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The map label for this gene is blc [H]

Identifier: 83593716

GI number: 83593716

Start: 2773269

End: 2773874

Strand: Reverse

Name: blc [H]

Synonym: Rru_A2381

Alternate gene names: 83593716

Gene position: 2773874-2773269 (Counterclockwise)

Preceding gene: 83593717

Following gene: 83593715

Centisome position: 63.73

GC content: 64.69

Gene sequence:

>606_bases
ATGGCTTTCATCACGATGTTTTTAGGCGATCTGGCCGGCGACGCCCTGCGCGTCGCCCGACGCGGCCGGGCGGGGGTGTT
TGGCCTGCTGGGGATGCTGGCGGGCTGTACCGGCGTGCCCGATGGCATCACCCCGGCCCAACCCTTCGAGGCCGGACGTT
ACCTTGGTCCCTGGTACGAGGTGATGCGCCTTGACCACGGTTTCGAGCGGGATCTCAGTGATGTGACCGCCACCTATGGT
CTGCGCCCCGACGGCAAGATCAGCGTGGTCAACAAGGGCTATGACACCAAGGCCTGCCGCTGGCGCTCGATCGAAGGCTA
CGCCACCTTCCAGAAGGGACCCGAAGTGCCCAGTCTGTCGGTCACCTTCTTCTGGCCGCTGGCCGGGGGCTATCACGTTT
TCGCCCTTGATCAGGCTGATTATGGCTATGCCCTGGTCTCGGGGCCGACGCGCGACTATCTGTGGATCCTCGCCCGCAAG
CCCGATCTCGACCCGGCGATCCGCGCGTCCCTGGTCGATATCGCCCGCGAAAACGGCTTCGCCGTTGACGAGTTGATCCT
GGTCGATCACCAGGGGCCCGTTTGCAAGACCGCCAAGGCCGGTTGA

Upstream 100 bases:

>100_bases
GCGGGTGGCGCGGGCGATGGGGCGGTTCGAGACCGGGGGACCGGCCGCTCCCGGTCGATGACGCCGCTACCGGCACCACA
GTCAAAGGGGACTTTCCGCC

Downstream 100 bases:

>100_bases
GCCGTCCGCTAAAGTCTTTTTCCCTTTCATCAGGATTTTGTCGTCCCGTGACCCCTTCCTCCCCCTGGCATGGCCGAAGC
TTGCTGCTGGCGGGCGCCAT

Product: lipocalin-like protein

Products: NA

Alternate protein names: Protein vlp [H]

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MAFITMFLGDLAGDALRVARRGRAGVFGLLGMLAGCTGVPDGITPAQPFEAGRYLGPWYEVMRLDHGFERDLSDVTATYG
LRPDGKISVVNKGYDTKACRWRSIEGYATFQKGPEVPSLSVTFFWPLAGGYHVFALDQADYGYALVSGPTRDYLWILARK
PDLDPAIRASLVDIARENGFAVDELILVDHQGPVCKTAKAG

Sequences:

>Translated_201_residues
MAFITMFLGDLAGDALRVARRGRAGVFGLLGMLAGCTGVPDGITPAQPFEAGRYLGPWYEVMRLDHGFERDLSDVTATYG
LRPDGKISVVNKGYDTKACRWRSIEGYATFQKGPEVPSLSVTFFWPLAGGYHVFALDQADYGYALVSGPTRDYLWILARK
PDLDPAIRASLVDIARENGFAVDELILVDHQGPVCKTAKAG
>Mature_200_residues
AFITMFLGDLAGDALRVARRGRAGVFGLLGMLAGCTGVPDGITPAQPFEAGRYLGPWYEVMRLDHGFERDLSDVTATYGL
RPDGKISVVNKGYDTKACRWRSIEGYATFQKGPEVPSLSVTFFWPLAGGYHVFALDQADYGYALVSGPTRDYLWILARKP
DLDPAIRASLVDIARENGFAVDELILVDHQGPVCKTAKAG

Specific function: Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids [H]

COG id: COG3040

COG function: function code M; Bacterial lipocalin

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the calycin superfamily. Lipocalin family [H]

Homologues:

Organism=Homo sapiens, GI4502163, Length=150, Percent_Identity=33.3333333333333, Blast_Score=71, Evalue=8e-13,
Organism=Escherichia coli, GI1790592, Length=153, Percent_Identity=47.7124183006536, Blast_Score=148, Evalue=2e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012674
- InterPro:   IPR011038
- InterPro:   IPR013208
- InterPro:   IPR022271
- InterPro:   IPR002446
- InterPro:   IPR022272 [H]

Pfam domain/function: PF08212 Lipocalin_2 [H]

EC number: NA

Molecular weight: Translated: 21893; Mature: 21762

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFITMFLGDLAGDALRVARRGRAGVFGLLGMLAGCTGVPDGITPAQPFEAGRYLGPWYE
CEEHEEHHHHHCHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHH
VMRLDHGFERDLSDVTATYGLRPDGKISVVNKGYDTKACRWRSIEGYATFQKGPEVPSLS
HHHHCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEECCCCEEEECCCCCCCCEE
VTFFWPLAGGYHVFALDQADYGYALVSGPTRDYLWILARKPDLDPAIRASLVDIARENGF
EEEEEECCCCEEEEEECCCCCCEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCC
AVDELILVDHQGPVCKTAKAG
EEEEEEEEECCCCCCCCCCCC
>Mature Secondary Structure 
AFITMFLGDLAGDALRVARRGRAGVFGLLGMLAGCTGVPDGITPAQPFEAGRYLGPWYE
EEHEEHHHHHCHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHH
VMRLDHGFERDLSDVTATYGLRPDGKISVVNKGYDTKACRWRSIEGYATFQKGPEVPSLS
HHHHCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEECCCCEEEECCCCCCCCEE
VTFFWPLAGGYHVFALDQADYGYALVSGPTRDYLWILARKPDLDPAIRASLVDIARENGF
EEEEEECCCCEEEEEECCCCCCEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCC
AVDELILVDHQGPVCKTAKAG
EEEEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8514410; 10952301 [H]