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The map label for this gene is yrbD [C]

Identifier: 83593774

GI number: 83593774

Start: 2836448

End: 2837263

Strand: Reverse

Name: yrbD [C]

Synonym: Rru_A2439

Alternate gene names: 83593774

Gene position: 2837263-2836448 (Counterclockwise)

Preceding gene: 83593775

Following gene: 83593773

Centisome position: 65.18

GC content: 66.3

Gene sequence:

>816_bases
ATGGCTGAGAGCCCCCGCAGGGAAACTCTGATCGGCGGCGCGGTGGTCTTGCTGGGCGTGGCGTTGCTGGCGGCGACATC
GATCAATCGCCACGACGCTTCGGGACAGGCTGGAGCCTATCAGGTCGAAGCGGTGTTCAACCGAACCGATGGCATCGGCA
TCGGCAGTCCCGTTCGCTTGGCCGGCATTCCGATCGGCCGCATCGTCGGCCACAAGCTTGATCCCGAGTACCGGGCGATC
GTGACCATGCGCCTGGATCTGCCCAACGAATTGCCCGACGACACCGCCGCCAAAATTCAAACCGATGGCCTGCTCGGCTC
GAAATATATCGAACTGGTCTCGCTGGGCGGCGGCTATGGGACGATCGCCCCGGGCGGACGGCTTGATTACAGCCAGGATT
CGGTGATCGTCGAGGACCTGCTGGTCAAGATCGTCGCCATGGCCAAGATCAAGCGCGGCCTTGATCCCGATATTCCGGCC
GCCGAGCAGCAAAAAGCCAAGGCCGCCAGCCACCCTCAGGCGCCGCCGCCCGGCGGTGCCGGTGATCCCGGCGACCCCTT
CGGCGGTGGGGCGGTCGCCCCGCCCGAGGTCAATCCCTTCGCGCCCGGGCCCTTTGAGGACGATCCGCCACCGCCCGAAC
CCGGGGTGTTCTCCCCCGATCCGGGTCGGGATGGCGTTTCCGAGCCGCCGCCGGCCCAGGATACGCGCCACGATATGCGC
ACGAATACGCTAAACGATACGGCGGGAACGGCGCCCGGCGCCGTGACCTTGGCCTCTTTGCCCGCCGTGCAAGCCGATGT
GGAAGAAGGACGATAG

Upstream 100 bases:

>100_bases
TGAACGCGCCGGCGGCCGGCGCGCGGCGGCGACGGGCGATTATCAGCCCTGGCGCCCGTGAACACCCCGGTTTCTAGGCC
GATGACGATAAGGACGACGA

Downstream 100 bases:

>100_bases
GATGCGTAACCCGATCGAAACGATCATGGGCGCGGTGGTTCTGGTCGTTGCCGCCTTTTTCCTGGTTTTTGCCTATAACA
CCGCCGATCTCAAGGCGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: Mammalian Cell Entry Related Domain Protein; Luene Transport System Ttg2C Protein; Mce Related Family; Mammalian Cell Entry Related Domain-Containing Protein; Signal Peptide Protein; Mce-Related Protein; Virulence Protein Transporter

Number of amino acids: Translated: 271; Mature: 270

Protein sequence:

>271_residues
MAESPRRETLIGGAVVLLGVALLAATSINRHDASGQAGAYQVEAVFNRTDGIGIGSPVRLAGIPIGRIVGHKLDPEYRAI
VTMRLDLPNELPDDTAAKIQTDGLLGSKYIELVSLGGGYGTIAPGGRLDYSQDSVIVEDLLVKIVAMAKIKRGLDPDIPA
AEQQKAKAASHPQAPPPGGAGDPGDPFGGGAVAPPEVNPFAPGPFEDDPPPPEPGVFSPDPGRDGVSEPPPAQDTRHDMR
TNTLNDTAGTAPGAVTLASLPAVQADVEEGR

Sequences:

>Translated_271_residues
MAESPRRETLIGGAVVLLGVALLAATSINRHDASGQAGAYQVEAVFNRTDGIGIGSPVRLAGIPIGRIVGHKLDPEYRAI
VTMRLDLPNELPDDTAAKIQTDGLLGSKYIELVSLGGGYGTIAPGGRLDYSQDSVIVEDLLVKIVAMAKIKRGLDPDIPA
AEQQKAKAASHPQAPPPGGAGDPGDPFGGGAVAPPEVNPFAPGPFEDDPPPPEPGVFSPDPGRDGVSEPPPAQDTRHDMR
TNTLNDTAGTAPGAVTLASLPAVQADVEEGR
>Mature_270_residues
AESPRRETLIGGAVVLLGVALLAATSINRHDASGQAGAYQVEAVFNRTDGIGIGSPVRLAGIPIGRIVGHKLDPEYRAIV
TMRLDLPNELPDDTAAKIQTDGLLGSKYIELVSLGGGYGTIAPGGRLDYSQDSVIVEDLLVKIVAMAKIKRGLDPDIPAA
EQQKAKAASHPQAPPPGGAGDPGDPFGGGAVAPPEVNPFAPGPFEDDPPPPEPGVFSPDPGRDGVSEPPPAQDTRHDMRT
NTLNDTAGTAPGAVTLASLPAVQADVEEGR

Specific function: Unknown

COG id: COG1463

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27842; Mature: 27710

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: PS00879 ODR_DC_2_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAESPRRETLIGGAVVLLGVALLAATSINRHDASGQAGAYQVEAVFNRTDGIGIGSPVRL
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEE
AGIPIGRIVGHKLDPEYRAIVTMRLDLPNELPDDTAAKIQTDGLLGSKYIELVSLGGGYG
ECCCHHHHHCCCCCCCEEEEEEEEECCCCCCCCCHHHHEECCCCCCHHHEEHEECCCCCC
TIAPGGRLDYSQDSVIVEDLLVKIVAMAKIKRGLDPDIPAAEQQKAKAASHPQAPPPGGA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCC
GDPGDPFGGGAVAPPEVNPFAPGPFEDDPPPPEPGVFSPDPGRDGVSEPPPAQDTRHDMR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
TNTLNDTAGTAPGAVTLASLPAVQADVEEGR
CCCCCCCCCCCCCEEEHHHCCHHHHHHHCCC
>Mature Secondary Structure 
AESPRRETLIGGAVVLLGVALLAATSINRHDASGQAGAYQVEAVFNRTDGIGIGSPVRL
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEE
AGIPIGRIVGHKLDPEYRAIVTMRLDLPNELPDDTAAKIQTDGLLGSKYIELVSLGGGYG
ECCCHHHHHCCCCCCCEEEEEEEEECCCCCCCCCHHHHEECCCCCCHHHEEHEECCCCCC
TIAPGGRLDYSQDSVIVEDLLVKIVAMAKIKRGLDPDIPAAEQQKAKAASHPQAPPPGGA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCC
GDPGDPFGGGAVAPPEVNPFAPGPFEDDPPPPEPGVFSPDPGRDGVSEPPPAQDTRHDMR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
TNTLNDTAGTAPGAVTLASLPAVQADVEEGR
CCCCCCCCCCCCCEEEHHHCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA