCTGGCCTTGGCCGGA
CCGGCGGTGGCTTCGGCCAAGGCCAAGGCGCGCTATGGCGCGGTCCAGCTTGATCTGTGGCGCCGCGCCGCCCGTGCCGC
GCCGCCCACCACCCGCTTGCCCGCCCTGCGAACCTGGATCGGCGGCCTGCTTTTGTATGGGGCGATCCTCTTCCTTCACG
GTCCGCTGATCGGGCTTGATCCGCGTGACATGCTCCCTTGA

Upstream 100 bases:

>100_bases
GGGAGACGGGCGGGGGAGTAGAGTATGGGGCCGCCGGAGCCGGGGCGCAATGCACCCAAAAGGCGGCTAAGGTCGAAAAA
GGCCTTAGGGATAACAAGGG

Downstream 100 bases:

>100_bases
GCTAGGTATCGGCGATCAAAACATAGTAGAATGCTCTGATAATCACCCGGAAGCGATGTCCTTCCGGGGATGGAACAGGA
TGGGACCGGCTTGGCCCGGT

Product: NnrU

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MGGVLDGFWQQGVALAVFLGTHAIAALPGARGALRRRLGAGGYLVGYSVVSLALLVWLTVATLGSPFVALWPPQPFAAVL
LVAVMPGALILLVAALTEANPFSLGFSGRTFDPQRPHTCGRVAHPLFVAFGLWAGLHLLANGDVAAALYFGPLLLLALAG
PAVASAKAKARYGAVQLDLWRRAARAAPPTTRLPALRTWIGGLLLYGAILFLHGPLIGLDPRDMLP

Sequences:

>Translated_226_residues
MGGVLDGFWQQGVALAVFLGTHAIAALPGARGALRRRLGAGGYLVGYSVVSLALLVWLTVATLGSPFVALWPPQPFAAVL
LVAVMPGALILLVAALTEANPFSLGFSGRTFDPQRPHTCGRVAHPLFVAFGLWAGLHLLANGDVAAALYFGPLLLLALAG
PAVASAKAKARYGAVQLDLWRRAARAAPPTTRLPALRTWIGGLLLYGAILFLHGPLIGLDPRDMLP
>Mature_225_residues
GGVLDGFWQQGVALAVFLGTHAIAALPGARGALRRRLGAGGYLVGYSVVSLALLVWLTVATLGSPFVALWPPQPFAAVLL
VAVMPGALILLVAALTEANPFSLGFSGRTFDPQRPHTCGRVAHPLFVAFGLWAGLHLLANGDVAAALYFGPLLLLALAGP
AVASAKAKARYGAVQLDLWRRAARAAPPTTRLPALRTWIGGLLLYGAILFLHGPLIGLDPRDMLP

Specific function: Unknown

COG id: COG4094

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23593; Mature: 23462

Theoretical pI: Translated: 11.29; Mature: 11.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGVLDGFWQQGVALAVFLGTHAIAALPGARGALRRRLGAGGYLVGYSVVSLALLVWLTV
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
ATLGSPFVALWPPQPFAAVLLVAVMPGALILLVAALTEANPFSLGFSGRTFDPQRPHTCG
HHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCHH
RVAHPLFVAFGLWAGLHLLANGDVAAALYFGPLLLLALAGPAVASAKAKARYGAVQLDLW
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHH
RRAARAAPPTTRLPALRTWIGGLLLYGAILFLHGPLIGLDPRDMLP
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCC
>Mature Secondary Structure 
GGVLDGFWQQGVALAVFLGTHAIAALPGARGALRRRLGAGGYLVGYSVVSLALLVWLTV
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
ATLGSPFVALWPPQPFAAVLLVAVMPGALILLVAALTEANPFSLGFSGRTFDPQRPHTCG
HHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCHH
RVAHPLFVAFGLWAGLHLLANGDVAAALYFGPLLLLALAGPAVASAKAKARYGAVQLDLW
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHH
RRAARAAPPTTRLPALRTWIGGLLLYGAILFLHGPLIGLDPRDMLP
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA