| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is bfr [H]
Identifier: 83593530
GI number: 83593530
Start: 2550128
End: 2550607
Strand: Reverse
Name: bfr [H]
Synonym: Rru_A2195
Alternate gene names: 83593530
Gene position: 2550607-2550128 (Counterclockwise)
Preceding gene: 83593531
Following gene: 83593526
Centisome position: 58.6
GC content: 57.5
Gene sequence:
>480_bases ATGAAGGGTGATCCCGCGATCATCAAACGCCTGAACGGCGTTTTGAAAAACGAACTCACCGCGATCAACCAGTATTTCCT GCATGCCCGCATGCTGCAGAACTGGGGGCTTACCCGGCTTGGCAAGCGCGAATTCAAGGAATCCATCGAAGAGATGGAGC ATGCCGACAAGCTGATCAAACGGGTGTTGTTCCTGGAAGGCCTGCCCAATCTGCAAGACCTGGGCAAGCTGCGCATCGGC GAAACCGTGCGCGAGGTGCTGGAAAACGATCTGGCCTTGGAACTGGCGGCGCGCGACACCCTGGTCGAGGGCGTGGCCGA GGCCGAAGCGGCCCAGGATTTCGTCTCCCGCCAAATTCTCGATGAGATCCTCGAAGATACCGAAGAACACATCGACTATC TGGAAACCGAGATCGGCCTGATCGATCAGGTTGGCCCGCAGAACTACATCCAATCGCAGATCGACGCCGGCGAAAGCTGA
Upstream 100 bases:
>100_bases CTAGACCCGGGGGATGCGATCCATGCGTCCCTTACGGATAACCGGCGCGCGGGCTGCGGCCCCCTCGTGATGCCCCGTGC GCCCAAAGGGGACGACATCG
Downstream 100 bases:
>100_bases AAAAAAACGCCCAGACCGGCGCCCTCCGGTCCAACAGAAGTCCGCCAGCCCCCCCCTTGTCGGGCAGGGCTGGCGGAAGC TTGGAGTAGTGAAGCGGGGA
Product: bacterioferritin
Products: NA
Alternate protein names: BFR; Cytochrome b-1; Cytochrome b-557 [H]
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MKGDPAIIKRLNGVLKNELTAINQYFLHARMLQNWGLTRLGKREFKESIEEMEHADKLIKRVLFLEGLPNLQDLGKLRIG ETVREVLENDLALELAARDTLVEGVAEAEAAQDFVSRQILDEILEDTEEHIDYLETEIGLIDQVGPQNYIQSQIDAGES
Sequences:
>Translated_159_residues MKGDPAIIKRLNGVLKNELTAINQYFLHARMLQNWGLTRLGKREFKESIEEMEHADKLIKRVLFLEGLPNLQDLGKLRIG ETVREVLENDLALELAARDTLVEGVAEAEAAQDFVSRQILDEILEDTEEHIDYLETEIGLIDQVGPQNYIQSQIDAGES >Mature_159_residues MKGDPAIIKRLNGVLKNELTAINQYFLHARMLQNWGLTRLGKREFKESIEEMEHADKLIKRVLFLEGLPNLQDLGKLRIG ETVREVLENDLALELAARDTLVEGVAEAEAAQDFVSRQILDEILEDTEEHIDYLETEIGLIDQVGPQNYIQSQIDAGES
Specific function: May perform analogous functions in iron detoxification and storage to that of animal ferritins [H]
COG id: COG2193
COG function: function code P; Bacterioferritin (cytochrome b1)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ferritin-like diiron domain [H]
Homologues:
Organism=Escherichia coli, GI1789733, Length=154, Percent_Identity=61.038961038961, Blast_Score=191, Evalue=2e-50,
Paralogues:
None
Copy number: 1639 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002024 - InterPro: IPR009040 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR008331 [H]
Pfam domain/function: PF00210 Ferritin [H]
EC number: NA
Molecular weight: Translated: 18042; Mature: 18042
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: PS50905 FERRITIN_LIKE ; PS00549 BACTERIOFERRITIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGDPAIIKRLNGVLKNELTAINQYFLHARMLQNWGLTRLGKREFKESIEEMEHADKLIK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH RVLFLEGLPNLQDLGKLRIGETVREVLENDLALELAARDTLVEGVAEAEAAQDFVSRQIL HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DEILEDTEEHIDYLETEIGLIDQVGPQNYIQSQIDAGES HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCC >Mature Secondary Structure MKGDPAIIKRLNGVLKNELTAINQYFLHARMLQNWGLTRLGKREFKESIEEMEHADKLIK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH RVLFLEGLPNLQDLGKLRIGETVREVLENDLALELAARDTLVEGVAEAEAAQDFVSRQIL HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DEILEDTEEHIDYLETEIGLIDQVGPQNYIQSQIDAGES HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA