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The map label for this gene is ybfF [C]

Identifier: 83593459

GI number: 83593459

Start: 2465829

End: 2466851

Strand: Reverse

Name: ybfF [C]

Synonym: Rru_A2124

Alternate gene names: 83593459

Gene position: 2466851-2465829 (Counterclockwise)

Preceding gene: 83593460

Following gene: 83593458

Centisome position: 56.67

GC content: 60.7

Gene sequence:

>1023_bases
ATGAAACTCATCGTTCAGATCCCCTGTTACAACGAAGAGCAGACCCTGCCGCAGACCGTCGCCGATATCCCGCGCCATAT
CCCCGGGATCGATCAGGTCGAGATCTTGATCATCGATGATGGTTCGACCGACCGCACCGTCGAGGTCGCCCGCGGTCTTG
GGGTCGACCATATCATCTGCAACCGCAACAATCGCGGGCTGGCCCGCTCGTTCCGCTCCGGTCTCGATGCCAGTCTGGCG
CTGGGCGCCGATATCGTCGTCAATACCGATGGCGACAACCAGTATTGCGGCCTGGATATCCCCAAGCTGATCCAGCCGAT
CGTCGACGGCCGGGCCGATATCGTCGTCGGCGATCGGCGGACCGATCAGCAGGCGCATTTCTCCTGGGGCAAGAAGCAGC
TTCAACGCCTGGGAAGCGCGGTGGTGCGTGGGCTTTCGGAACTTGATATTCCCGACGCGGTCAGCGGTTTTCGGGCGATT
TCCCGCGATGCGGCTTTGGCGATCAATATCATCTCGCCCTTCAGCTACACGGTGGAAATGCTGATCCAGGCCGGCAAGAA
GCATATGGCGGTGGTGTCGGTGCCGGTGCGCACCAACCCCAAAACCCGGGACTCCCGGCTGTTTCGCAGCATCCCCAAGT
TCATCGAGCGCTCGGTGACGACGATGATCCGCATGTATCTGATGTATCAGCCGCTGCGGGTTTTCCTGGTCCTGGGATTG
ATCTTGTCGACGATCGGCATCATCCCCATCCTGCGCTGGTTCCTGTTCTATCTGGACGGCGCGGGCGCGGGCAATCTTCA
CTCGCTGATCCTGGGCGCCACCTTTCTGATCATCGGCTTTTTGACCTTCACCATCGCTTTGGTCGCCGATCTGATCAATT
TCAATCGCCACCTGATCGAGATGTCGCTTGAACGCGTGCGCAGGCTGGAATTGTCAAACGGCTCGGGCCTTTACCGGCCG
AAGGATCCGCCCGCGCCGCCGCCCGCCACCTTGCCGCTGCGGCGCAGGCGATCGGCTGAATAG

Upstream 100 bases:

>100_bases
GCGCCGGCGCGCTCATCCCTAAAGCCCCCCAGGGGGGTGGCAAAGGACCTATCCGAGACCAGTCTTCCTATCCCTTCAGA
TCGGCGACAGGAGCTCTCCC

Downstream 100 bases:

>100_bases
CCCCCATAAACCCGCCGTTTCTTCGCCCCTCCGCTGAAGGAGAGCTTGATGTCGCCGGTTATCAACCATCCCGTTCTTGG
CCCGGCCGCCCCGTCGCTGG

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MKLIVQIPCYNEEQTLPQTVADIPRHIPGIDQVEILIIDDGSTDRTVEVARGLGVDHIICNRNNRGLARSFRSGLDASLA
LGADIVVNTDGDNQYCGLDIPKLIQPIVDGRADIVVGDRRTDQQAHFSWGKKQLQRLGSAVVRGLSELDIPDAVSGFRAI
SRDAALAINIISPFSYTVEMLIQAGKKHMAVVSVPVRTNPKTRDSRLFRSIPKFIERSVTTMIRMYLMYQPLRVFLVLGL
ILSTIGIIPILRWFLFYLDGAGAGNLHSLILGATFLIIGFLTFTIALVADLINFNRHLIEMSLERVRRLELSNGSGLYRP
KDPPAPPPATLPLRRRRSAE

Sequences:

>Translated_340_residues
MKLIVQIPCYNEEQTLPQTVADIPRHIPGIDQVEILIIDDGSTDRTVEVARGLGVDHIICNRNNRGLARSFRSGLDASLA
LGADIVVNTDGDNQYCGLDIPKLIQPIVDGRADIVVGDRRTDQQAHFSWGKKQLQRLGSAVVRGLSELDIPDAVSGFRAI
SRDAALAINIISPFSYTVEMLIQAGKKHMAVVSVPVRTNPKTRDSRLFRSIPKFIERSVTTMIRMYLMYQPLRVFLVLGL
ILSTIGIIPILRWFLFYLDGAGAGNLHSLILGATFLIIGFLTFTIALVADLINFNRHLIEMSLERVRRLELSNGSGLYRP
KDPPAPPPATLPLRRRRSAE
>Mature_340_residues
MKLIVQIPCYNEEQTLPQTVADIPRHIPGIDQVEILIIDDGSTDRTVEVARGLGVDHIICNRNNRGLARSFRSGLDASLA
LGADIVVNTDGDNQYCGLDIPKLIQPIVDGRADIVVGDRRTDQQAHFSWGKKQLQRLGSAVVRGLSELDIPDAVSGFRAI
SRDAALAINIISPFSYTVEMLIQAGKKHMAVVSVPVRTNPKTRDSRLFRSIPKFIERSVTTMIRMYLMYQPLRVFLVLGL
ILSTIGIIPILRWFLFYLDGAGAGNLHSLILGATFLIIGFLTFTIALVADLINFNRHLIEMSLERVRRLELSNGSGLYRP
KDPPAPPPATLPLRRRRSAE

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Drosophila melanogaster, GI24585265, Length=207, Percent_Identity=26.5700483091787, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 37739; Mature: 37739

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLIVQIPCYNEEQTLPQTVADIPRHIPGIDQVEILIIDDGSTDRTVEVARGLGVDHIIC
CEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHCCCCCEEEE
NRNNRGLARSFRSGLDASLALGADIVVNTDGDNQYCGLDIPKLIQPIVDGRADIVVGDRR
CCCCCHHHHHHHCCCCCHHCCCCEEEEECCCCCCEECCCHHHHHHHHHCCCCEEEECCCC
TDQQAHFSWGKKQLQRLGSAVVRGLSELDIPDAVSGFRAISRDAALAINIISPFSYTVEM
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEECCCHHHHHHH
LIQAGKKHMAVVSVPVRTNPKTRDSRLFRSIPKFIERSVTTMIRMYLMYQPLRVFLVLGL
HHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILSTIGIIPILRWFLFYLDGAGAGNLHSLILGATFLIIGFLTFTIALVADLINFNRHLIE
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MSLERVRRLELSNGSGLYRPKDPPAPPPATLPLRRRRSAE
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCC
>Mature Secondary Structure
MKLIVQIPCYNEEQTLPQTVADIPRHIPGIDQVEILIIDDGSTDRTVEVARGLGVDHIIC
CEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHCCCCCEEEE
NRNNRGLARSFRSGLDASLALGADIVVNTDGDNQYCGLDIPKLIQPIVDGRADIVVGDRR
CCCCCHHHHHHHCCCCCHHCCCCEEEEECCCCCCEECCCHHHHHHHHHCCCCEEEECCCC
TDQQAHFSWGKKQLQRLGSAVVRGLSELDIPDAVSGFRAISRDAALAINIISPFSYTVEM
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEECCCHHHHHHH
LIQAGKKHMAVVSVPVRTNPKTRDSRLFRSIPKFIERSVTTMIRMYLMYQPLRVFLVLGL
HHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILSTIGIIPILRWFLFYLDGAGAGNLHSLILGATFLIIGFLTFTIALVADLINFNRHLIE
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MSLERVRRLELSNGSGLYRPKDPPAPPPATLPLRRRRSAE
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]