Definition Rhodospirillum rubrum ATCC 11170 chromosome, complete genome.
Accession NC_007643
Length 4,352,825

Click here to switch to the map view.

The map label for this gene is secE [C]

Identifier: 83594033

GI number: 83594033

Start: 3124836

End: 3125033

Strand: Reverse

Name: secE [C]

Synonym: Rru_A2701

Alternate gene names: 83594033

Gene position: 3125033-3124836 (Counterclockwise)

Preceding gene: 83594034

Following gene: 83594032

Centisome position: 71.79

GC content: 58.08

Gene sequence:

>198_bases
ATGCCGAGGACCAACCCAGGTCAATTCGTCCGCCAGGTCCGCCAGGAAATCGGCAAGGTGACCTGGCCGTCGCGCAAGGA
AACCGTCATCTCGACGGTCATGGTTTTCATCATGGCCTCGCTGGCGGCTGTGTTTTTCCTGTTGGTCGACTGGATCCTGG
CCGAGGGCGTTCAGTTCATCTTTGGTTTGGGAGGTTGA

Upstream 100 bases:

>100_bases
CTCCGTCCGGTGCCGTCCTTCGGCGCCACGGCTTGCCAAGGGCAGGCCCTTTTCGGAACAATCGCCGATCCGGCGAAGTC
CCGCAGTTTGGAAGGTCAGG

Downstream 100 bases:

>100_bases
GCGCGTGACCGCCCGCTGGTACGTCATCCATGTCTATTCCGGTTTTGAAAACAAGGTCGCCCAGTCCATTCGGGAACAGG
CGATCCAGAAAGGCATGGAC

Product: preprotein translocase subunit SecE

Products: NA

Alternate protein names: Preprotein Translocase Subunit SecE; Protein Translocase Subunit SecE; Translocation Complex Protein

Number of amino acids: Translated: 65; Mature: 64

Protein sequence:

>65_residues
MPRTNPGQFVRQVRQEIGKVTWPSRKETVISTVMVFIMASLAAVFFLLVDWILAEGVQFIFGLGG

Sequences:

>Translated_65_residues
MPRTNPGQFVRQVRQEIGKVTWPSRKETVISTVMVFIMASLAAVFFLLVDWILAEGVQFIFGLGG
>Mature_64_residues
PRTNPGQFVRQVRQEIGKVTWPSRKETVISTVMVFIMASLAAVFFLLVDWILAEGVQFIFGLGG

Specific function: Essential For Protein Export. [C]

COG id: COG0690

COG function: function code U; Preprotein translocase subunit SecE

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7285; Mature: 7154

Theoretical pI: Translated: 10.74; Mature: 10.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRTNPGQFVRQVRQEIGKVTWPSRKETVISTVMVFIMASLAAVFFLLVDWILAEGVQFI
CCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGLGG
HHCCC
>Mature Secondary Structure 
PRTNPGQFVRQVRQEIGKVTWPSRKETVISTVMVFIMASLAAVFFLLVDWILAEGVQFI
CCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGLGG
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA