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The map label for this gene is perM [C]

Identifier: 83593499

GI number: 83593499

Start: 2513048

End: 2514157

Strand: Reverse

Name: perM [C]

Synonym: Rru_A2164

Alternate gene names: 83593499

Gene position: 2514157-2513048 (Counterclockwise)

Preceding gene: 83593500

Following gene: 83593498

Centisome position: 57.76

GC content: 63.15

Gene sequence:

>1110_bases
ATGAACCGCGACAAACAAATCCGTGTCTGGCTTATCGGCATCCTGGTTTTCGCCGTTCTGATCTTTCTGCTGCGCTCGGT
GCTGCTGCCCTTCGTCACCGGGCTCGCCGTCGCCTATTTTCTCGATCCGCTGGCCGATCGCCTGGAAAAATGGGGAACCT
CGCGGCTGTGGGCGGTCATCTGGATCACCCTTGGCTTCGTGCTGGTCATGGTGCTGGCGCTTCTGGTGCTGTTGCCCCTG
ATCAACGGCCAGATCGCCGATTTCGTCACCAATATGCCCGAATACGCCCGGGCCCTGGTCGGCAAGGGGCGGGCACTGCT
TGATAATCTGGTCGATGTTTTGGGCCCCGACCGCATGAGCGATGTCACCTCGTCGCTGGAGGCGGCGGCCGGCGAAGCCA
CCAAATGGCTGGGCGGGCTGGTCAATCAGCTGATCAGCGGCGGCGCCGCCCTGATCAATCTGGTGTCGGTGCTGGTCATC
ACCCCGGTCATCGCCTTCTATATGCTGCGCGATTGGGATGTCATGGTGGCGTCGATCGACCGCTGGCTGCCCCGGCCCTA
CGCCCCGGTGATCCGCGCCCAAATGGCCGAGATTGATCGCACCATCGCCGGGTTCGTGCGCGGTCAAGCCAGCGTCTGTC
TGGCCCTGGGCTCGTTCTACGCCATCGGCTTGACCATCGGCGGGCTTGATCTCGGGCTGATCGTCGGCATGATTTCGGGG
TTGCTGTCGTTCATTCCCTATGTGGGAACCATCACCGGCTTCATCGTGTCGATGGGGTTGGCCCTGGCCCAATTCGACAG
CTGGATCGATACGGCGATCATCGCCGGCATCTTCGTTGTCGGCCAGATGATCGAAGGCAATTATCTGACGCCCAAGCTGG
TGGGCGACCGCATCGGCCTGCATCCGGTCTGGGTGATCTTTGCCCTGCTCGCCGGCGGCGGATTGTTCGGTTTCCTGGGC
GTCTTGCTGGCGGTGCCGCTGGCCGCGGTGATCGGCGTGCTGGTGCGCTTCTTCCTGGGCCGCTATCTCAACAGCCCGCT
TTATACCGGAGCCACCCCGGAAGCCCCGGCCGTGACTCGGGTCCCCCCGGACAACGGGGCGCCTGAATGA

Upstream 100 bases:

>100_bases
TCGCCTATCTGCGGATGTGGCTGCGCCGGGGCTGGGATGGCCAGCAGGCCCACGACCGAATCGAACGAACCCGGCGCAAT
AATCAGCAAAGAGACGACCG

Downstream 100 bases:

>100_bases
GCGCCGGGGTGCAGCTTCCGCTGGATCTGCCCTGGCGGCCGGCCCTGGGGCGCGAACATTTTCTGGTGGCCGCCTGCAAT
GCCAGCGCCGTCGCTCTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MNRDKQIRVWLIGILVFAVLIFLLRSVLLPFVTGLAVAYFLDPLADRLEKWGTSRLWAVIWITLGFVLVMVLALLVLLPL
INGQIADFVTNMPEYARALVGKGRALLDNLVDVLGPDRMSDVTSSLEAAAGEATKWLGGLVNQLISGGAALINLVSVLVI
TPVIAFYMLRDWDVMVASIDRWLPRPYAPVIRAQMAEIDRTIAGFVRGQASVCLALGSFYAIGLTIGGLDLGLIVGMISG
LLSFIPYVGTITGFIVSMGLALAQFDSWIDTAIIAGIFVVGQMIEGNYLTPKLVGDRIGLHPVWVIFALLAGGGLFGFLG
VLLAVPLAAVIGVLVRFFLGRYLNSPLYTGATPEAPAVTRVPPDNGAPE

Sequences:

>Translated_369_residues
MNRDKQIRVWLIGILVFAVLIFLLRSVLLPFVTGLAVAYFLDPLADRLEKWGTSRLWAVIWITLGFVLVMVLALLVLLPL
INGQIADFVTNMPEYARALVGKGRALLDNLVDVLGPDRMSDVTSSLEAAAGEATKWLGGLVNQLISGGAALINLVSVLVI
TPVIAFYMLRDWDVMVASIDRWLPRPYAPVIRAQMAEIDRTIAGFVRGQASVCLALGSFYAIGLTIGGLDLGLIVGMISG
LLSFIPYVGTITGFIVSMGLALAQFDSWIDTAIIAGIFVVGQMIEGNYLTPKLVGDRIGLHPVWVIFALLAGGGLFGFLG
VLLAVPLAAVIGVLVRFFLGRYLNSPLYTGATPEAPAVTRVPPDNGAPE
>Mature_369_residues
MNRDKQIRVWLIGILVFAVLIFLLRSVLLPFVTGLAVAYFLDPLADRLEKWGTSRLWAVIWITLGFVLVMVLALLVLLPL
INGQIADFVTNMPEYARALVGKGRALLDNLVDVLGPDRMSDVTSSLEAAAGEATKWLGGLVNQLISGGAALINLVSVLVI
TPVIAFYMLRDWDVMVASIDRWLPRPYAPVIRAQMAEIDRTIAGFVRGQASVCLALGSFYAIGLTIGGLDLGLIVGMISG
LLSFIPYVGTITGFIVSMGLALAQFDSWIDTAIIAGIFVVGQMIEGNYLTPKLVGDRIGLHPVWVIFALLAGGGLFGFLG
VLLAVPLAAVIGVLVRFFLGRYLNSPLYTGATPEAPAVTRVPPDNGAPE

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=325, Percent_Identity=27.0769230769231, Blast_Score=117, Evalue=1e-27,
Organism=Escherichia coli, GI87082271, Length=309, Percent_Identity=25.5663430420712, Blast_Score=73, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 39561; Mature: 39561

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRDKQIRVWLIGILVFAVLIFLLRSVLLPFVTGLAVAYFLDPLADRLEKWGTSRLWAVI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
WITLGFVLVMVLALLVLLPLINGQIADFVTNMPEYARALVGKGRALLDNLVDVLGPDRMS
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHCCCHHH
DVTSSLEAAAGEATKWLGGLVNQLISGGAALINLVSVLVITPVIAFYMLRDWDVMVASID
HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RWLPRPYAPVIRAQMAEIDRTIAGFVRGQASVCLALGSFYAIGLTIGGLDLGLIVGMISG
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLSFIPYVGTITGFIVSMGLALAQFDSWIDTAIIAGIFVVGQMIEGNYLTPKLVGDRIGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCC
HPVWVIFALLAGGGLFGFLGVLLAVPLAAVIGVLVRFFLGRYLNSPLYTGATPEAPAVTR
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
VPPDNGAPE
CCCCCCCCC
>Mature Secondary Structure
MNRDKQIRVWLIGILVFAVLIFLLRSVLLPFVTGLAVAYFLDPLADRLEKWGTSRLWAVI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
WITLGFVLVMVLALLVLLPLINGQIADFVTNMPEYARALVGKGRALLDNLVDVLGPDRMS
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHCCCHHH
DVTSSLEAAAGEATKWLGGLVNQLISGGAALINLVSVLVITPVIAFYMLRDWDVMVASID
HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RWLPRPYAPVIRAQMAEIDRTIAGFVRGQASVCLALGSFYAIGLTIGGLDLGLIVGMISG
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLSFIPYVGTITGFIVSMGLALAQFDSWIDTAIIAGIFVVGQMIEGNYLTPKLVGDRIGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCC
HPVWVIFALLAGGGLFGFLGVLLAVPLAAVIGVLVRFFLGRYLNSPLYTGATPEAPAVTR
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
VPPDNGAPE
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]