| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
Click here to switch to the map view.
The map label for this gene is 83593583
Identifier: 83593583
GI number: 83593583
Start: 2610524
End: 2611081
Strand: Reverse
Name: 83593583
Synonym: Rru_A2248
Alternate gene names: NA
Gene position: 2611081-2610524 (Counterclockwise)
Preceding gene: 83593584
Following gene: 83593582
Centisome position: 59.99
GC content: 63.8
Gene sequence:
>558_bases ATGAGCATCCCCGAAGAGGCCCTGCAACGTCATGTTGACGAACAGGCTGAGTCCGCCAAACTCCATTACCAGGAACGCTG GGCCACCAATTACGCCGCGCTCCAGACTGGCGACGAACGCGAGGCTGAGTTGCTGCTGGCGGGCTATCTACTGACCATCA TCGACGGTTACGAGAAGGTCGAATTCCGCGCGGCCTGGGATGTGCACTCAGATCCGGCCTGGGGCACCATCATGGGCTAC CGGGTCAAGGTCGGCGGCCACACGGCGGACTTTTTGTTCCGGTGCTGCCAGGGCGATGATCGGCGCCTGCTGGCGGTAAC CCTGGACGCCCGGGACGGACGCCAACGTGCTCCCGAGGCGATTGCCCGGGATCGAGGTCTGATGGATGCCACGTGCCGGG TGATGAATTACACCGATGCCCAGGTGCTGGCGCGGCCGACGGATATCGCGGACGAGATCTCCGAGGCGTTGAGCGATCTC GTTGAGGAGATGCTGGCGGCGGCGGGGTACATCCGGGGATCGCGCCCGTCCAACGTCACTCCGATTGGGCAGAGATGA
Upstream 100 bases:
>100_bases CTGCGGCTTCCTCCTCGCCGCTGCGCGTCTCTCCCTGTTGCTGTCCGCTATCAGATGGGGCAATTTCGGAGGCAGCAGCC ACAACCGAAGGTCGCCATCC
Downstream 100 bases:
>100_bases GAATGATCGACTTCAAGGAAATTCCAAACGGAGAGCAATGGGAATTGTTCGCCCAGGCGTTCCTGCGGCAACTGGGCTTC ACAATTGAGATCCCGCCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MSIPEEALQRHVDEQAESAKLHYQERWATNYAALQTGDEREAELLLAGYLLTIIDGYEKVEFRAAWDVHSDPAWGTIMGY RVKVGGHTADFLFRCCQGDDRRLLAVTLDARDGRQRAPEAIARDRGLMDATCRVMNYTDAQVLARPTDIADEISEALSDL VEEMLAAAGYIRGSRPSNVTPIGQR
Sequences:
>Translated_185_residues MSIPEEALQRHVDEQAESAKLHYQERWATNYAALQTGDEREAELLLAGYLLTIIDGYEKVEFRAAWDVHSDPAWGTIMGY RVKVGGHTADFLFRCCQGDDRRLLAVTLDARDGRQRAPEAIARDRGLMDATCRVMNYTDAQVLARPTDIADEISEALSDL VEEMLAAAGYIRGSRPSNVTPIGQR >Mature_184_residues SIPEEALQRHVDEQAESAKLHYQERWATNYAALQTGDEREAELLLAGYLLTIIDGYEKVEFRAAWDVHSDPAWGTIMGYR VKVGGHTADFLFRCCQGDDRRLLAVTLDARDGRQRAPEAIARDRGLMDATCRVMNYTDAQVLARPTDIADEISEALSDLV EEMLAAAGYIRGSRPSNVTPIGQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20671; Mature: 20540
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIPEEALQRHVDEQAESAKLHYQERWATNYAALQTGDEREAELLLAGYLLTIIDGYEKV CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHCCCHHE EFRAAWDVHSDPAWGTIMGYRVKVGGHTADFLFRCCQGDDRRLLAVTLDARDGRQRAPEA EEEEEECCCCCCCCCEEEEEEEEECCCHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHH IARDRGLMDATCRVMNYTDAQVLARPTDIADEISEALSDLVEEMLAAAGYIRGSRPSNVT HHHHCCCHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC PIGQR CCCCC >Mature Secondary Structure SIPEEALQRHVDEQAESAKLHYQERWATNYAALQTGDEREAELLLAGYLLTIIDGYEKV CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHCCCHHE EFRAAWDVHSDPAWGTIMGYRVKVGGHTADFLFRCCQGDDRRLLAVTLDARDGRQRAPEA EEEEEECCCCCCCCCEEEEEEEEECCCHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHH IARDRGLMDATCRVMNYTDAQVLARPTDIADEISEALSDLVEEMLAAAGYIRGSRPSNVT HHHHCCCHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC PIGQR CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA