| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594055
Identifier: 83594055
GI number: 83594055
Start: 3149133
End: 3149636
Strand: Direct
Name: 83594055
Synonym: Rru_A2723
Alternate gene names: NA
Gene position: 3149133-3149636 (Clockwise)
Preceding gene: 83594054
Following gene: 83594056
Centisome position: 72.35
GC content: 61.9
Gene sequence:
>504_bases ATGAAATCCGTTGAAGATTTTCTGGCCCATGCCGTGGCGCTGGAAGAAGACTCGGCCCTGCGCTTCGACGAACTGGCCGA TGCCCTTGATGTCCACAACAATGCCGAGGTCACCGAGATCTTCCGCAAGATGGCCCATTATTCCCGGCTGCATCTGCGCG AAGCCCGCGATCTGGCCGAGGGGCGGACCCTGCCCCATATCCGCCCCTGGGAATTCGAATGGCCCGACGCCGAGGCCCCG GAAACCCCGATGGTCGACGGCACCCATTACCTGATGACGCCCCACCACGCCCTCAAGCTGGCGCTCGACAGCGAAATCCG TGGCCGCGATTTTTATCAGGGCGTCGCCGATAAGACCGAAAACCCCCGAATCCGCGATCTCGCCTTGGAATTCGCCGGCG AGGAAAGCGAGCATGTCGCCCTGCTTGACGAGATGCTGACGCGCTATCCCCGCCCCGAAGCCGATTGGGACGAGGACATG GATCCCCCGGTGGTTGTCGATTAA
Upstream 100 bases:
>100_bases CGGTGAGGGGAAGATCCCTCATCGCGGAGACTTTGATCTGGCATCCCTGTTTTGGAGCGGCGTAGTGTTCGAGCGACAGT CTTTGTGGGGGGATGGACTT
Downstream 100 bases:
>100_bases CCACTCTGTCGCGCCTTCCGGGACGCAAACGGCCATGCTATCTGAAGGGACCGCCCCTTGGCTTCCCGGAGGATCTCCAG CATGTCCGTTTCCGTCGCCC
Product: rubrerythrin
Products: NA
Alternate protein names: Ferredoxin; Rubrerythrin Subfamily Protein; Ferritin-Like Protein
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MKSVEDFLAHAVALEEDSALRFDELADALDVHNNAEVTEIFRKMAHYSRLHLREARDLAEGRTLPHIRPWEFEWPDAEAP ETPMVDGTHYLMTPHHALKLALDSEIRGRDFYQGVADKTENPRIRDLALEFAGEESEHVALLDEMLTRYPRPEADWDEDM DPPVVVD
Sequences:
>Translated_167_residues MKSVEDFLAHAVALEEDSALRFDELADALDVHNNAEVTEIFRKMAHYSRLHLREARDLAEGRTLPHIRPWEFEWPDAEAP ETPMVDGTHYLMTPHHALKLALDSEIRGRDFYQGVADKTENPRIRDLALEFAGEESEHVALLDEMLTRYPRPEADWDEDM DPPVVVD >Mature_167_residues MKSVEDFLAHAVALEEDSALRFDELADALDVHNNAEVTEIFRKMAHYSRLHLREARDLAEGRTLPHIRPWEFEWPDAEAP ETPMVDGTHYLMTPHHALKLALDSEIRGRDFYQGVADKTENPRIRDLALEFAGEESEHVALLDEMLTRYPRPEADWDEDM DPPVVVD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19259; Mature: 19259
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSVEDFLAHAVALEEDSALRFDELADALDVHNNAEVTEIFRKMAHYSRLHLREARDLAE CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC GRTLPHIRPWEFEWPDAEAPETPMVDGTHYLMTPHHALKLALDSEIRGRDFYQGVADKTE CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHCCCCCCHHHHHHHHCCCC NPRIRDLALEFAGEESEHVALLDEMLTRYPRPEADWDEDMDPPVVVD CCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEECC >Mature Secondary Structure MKSVEDFLAHAVALEEDSALRFDELADALDVHNNAEVTEIFRKMAHYSRLHLREARDLAE CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC GRTLPHIRPWEFEWPDAEAPETPMVDGTHYLMTPHHALKLALDSEIRGRDFYQGVADKTE CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHCCCCCCHHHHHHHHCCCC NPRIRDLALEFAGEESEHVALLDEMLTRYPRPEADWDEDMDPPVVVD CCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA