| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is opgH [H]
Identifier: 83593468
GI number: 83593468
Start: 2477446
End: 2479488
Strand: Reverse
Name: opgH [H]
Synonym: Rru_A2133
Alternate gene names: 83593468
Gene position: 2479488-2477446 (Counterclockwise)
Preceding gene: 83593469
Following gene: 83593467
Centisome position: 56.96
GC content: 67.55
Gene sequence:
>2043_bases ATGTTACTGCGACGCAGGTTGTTCGTTCTCTGCATCCTGATCCTGACGATCACGGCCGTGCAGTCGTTCGTCCATGTTCT ATCGGGCGATGGTCTGTCCGCCCTCGATCTGGCTTTGACCGCCGTTTTCGTGCCTTTGGCGGCTTGGCTCGCCCAGTCGT TCTGCACGCTGACCGCCGGCGCCCTGATGATCGCTACCCAGCGCTTCAGTTGGCGCCGCCGGCGGGACGAACTGGCCGAT ATCGCCAGCGGGCTGGTTGACAGCCTGCCGCGCGTCGCCATCGTCATGCCGGTCTATAACGAGGATTCGGGCCGGGTGTT CGCCGGGGTCGCCGCCATGCGCGACGAATTGCGCGCCCTGGGCGTGGCCAAGCGCTTCGACGTGTTCATCCTCAGCGACA GCACCGATGGCGACAACTGGCTGGCCGAGGAAGAGGCCTGGGACAGCGAGCGCCACCGCGTTGGCGATAGCCCCCGGCTT TTCTACCGGCGGCGTTTTCGCAACATCAAGCGCAAGACCGGCAATATCGGCCAGTTCGTCGAACGTCACGGCGCCGCCTA TGGCTATATGGTCGTGCTCGATGCCGACAGCCTGATGTCGGGCGAGGCCATCTGGGTTCTGACCCGGCGCATGGACGCCG AGCGGCGGACGGCGCTGATCCAGGCGCCGCCCAAGCTGATCATGGGCGATACGCCGTTTTCGCGGATGCTGCAGTTCGCC GGCGATGTCTATGGGCCGCTGAGTTCGGCCGGTCTGGCCTTCTGGGCCGGGGGCGAGGGCAACTATTGGGGCCATAACGC CATCATCCGCGTTGACGCCTTCGCCGCCTGCTGCGGCCTGCCGGCCTTGCCCGGCCGCGCCCCGCTGGGGGGGGATATCC TCTCCCACGACTTCGTCGAGGCCGCCCTGTTGCGCCGCGCCGGCTGGAAGGTGCGCATCGCCTGGGATCTGGGCGGCAGC TATGAGGAGCCGCCTCCGACCATGGAAGACTTCATGGTCCGCGACCGGCGCTGGTGCCAGGGCAATATGCAGCATGGGCG GATCTTGTTCGCCCGCGGCCTGCACGGCGTCAGCCGCAGCCATCTGTTGATCGGCATCATGTCCTATGTGACCTCGCCGC TGTGGCTGATCTTCCTGATCCTGTCGGGCATGCAGGCCTGGACGCTGGCCCGGGCCAAGGCGGTTTACTTCCAGCAGGGC GTGCCCTGGGCGACTTGGCCGATTTCGCGCGAGGAAGAGGCGGCCTATCTGCTGGCCGGTACCCTGGGCATGCTGTTCCT GCCCAAGATCTGGGGTCTGCTGCTGGCGATTTTCCACGGACCGACCCGGCGCGCCCATGGCGGCGGTCTGGCTCTGGTCG GCGGCTTCTTCCTGGAAAACCTGATTTCCGCCCTGGTCGCGCCGATCATGATGATCCGCCACAGCCAGTTCGTCGTCTCC ATCCTGACCGGGGCCAAGGTCGACTGGAAGCCGCAGCGGCGCACCGCCGACAAGGGCAATCTGCGGGTGGCCTTGGCGTC CTATAAGGACGTGATGGTGATCGGCATAGCCGCCGTCGCCTTTGTTCTGTGGGCGGCGCCGTCGCTGGGCGTCTGGCTGT CGCCGGTGCTCGCCGGCCTGCTTGGCGCGCCGTTCCTGGCGATGGCGTTGGGCGATCCCGACCTGGGCGCCGCGCTGCGC CGTCGCGGGTTGCTGGTCATCCCCGAGGAGATCACGCCGCCCAGCGTTCTGACCCGCATGGAAGAGCGTCTGGCCGCCCG GCCGCCGACGGCCGAGGCGCCGGAATCGCGCTTTTCGCGCGTCATCCTTGATCCGGGCACCAACGCCCGCCACCGCGCCC TGATCCAGGCCACCGGCGAAGCGCCGACCGCCCCGGTCGAGGTGATGGAGCGTGCCGTCGGCTTGGCCATCCATCTTGGC CCCGAGGCCCTGGGCAAGGACGAGCGCAAGGCTCTGCTGGAATGTCCCGAACGCCTGGAGCAACTGCATGTGGCGTGCTG GGCGAGGCGTCTGGAAGATCGCGGCGGGGTGGCGCCCGGCTGA
Upstream 100 bases:
>100_bases ATGATACATTGGGAGCGGTGTCGCCCGGGGTTCGGCGCGACACCGCTCCCCGACTATTAACGGCCGGGCTTTCCGGCGCC AAAAGGAGCGGGCGACCGCC
Downstream 100 bases:
>100_bases ACGGCATAGGCCGTTTGCCGGCCCTTGCCGAGAGCGGAAGGCGGCTCTAGATCTTAAGCGTGGGGACGCCGAAATCCGGC ACTTTCGGGGCAGGGGATCG
Product: glucosyltransferase MdoH
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 680; Mature: 680
Protein sequence:
>680_residues MLLRRRLFVLCILILTITAVQSFVHVLSGDGLSALDLALTAVFVPLAAWLAQSFCTLTAGALMIATQRFSWRRRRDELAD IASGLVDSLPRVAIVMPVYNEDSGRVFAGVAAMRDELRALGVAKRFDVFILSDSTDGDNWLAEEEAWDSERHRVGDSPRL FYRRRFRNIKRKTGNIGQFVERHGAAYGYMVVLDADSLMSGEAIWVLTRRMDAERRTALIQAPPKLIMGDTPFSRMLQFA GDVYGPLSSAGLAFWAGGEGNYWGHNAIIRVDAFAACCGLPALPGRAPLGGDILSHDFVEAALLRRAGWKVRIAWDLGGS YEEPPPTMEDFMVRDRRWCQGNMQHGRILFARGLHGVSRSHLLIGIMSYVTSPLWLIFLILSGMQAWTLARAKAVYFQQG VPWATWPISREEEAAYLLAGTLGMLFLPKIWGLLLAIFHGPTRRAHGGGLALVGGFFLENLISALVAPIMMIRHSQFVVS ILTGAKVDWKPQRRTADKGNLRVALASYKDVMVIGIAAVAFVLWAAPSLGVWLSPVLAGLLGAPFLAMALGDPDLGAALR RRGLLVIPEEITPPSVLTRMEERLAARPPTAEAPESRFSRVILDPGTNARHRALIQATGEAPTAPVEVMERAVGLAIHLG PEALGKDERKALLECPERLEQLHVACWARRLEDRGGVAPG
Sequences:
>Translated_680_residues MLLRRRLFVLCILILTITAVQSFVHVLSGDGLSALDLALTAVFVPLAAWLAQSFCTLTAGALMIATQRFSWRRRRDELAD IASGLVDSLPRVAIVMPVYNEDSGRVFAGVAAMRDELRALGVAKRFDVFILSDSTDGDNWLAEEEAWDSERHRVGDSPRL FYRRRFRNIKRKTGNIGQFVERHGAAYGYMVVLDADSLMSGEAIWVLTRRMDAERRTALIQAPPKLIMGDTPFSRMLQFA GDVYGPLSSAGLAFWAGGEGNYWGHNAIIRVDAFAACCGLPALPGRAPLGGDILSHDFVEAALLRRAGWKVRIAWDLGGS YEEPPPTMEDFMVRDRRWCQGNMQHGRILFARGLHGVSRSHLLIGIMSYVTSPLWLIFLILSGMQAWTLARAKAVYFQQG VPWATWPISREEEAAYLLAGTLGMLFLPKIWGLLLAIFHGPTRRAHGGGLALVGGFFLENLISALVAPIMMIRHSQFVVS ILTGAKVDWKPQRRTADKGNLRVALASYKDVMVIGIAAVAFVLWAAPSLGVWLSPVLAGLLGAPFLAMALGDPDLGAALR RRGLLVIPEEITPPSVLTRMEERLAARPPTAEAPESRFSRVILDPGTNARHRALIQATGEAPTAPVEVMERAVGLAIHLG PEALGKDERKALLECPERLEQLHVACWARRLEDRGGVAPG >Mature_680_residues MLLRRRLFVLCILILTITAVQSFVHVLSGDGLSALDLALTAVFVPLAAWLAQSFCTLTAGALMIATQRFSWRRRRDELAD IASGLVDSLPRVAIVMPVYNEDSGRVFAGVAAMRDELRALGVAKRFDVFILSDSTDGDNWLAEEEAWDSERHRVGDSPRL FYRRRFRNIKRKTGNIGQFVERHGAAYGYMVVLDADSLMSGEAIWVLTRRMDAERRTALIQAPPKLIMGDTPFSRMLQFA GDVYGPLSSAGLAFWAGGEGNYWGHNAIIRVDAFAACCGLPALPGRAPLGGDILSHDFVEAALLRRAGWKVRIAWDLGGS YEEPPPTMEDFMVRDRRWCQGNMQHGRILFARGLHGVSRSHLLIGIMSYVTSPLWLIFLILSGMQAWTLARAKAVYFQQG VPWATWPISREEEAAYLLAGTLGMLFLPKIWGLLLAIFHGPTRRAHGGGLALVGGFFLENLISALVAPIMMIRHSQFVVS ILTGAKVDWKPQRRTADKGNLRVALASYKDVMVIGIAAVAFVLWAAPSLGVWLSPVLAGLLGAPFLAMALGDPDLGAALR RRGLLVIPEEITPPSVLTRMEERLAARPPTAEAPESRFSRVILDPGTNARHRALIQATGEAPTAPVEVMERAVGLAIHLG PEALGKDERKALLECPERLEQLHVACWARRLEDRGGVAPG
Specific function: Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs) [H]
COG id: COG2943
COG function: function code M; Membrane glycosyltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family. OpgH subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787287, Length=688, Percent_Identity=38.2267441860465, Blast_Score=410, Evalue=1e-115,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: 2.4.1.- [C]
Molecular weight: Translated: 74651; Mature: 74651
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLRRRLFVLCILILTITAVQSFVHVLSGDGLSALDLALTAVFVPLAAWLAQSFCTLTAG CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALMIATQRFSWRRRRDELADIASGLVDSLPRVAIVMPVYNEDSGRVFAGVAAMRDELRAL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCEEHHHHHHHHHHHHH GVAKRFDVFILSDSTDGDNWLAEEEAWDSERHRVGDSPRLFYRRRFRNIKRKTGNIGQFV CCHHHCEEEEEECCCCCCCCCCCHHHCCCHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHH ERHGAAYGYMVVLDADSLMSGEAIWVLTRRMDAERRTALIQAPPKLIMGDTPFSRMLQFA HHHCCCEEEEEEEECCCCCCCCEEEEEEHHCCHHHHHHHHCCCCCEEECCCCHHHHHHHH GDVYGPLSSAGLAFWAGGEGNYWGHNAIIRVDAFAACCGLPALPGRAPLGGDILSHDFVE HHHCCCCCCCCEEEEECCCCCCCCCCEEEEEHHHHHHHCCCCCCCCCCCCCCHHHHHHHH AALLRRAGWKVRIAWDLGGSYEEPPPTMEDFMVRDRRWCQGNMQHGRILFARGLHGVSRS HHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHH HLLIGIMSYVTSPLWLIFLILSGMQAWTLARAKAVYFQQGVPWATWPISREEEAAYLLAG HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHH TLGMLFLPKIWGLLLAIFHGPTRRAHGGGLALVGGFFLENLISALVAPIMMIRHSQFVVS HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILTGAKVDWKPQRRTADKGNLRVALASYKDVMVIGIAAVAFVLWAAPSLGVWLSPVLAGL HHHCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH LGAPFLAMALGDPDLGAALRRRGLLVIPEEITPPSVLTRMEERLAARPPTAEAPESRFSR HCCHHHHHHCCCCCHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCCCHHHCCE VILDPGTNARHRALIQATGEAPTAPVEVMERAVGLAIHLGPEALGKDERKALLECPERLE EEECCCCCHHHEEEEEECCCCCCCHHHHHHHHHCEEEEECHHHHCCHHHHHHHHHHHHHH QLHVACWARRLEDRGGVAPG HHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MLLRRRLFVLCILILTITAVQSFVHVLSGDGLSALDLALTAVFVPLAAWLAQSFCTLTAG CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALMIATQRFSWRRRRDELADIASGLVDSLPRVAIVMPVYNEDSGRVFAGVAAMRDELRAL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCEEHHHHHHHHHHHHH GVAKRFDVFILSDSTDGDNWLAEEEAWDSERHRVGDSPRLFYRRRFRNIKRKTGNIGQFV CCHHHCEEEEEECCCCCCCCCCCHHHCCCHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHH ERHGAAYGYMVVLDADSLMSGEAIWVLTRRMDAERRTALIQAPPKLIMGDTPFSRMLQFA HHHCCCEEEEEEEECCCCCCCCEEEEEEHHCCHHHHHHHHCCCCCEEECCCCHHHHHHHH GDVYGPLSSAGLAFWAGGEGNYWGHNAIIRVDAFAACCGLPALPGRAPLGGDILSHDFVE HHHCCCCCCCCEEEEECCCCCCCCCCEEEEEHHHHHHHCCCCCCCCCCCCCCHHHHHHHH AALLRRAGWKVRIAWDLGGSYEEPPPTMEDFMVRDRRWCQGNMQHGRILFARGLHGVSRS HHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHH HLLIGIMSYVTSPLWLIFLILSGMQAWTLARAKAVYFQQGVPWATWPISREEEAAYLLAG HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHH TLGMLFLPKIWGLLLAIFHGPTRRAHGGGLALVGGFFLENLISALVAPIMMIRHSQFVVS HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILTGAKVDWKPQRRTADKGNLRVALASYKDVMVIGIAAVAFVLWAAPSLGVWLSPVLAGL HHHCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH LGAPFLAMALGDPDLGAALRRRGLLVIPEEITPPSVLTRMEERLAARPPTAEAPESRFSR HCCHHHHHHCCCCCHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCCCHHHCCE VILDPGTNARHRALIQATGEAPTAPVEVMERAVGLAIHLGPEALGKDERKALLECPERLE EEECCCCCHHHEEEEEECCCCCCCHHHHHHHHHCEEEEECHHHHCCHHHHHHHHHHHHHH QLHVACWARRLEDRGGVAPG HHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA