| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83593519
Identifier: 83593519
GI number: 83593519
Start: 2536082
End: 2536699
Strand: Reverse
Name: 83593519
Synonym: Rru_A2184
Alternate gene names: NA
Gene position: 2536699-2536082 (Counterclockwise)
Preceding gene: 83593520
Following gene: 83593518
Centisome position: 58.28
GC content: 65.21
Gene sequence:
>618_bases ATGGCCGAGGATACCCGTCTGACGACGATCGCCGAGCTTGAAGCGCTTTATGGCCGCCCGTCGGGAGGGGCGGTGAGCAA GGAAACCGATCATCTGATCGCGCCCTATCGCCGTTTCGTCGAAGCCGCGCCTTTTCTCAGTCTGGCCACCCGGGGCGAGA AGGGCGTGGAATGCTCGCCGCGTGGCGATGCTCCGGGCTTCGTCAAGGTGCTTGATCCCCGGACCCTGCTGGTGCCCGAT CGCAAGGGCAACCGGCGCATGGAATCTTTGCGCAATATCCTGACCGATCCCCATGTCGCCCTGCTGTTCCTGATCCCCGG GGTCGGCGAGACCCTGCGGGTGCGCGGCCGGGCGATCATCTCCACCGATCCCGCCTTGCTCGCGCTTGGGACGATGCGGG GCACCCCGCCGTTGTCGGCCCTGGTGGTCAGCATTGACAGCGTGCTGTTCCAATGCTCGCGGGCGATCGCCCGTTCGGGG CTGTGGACCGACGAGGCGCGTGTTGAGCGCGCAAGCCTACCCACCGCCGGCGAAATGCTCAAAGCCACCGATGCCACTTT CGATGGCGATGGCTTCGATCAGGCCTGGAAGACCGAAGAAAAGGCCGGGATGGTTTGA
Upstream 100 bases:
>100_bases TTCCTAGCACTTCTGGACAAGCCGCCGGCGCCGACGCCAGCCCTGCGCGAAGCCGCCCGCCGCTATTTTCTTCACCCTTC TTTGCCCAGGATCCCCCCCG
Downstream 100 bases:
>100_bases TCGGGCGCTTTTGCGCGGCGACCCCACGGAAATCCGGGCTTTACGACCCGGGGTAATTCGCTTATGCGAAAGATCTTGGG GTCTTGTTCGCCCCGGCTTA
Product: pyridoxamine 5'-phosphate oxidase-related, FMN-binding
Products: NA
Alternate protein names: Phosphohydrolase; Pyridoxamine 5-Phosphate Oxidase; Pyridoxamine 5-Phosphate Oxidase-Like Protein; Pyridoxamine 5-Phosphate Oxidase-Related Protein; NTP Pyrophosphohydrolase; Pyridoxine Biosynthesis Protein; Phenylacetate-CoA Oxygenase/Reductase PaaK Subunit; Transcriptional Regulator AraC Family; Pyridoxamine 5-Phosphate Oxidase Family; Fmn Flavoprotein; Pyridoxamine 5\-Phosphate Oxidase Family Protein; Pyridoxamine 5-Phosphate Oxidase-Related
Number of amino acids: Translated: 205; Mature: 204
Protein sequence:
>205_residues MAEDTRLTTIAELEALYGRPSGGAVSKETDHLIAPYRRFVEAAPFLSLATRGEKGVECSPRGDAPGFVKVLDPRTLLVPD RKGNRRMESLRNILTDPHVALLFLIPGVGETLRVRGRAIISTDPALLALGTMRGTPPLSALVVSIDSVLFQCSRAIARSG LWTDEARVERASLPTAGEMLKATDATFDGDGFDQAWKTEEKAGMV
Sequences:
>Translated_205_residues MAEDTRLTTIAELEALYGRPSGGAVSKETDHLIAPYRRFVEAAPFLSLATRGEKGVECSPRGDAPGFVKVLDPRTLLVPD RKGNRRMESLRNILTDPHVALLFLIPGVGETLRVRGRAIISTDPALLALGTMRGTPPLSALVVSIDSVLFQCSRAIARSG LWTDEARVERASLPTAGEMLKATDATFDGDGFDQAWKTEEKAGMV >Mature_204_residues AEDTRLTTIAELEALYGRPSGGAVSKETDHLIAPYRRFVEAAPFLSLATRGEKGVECSPRGDAPGFVKVLDPRTLLVPDR KGNRRMESLRNILTDPHVALLFLIPGVGETLRVRGRAIISTDPALLALGTMRGTPPLSALVVSIDSVLFQCSRAIARSGL WTDEARVERASLPTAGEMLKATDATFDGDGFDQAWKTEEKAGMV
Specific function: Unknown
COG id: COG3576
COG function: function code R; Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22133; Mature: 22001
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEDTRLTTIAELEALYGRPSGGAVSKETDHLIAPYRRFVEAAPFLSLATRGEKGVECSP CCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCC RGDAPGFVKVLDPRTLLVPDRKGNRRMESLRNILTDPHVALLFLIPGVGETLRVRGRAII CCCCCCEEEEECCCEEEECCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCEEEECCCEEE STDPALLALGTMRGTPPLSALVVSIDSVLFQCSRAIARSGLWTDEARVERASLPTAGEML ECCCHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHH KATDATFDGDGFDQAWKTEEKAGMV HHCCCCCCCCCCCHHHCCHHHCCCC >Mature Secondary Structure AEDTRLTTIAELEALYGRPSGGAVSKETDHLIAPYRRFVEAAPFLSLATRGEKGVECSP CCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCC RGDAPGFVKVLDPRTLLVPDRKGNRRMESLRNILTDPHVALLFLIPGVGETLRVRGRAII CCCCCCEEEEECCCEEEECCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCEEEECCCEEE STDPALLALGTMRGTPPLSALVVSIDSVLFQCSRAIARSGLWTDEARVERASLPTAGEML ECCCHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHH KATDATFDGDGFDQAWKTEEKAGMV HHCCCCCCCCCCCHHHCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA