| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83593913
Identifier: 83593913
GI number: 83593913
Start: 3002510
End: 3004486
Strand: Reverse
Name: 83593913
Synonym: Rru_A2581
Alternate gene names: NA
Gene position: 3004486-3002510 (Counterclockwise)
Preceding gene: 83593914
Following gene: 83593912
Centisome position: 69.02
GC content: 71.67
Gene sequence:
>1977_bases ATGGCGCCGCGCCTGTATTTCGCCTGGGTCGCCGCCGACGAGGGCTTCGATCCCCTGGTCCATGCCCGCGCCGACGAGGC GATCTTGGCTTTGGAAATCCGCGCCGTTGAAGGCGAGGCGCCGCGCGCCCGGGTCAGCGTGGCGCGCGGTCGGCGGCGGC TGGGCGGACCGCAAGGCCAGCGCCATGCGGTGATGTCCGCCAGACTGGACGGCGGTGCCGTCGTCGGGCTGTTCCGCGGC GTTTTGGCCGAGGTGCCCGATGGTGCCGCCGGAGCGTTTTTGACCCTGTTGTTCGACGCGCGGACCGGCGACGCCACCGC CCGCATCGCCGCCGCCCTCGCCCCTTACAAACGCGCCCCGGGCTATGACGCCCTGTTCATCAATGAGGGCCGCGAGGACG AACCCGAGGAGATCCTCGATGGCTGGTTCGCCCGGCTGATCGTTGACCGCCTTGATGGCGCGGTCGGCGTTTCCCACGGC CTATGGGGCGGCAAAAGCCTGAGCTTCGGCCCGGGCGACATCGCCGAGGGCTCGCTTGACCTGCGCCGGCCCCAGCGGTC GCCGCCGGCCTGGGTGGAGGGGGTGGTCGATGCGCGCTGGCTGCAGCGCGGCGGCGGCACGGTCGATCTCGGCGCCCTGA TCGCCCGCGAGGCCGGCGGTCCTTTGGTCACCTTGTCGCGGCCCGAGGATTTCGCCGATGGCTGGCCCAAGCCCGGCGCC GGCCTGGGCGGGGCCAGCGGCTATAAGGCGGTGACCTCGGCCCTGGTGGCCTGTGAGTTGCCGGCGATGGAAGACTCGCT CGGCGACGAGGAGCGCGTGCTGCTGTCCGATGAGGGCACCACCGTGGTGGTCGGGGCGGGGACCGGACTGGCCGGGGGGC AGGGCGTGGGCTTCGGCCCAACGGCGGCACGCTCGAGCCTGTTTCCGATGGGCGCGGGCGCGGGCTGGATCTGCTTTGCC AAGCGCGCCTATTGGCCGGTGCTGACGGCGCGCTGGGAGATCCGCCAAAGCCGTCGGCAAAGCCTGAGCTGTCGGCTGGA AAGCCATCTGGCGGTTGACTGGCCGGGCGCTGGCGAGGGCGAGCGCCTGAGCTTTGGCCTGCGCGATGTCGGCGCCGAAA CGCAGGTGCCGGCCGCCGACCCCGCGCCTTGCGATTGCGCGAGCCTGCTCGCCCTGTCGCGGCCCAAGGGTGGCGGCCCA AGCGCCGAGATCCCGCCGACCGGCTTGTCGGCGGGCGGGGCGGAAACGGCCATCGGCGATCCGCTCCATGCCAGCTTTTT CCATACGCCGCGCGGCCGGCGGGCGGTCGCCCATATGCTGCGGGTGATGGCGGTGCGGCTGGCCTTCGCCCAACGCTGCG TCAGCTTGCGCGCCCGCTTGCCTGGCTGGTCGGCGCGCGCGCTGGCCATCGATCTCGATACGACGCTGAGCCTGGTCGCG GCGACGCTGCCCGGCGGCCGGGCGAGTGGCAAGGTGGTTGACTACCGGTTTGTTTGGCAGGGGCGCGGCTGCTGGGTCGA GGTCGAGATCGCCTGTTCGGTCGGTGGCGGCGGGTCGATGGCCCCCGCCGATCCGGGGCGGGCGACCTATGCCGAGGATT ACGCCGAAGATTTCACGCTGACCACCGGAGGGGTGGTGCGCGGCGACGAGGGGGATGGCCTGGACGTGGCGATTTTCGAT TACGCCGCCGACCAGCCGACCGACCGTCTGGCCGGGGCTTTCGCCTGGGGGGCGGCCGATCTGGTCAGCGGCCTGTGCCT GCGCAATCTGGCTGGCGAGCAGGACGCCTATCTGTGGACCCATCGCCAGGGGGCGATCAGCCCCAAGCGCCTGCTGTTTG ACGTTCCCACCGATGTCTGTCTGGCCCTGCGGCCGCTGGCCGCCGACGATCAGATTCACCAGACGATCACCGTGCAGGCC GCCGGGCGCTTCGGCTTGCCGCCGACCATCGATCTGCGGGACGGCGGTCATGGGTAA
Upstream 100 bases:
>100_bases CCGCCCGATCCTGACGATGATGGTGCGCGACTGGTCGCTGGGCCTGCTGGAATGGGAGGGGCGCCACCCCTGGCGCCTGT TGCTCGAGGAGGTTTGAACG
Downstream 100 bases:
>100_bases GCCCCTGTGCCTTGATCCCTTTTCGATCCTGCGCGACATGTCCTTCGGCCGGCCACCCGGGCTGCTGGTCTTTCGCCACC GGGTTTTGGAAGGCGGGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 658; Mature: 657
Protein sequence:
>658_residues MAPRLYFAWVAADEGFDPLVHARADEAILALEIRAVEGEAPRARVSVARGRRRLGGPQGQRHAVMSARLDGGAVVGLFRG VLAEVPDGAAGAFLTLLFDARTGDATARIAAALAPYKRAPGYDALFINEGREDEPEEILDGWFARLIVDRLDGAVGVSHG LWGGKSLSFGPGDIAEGSLDLRRPQRSPPAWVEGVVDARWLQRGGGTVDLGALIAREAGGPLVTLSRPEDFADGWPKPGA GLGGASGYKAVTSALVACELPAMEDSLGDEERVLLSDEGTTVVVGAGTGLAGGQGVGFGPTAARSSLFPMGAGAGWICFA KRAYWPVLTARWEIRQSRRQSLSCRLESHLAVDWPGAGEGERLSFGLRDVGAETQVPAADPAPCDCASLLALSRPKGGGP SAEIPPTGLSAGGAETAIGDPLHASFFHTPRGRRAVAHMLRVMAVRLAFAQRCVSLRARLPGWSARALAIDLDTTLSLVA ATLPGGRASGKVVDYRFVWQGRGCWVEVEIACSVGGGGSMAPADPGRATYAEDYAEDFTLTTGGVVRGDEGDGLDVAIFD YAADQPTDRLAGAFAWGAADLVSGLCLRNLAGEQDAYLWTHRQGAISPKRLLFDVPTDVCLALRPLAADDQIHQTITVQA AGRFGLPPTIDLRDGGHG
Sequences:
>Translated_658_residues MAPRLYFAWVAADEGFDPLVHARADEAILALEIRAVEGEAPRARVSVARGRRRLGGPQGQRHAVMSARLDGGAVVGLFRG VLAEVPDGAAGAFLTLLFDARTGDATARIAAALAPYKRAPGYDALFINEGREDEPEEILDGWFARLIVDRLDGAVGVSHG LWGGKSLSFGPGDIAEGSLDLRRPQRSPPAWVEGVVDARWLQRGGGTVDLGALIAREAGGPLVTLSRPEDFADGWPKPGA GLGGASGYKAVTSALVACELPAMEDSLGDEERVLLSDEGTTVVVGAGTGLAGGQGVGFGPTAARSSLFPMGAGAGWICFA KRAYWPVLTARWEIRQSRRQSLSCRLESHLAVDWPGAGEGERLSFGLRDVGAETQVPAADPAPCDCASLLALSRPKGGGP SAEIPPTGLSAGGAETAIGDPLHASFFHTPRGRRAVAHMLRVMAVRLAFAQRCVSLRARLPGWSARALAIDLDTTLSLVA ATLPGGRASGKVVDYRFVWQGRGCWVEVEIACSVGGGGSMAPADPGRATYAEDYAEDFTLTTGGVVRGDEGDGLDVAIFD YAADQPTDRLAGAFAWGAADLVSGLCLRNLAGEQDAYLWTHRQGAISPKRLLFDVPTDVCLALRPLAADDQIHQTITVQA AGRFGLPPTIDLRDGGHG >Mature_657_residues APRLYFAWVAADEGFDPLVHARADEAILALEIRAVEGEAPRARVSVARGRRRLGGPQGQRHAVMSARLDGGAVVGLFRGV LAEVPDGAAGAFLTLLFDARTGDATARIAAALAPYKRAPGYDALFINEGREDEPEEILDGWFARLIVDRLDGAVGVSHGL WGGKSLSFGPGDIAEGSLDLRRPQRSPPAWVEGVVDARWLQRGGGTVDLGALIAREAGGPLVTLSRPEDFADGWPKPGAG LGGASGYKAVTSALVACELPAMEDSLGDEERVLLSDEGTTVVVGAGTGLAGGQGVGFGPTAARSSLFPMGAGAGWICFAK RAYWPVLTARWEIRQSRRQSLSCRLESHLAVDWPGAGEGERLSFGLRDVGAETQVPAADPAPCDCASLLALSRPKGGGPS AEIPPTGLSAGGAETAIGDPLHASFFHTPRGRRAVAHMLRVMAVRLAFAQRCVSLRARLPGWSARALAIDLDTTLSLVAA TLPGGRASGKVVDYRFVWQGRGCWVEVEIACSVGGGGSMAPADPGRATYAEDYAEDFTLTTGGVVRGDEGDGLDVAIFDY AADQPTDRLAGAFAWGAADLVSGLCLRNLAGEQDAYLWTHRQGAISPKRLLFDVPTDVCLALRPLAADDQIHQTITVQAA GRFGLPPTIDLRDGGHG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68884; Mature: 68753
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPRLYFAWVAADEGFDPLVHARADEAILALEIRAVEGEAPRARVSVARGRRRLGGPQGQ CCCCEEEEEEECCCCCCCHHHCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCC RHAVMSARLDGGAVVGLFRGVLAEVPDGAAGAFLTLLFDARTGDATARIAAALAPYKRAP CEEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHHHCCHHCCC GYDALFINEGREDEPEEILDGWFARLIVDRLDGAVGVSHGLWGGKSLSFGPGDIAEGSLD CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC LRRPQRSPPAWVEGVVDARWLQRGGGTVDLGALIAREAGGPLVTLSRPEDFADGWPKPGA CCCCCCCCCHHHHHHHHHHHHHCCCCEEEHHHHHHHCCCCCEEEECCCCHHHCCCCCCCC GLGGASGYKAVTSALVACELPAMEDSLGDEERVLLSDEGTTVVVGAGTGLAGGQGVGFGP CCCCCCCHHHHHHHHHHHCCCCHHCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCC TAARSSLFPMGAGAGWICFAKRAYWPVLTARWEIRQSRRQSLSCRLESHLAVDWPGAGEG HHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHEEEECCEEEECCCCCCC ERLSFGLRDVGAETQVPAADPAPCDCASLLALSRPKGGGPSAEIPPTGLSAGGAETAIGD CEEEECHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC PLHASFFHTPRGRRAVAHMLRVMAVRLAFAQRCVSLRARLPGWSARALAIDLDTTLSLVA CCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHH ATLPGGRASGKVVDYRFVWQGRGCWVEVEIACSVGGGGSMAPADPGRATYAEDYAEDFTL HHCCCCCCCCCEEEEEEEEECCCEEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHCCEEE TTGGVVRGDEGDGLDVAIFDYAADQPTDRLAGAFAWGAADLVSGLCLRNLAGEQDAYLWT ECCCEEECCCCCCEEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEE HRQGAISPKRLLFDVPTDVCLALRPLAADDQIHQTITVQAAGRFGLPPTIDLRDGGHG CCCCCCCHHHEEEECCHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCEEECCCCCCC >Mature Secondary Structure APRLYFAWVAADEGFDPLVHARADEAILALEIRAVEGEAPRARVSVARGRRRLGGPQGQ CCCEEEEEEECCCCCCCHHHCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCC RHAVMSARLDGGAVVGLFRGVLAEVPDGAAGAFLTLLFDARTGDATARIAAALAPYKRAP CEEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHHHCCHHCCC GYDALFINEGREDEPEEILDGWFARLIVDRLDGAVGVSHGLWGGKSLSFGPGDIAEGSLD CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC LRRPQRSPPAWVEGVVDARWLQRGGGTVDLGALIAREAGGPLVTLSRPEDFADGWPKPGA CCCCCCCCCHHHHHHHHHHHHHCCCCEEEHHHHHHHCCCCCEEEECCCCHHHCCCCCCCC GLGGASGYKAVTSALVACELPAMEDSLGDEERVLLSDEGTTVVVGAGTGLAGGQGVGFGP CCCCCCCHHHHHHHHHHHCCCCHHCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCC TAARSSLFPMGAGAGWICFAKRAYWPVLTARWEIRQSRRQSLSCRLESHLAVDWPGAGEG HHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHEEEECCEEEECCCCCCC ERLSFGLRDVGAETQVPAADPAPCDCASLLALSRPKGGGPSAEIPPTGLSAGGAETAIGD CEEEECHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC PLHASFFHTPRGRRAVAHMLRVMAVRLAFAQRCVSLRARLPGWSARALAIDLDTTLSLVA CCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHH ATLPGGRASGKVVDYRFVWQGRGCWVEVEIACSVGGGGSMAPADPGRATYAEDYAEDFTL HHCCCCCCCCCEEEEEEEEECCCEEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHCCEEE TTGGVVRGDEGDGLDVAIFDYAADQPTDRLAGAFAWGAADLVSGLCLRNLAGEQDAYLWT ECCCEEECCCCCCEEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEE HRQGAISPKRLLFDVPTDVCLALRPLAADDQIHQTITVQAAGRFGLPPTIDLRDGGHG CCCCCCCHHHEEEECCHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA