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The map label for this gene is yycB [H]

Identifier: 83593715

GI number: 83593715

Start: 2772010

End: 2773221

Strand: Reverse

Name: yycB [H]

Synonym: Rru_A2380

Alternate gene names: 83593715

Gene position: 2773221-2772010 (Counterclockwise)

Preceding gene: 83593716

Following gene: 83593714

Centisome position: 63.71

GC content: 70.63

Gene sequence:

>1212_bases
GTGACCCCTTCCTCCCCCTGGCATGGCCGAAGCTTGCTGCTGGCGGGCGCCATCGTTCTGGTCGCCCTCAACCTGCGACC
GGCGCTGAGCAGCGTCGGACCGGTTCTCAATGAAATCATGGCCGGTCTCGGTCTATCGGCCGCCCAGGCCAGTTGGCTGA
CCACCTTGCCGGTGCTGTGCCTGGGGCTGTTCGGCCCGCTGGCCCCCCGGCTGGCCCGCATCGTCGGCACCGACCGCCTG
ATCCTGGCCATGCTGGTGGTTCTGGCCGCCGCCATCGCCTTGCGCGGGGCGCATACGCCTTTGGCGCTGTTCATCGGCAC
GGCGGTGGGCGGTTTGGCGATCGGAGCGGTCAACGTGCTGCTGCCCGGGGTGCTCAAGCGCGATTACCCCGGCCATGCGG
TGGCGATGACCGGGGTGATGACCATGGCGATGTGCGGCGGAGCGGCGGTGGCCGCCGGGGCGACGGTGCCGCTGATGAAC
CGGCTGGACGGCGATTGGGCGGCGGCCCTGGCATGGTGGGTGGTGCCGGCCCTGATCGCCATCGTCGCCTGGGCCCCCTT
CGCCTTGAGGGGCAAGCGGGGCGGCAAGGCCGGCGGCGTGCTGCCGGTGGTCGGCCTGTGGCGCGACAAGGTGGCTTGGC
AGGTGACCTTGTTCATGGGCATGCAATCCTCGCTGGCCTATTGCGTGTTCGGCTGGCTGGCGCCGATCCTGCGCGACCGT
GGGATCTCGGCGGTGGAGGCCGGGCTGATGGTTTCGGTCTCGGTGCTGTGCCAATTGCCCACCGCCCTGGTCACCCCCAG
TCTGGCCGGTCGGGCGCGCGACCAGCGGCTGGCCGTGGTGCTGACCCAATGCGGAACGGCGATCGGACTGATGGGCTGCA
TGCTGGCCCCCCTGTCGCTGATCTGGGGCTTCGCCGTGATCCTCGGGCTGGCCCAGGGCGCCTCCTTCGCCACGGCGCTC
AGCCTGATCGTTTTGCGCTCGGGCGATAGCCATATCGCCGCCCATCTCTCGGGCATGGCTCAAGGGGTGGGCTATAGCGT
TTCGGCGATGGGCCCCTTGCTGGTCGGGCTGATCCACCAGCAGACCGGCAGTTGGGGTCCGGTGGCCGGGCTGTTCCTGG
CGATTGGCGCCTTGGCCCTGATCGCCGGCCTGGGGGCCGGACGGCGGCGCACCGTCGGCGCCCGGGTGGAAGGCCATGCG
TCCGCCGCCTGA

Upstream 100 bases:

>100_bases
TGATCCTGGTCGATCACCAGGGGCCCGTTTGCAAGACCGCCAAGGCCGGTTGAGCCGTCCGCTAAAGTCTTTTTCCCTTT
CATCAGGATTTTGTCGTCCC

Downstream 100 bases:

>100_bases
CCCCCTTCTTTTAGCCGGACACTTTCGACTAGGGTGGCGCGCCGAATAAGAGGATACTCCGGTTGCGTTGGGGGAGGGCC
GTCCCATCTTTGAGGGGGCC

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 402

Protein sequence:

>403_residues
MTPSSPWHGRSLLLAGAIVLVALNLRPALSSVGPVLNEIMAGLGLSAAQASWLTTLPVLCLGLFGPLAPRLARIVGTDRL
ILAMLVVLAAAIALRGAHTPLALFIGTAVGGLAIGAVNVLLPGVLKRDYPGHAVAMTGVMTMAMCGGAAVAAGATVPLMN
RLDGDWAAALAWWVVPALIAIVAWAPFALRGKRGGKAGGVLPVVGLWRDKVAWQVTLFMGMQSSLAYCVFGWLAPILRDR
GISAVEAGLMVSVSVLCQLPTALVTPSLAGRARDQRLAVVLTQCGTAIGLMGCMLAPLSLIWGFAVILGLAQGASFATAL
SLIVLRSGDSHIAAHLSGMAQGVGYSVSAMGPLLVGLIHQQTGSWGPVAGLFLAIGALALIAGLGAGRRRTVGARVEGHA
SAA

Sequences:

>Translated_403_residues
MTPSSPWHGRSLLLAGAIVLVALNLRPALSSVGPVLNEIMAGLGLSAAQASWLTTLPVLCLGLFGPLAPRLARIVGTDRL
ILAMLVVLAAAIALRGAHTPLALFIGTAVGGLAIGAVNVLLPGVLKRDYPGHAVAMTGVMTMAMCGGAAVAAGATVPLMN
RLDGDWAAALAWWVVPALIAIVAWAPFALRGKRGGKAGGVLPVVGLWRDKVAWQVTLFMGMQSSLAYCVFGWLAPILRDR
GISAVEAGLMVSVSVLCQLPTALVTPSLAGRARDQRLAVVLTQCGTAIGLMGCMLAPLSLIWGFAVILGLAQGASFATAL
SLIVLRSGDSHIAAHLSGMAQGVGYSVSAMGPLLVGLIHQQTGSWGPVAGLFLAIGALALIAGLGAGRRRTVGARVEGHA
SAA
>Mature_402_residues
TPSSPWHGRSLLLAGAIVLVALNLRPALSSVGPVLNEIMAGLGLSAAQASWLTTLPVLCLGLFGPLAPRLARIVGTDRLI
LAMLVVLAAAIALRGAHTPLALFIGTAVGGLAIGAVNVLLPGVLKRDYPGHAVAMTGVMTMAMCGGAAVAAGATVPLMNR
LDGDWAAALAWWVVPALIAIVAWAPFALRGKRGGKAGGVLPVVGLWRDKVAWQVTLFMGMQSSLAYCVFGWLAPILRDRG
ISAVEAGLMVSVSVLCQLPTALVTPSLAGRARDQRLAVVLTQCGTAIGLMGCMLAPLSLIWGFAVILGLAQGASFATALS
LIVLRSGDSHIAAHLSGMAQGVGYSVSAMGPLLVGLIHQQTGSWGPVAGLFLAIGALALIAGLGAGRRRTVGARVEGHAS
AA

Specific function: Unknown

COG id: COG2807

COG function: function code P; Cyanate permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Cyanate porter (TC 2.A.1.17) family [H]

Homologues:

Organism=Escherichia coli, GI1788092, Length=403, Percent_Identity=37.2208436724566, Blast_Score=188, Evalue=7e-49,
Organism=Escherichia coli, GI1786536, Length=349, Percent_Identity=27.5071633237822, Blast_Score=108, Evalue=5e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004747
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 40941; Mature: 40809

Theoretical pI: Translated: 11.28; Mature: 11.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TPSSPWHGRSLLLAGAIVLVALNLRPALSSVGPVLNEIMAGLGLSAAQASWLTTLPVLC
CCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LGLFGPLAPRLARIVGTDRLILAMLVVLAAAIALRGAHTPLALFIGTAVGGLAIGAVNVL
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
LPGVLKRDYPGHAVAMTGVMTMAMCGGAAVAAGATVPLMNRLDGDWAAALAWWVVPALIA
HHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHH
IVAWAPFALRGKRGGKAGGVLPVVGLWRDKVAWQVTLFMGMQSSLAYCVFGWLAPILRDR
HHHHCCHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GISAVEAGLMVSVSVLCQLPTALVTPSLAGRARDQRLAVVLTQCGTAIGLMGCMLAPLSL
CCHHHHHHHHHHHHHHHHCCHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IWGFAVILGLAQGASFATALSLIVLRSGDSHIAAHLSGMAQGVGYSVSAMGPLLVGLIHQ
HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
QTGSWGPVAGLFLAIGALALIAGLGAGRRRTVGARVEGHASAA
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]