| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83593440
Identifier: 83593440
GI number: 83593440
Start: 2439742
End: 2440680
Strand: Reverse
Name: 83593440
Synonym: Rru_A2105
Alternate gene names: NA
Gene position: 2440680-2439742 (Counterclockwise)
Preceding gene: 83593441
Following gene: 83593439
Centisome position: 56.07
GC content: 66.13
Gene sequence:
>939_bases GTGAGTCTTATCGCCTTTCTCGGCGCCGTCGAGTCCGGACTGATTTTCGGTCTTGTCGCGCTGGGCGTTTTCCTTTCTTT CCGCATCCTCGACTTCCCGGACCTGACGGTGGACGGCAGTTTCCCCTTGGGCGGCGCCGTTTCGGCCACTTTGATCGTTT CGGGCTGGGACCCCTTCCTGGCCACGGCGATCGCCATCGTCGCCGGGGCGATGGCCGGGGCGGTCACCGCTCTTCTTAAT GTCAAGCTGCGGATCTTGCATTTGCTGGCCTCGATCCTGACGATGATCGCCCTTTATTCGGTCAATCTGCGGATCATGGG GCGGCCCAATGTCGCCTTGCTGATGGAGCCGACGGTCTTCTCGCTTGTCGAGGCGCCGGGCATGCCGTCCCGGTCCTGGA TGATTCCGGCCGTTCTGCTGGTGGTCATCGTCCTCGCCCTGATCGCCTTCAACCTGTTCATGGCCTCGCGCGCCGGTCTG GCCATGCGCGCCACCGGGGCCAATGCCCGCATGGCCGGAGCGCAAGGGGTGTCGACGGCTGGCGCCATCGTGCTTGGCAT GGCGATGAGCAATGGTCTGGTCGCCCTGGCCGGGGCGCTGTTCGCCCAATCCCAGGGCGGGGCGGACGTGACCATGGGCG TCGGGGTGATCGTCGTCGGTCTGGCCTCGGTGATCGGCGGCGAGGCGGTGATGCCGACGCGCACGGTGCTGCTGGCCTCG ATCGCCTGCGTCATCGGCGCCATCATGTATCGTCTGGCCGTGGCCCTGGCCTTGAACGCCGATTCCATCGGGCTGCAGGC CCAGGATCTCAATTTAATCACCGCCGTGCTGGTGGCGGTGGCCATGGTGCTGCCCGGGTCGCGCGCCTCGTTGCGCCGCA ACTTCCGCCGGGTGCTTGGTCTTGGCGACGGCAATGGTGGCGGAGGAGCGCGGCCATGA
Upstream 100 bases:
>100_bases GTCTTTACCGGCCATGATCCCCCGTACCGCCGTTTGATCCGGGCGGGTCGCCGTTCCTTTTGGCAAAAGCGGCCCCTCTG GTCCTTGGGAGAGTCCCCCG
Downstream 100 bases:
>100_bases TCATCGCCGATAATCTGCATGTGGTGTTCAACGCCGGAACGCCCCTGGAAAATCCCGCCCTGCGCGGCCTTACCCTGGAT ATCCCCGAAGGCCAGTGGGT
Product: inner-membrane translocator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 312; Mature: 311
Protein sequence:
>312_residues MSLIAFLGAVESGLIFGLVALGVFLSFRILDFPDLTVDGSFPLGGAVSATLIVSGWDPFLATAIAIVAGAMAGAVTALLN VKLRILHLLASILTMIALYSVNLRIMGRPNVALLMEPTVFSLVEAPGMPSRSWMIPAVLLVVIVLALIAFNLFMASRAGL AMRATGANARMAGAQGVSTAGAIVLGMAMSNGLVALAGALFAQSQGGADVTMGVGVIVVGLASVIGGEAVMPTRTVLLAS IACVIGAIMYRLAVALALNADSIGLQAQDLNLITAVLVAVAMVLPGSRASLRRNFRRVLGLGDGNGGGGARP
Sequences:
>Translated_312_residues MSLIAFLGAVESGLIFGLVALGVFLSFRILDFPDLTVDGSFPLGGAVSATLIVSGWDPFLATAIAIVAGAMAGAVTALLN VKLRILHLLASILTMIALYSVNLRIMGRPNVALLMEPTVFSLVEAPGMPSRSWMIPAVLLVVIVLALIAFNLFMASRAGL AMRATGANARMAGAQGVSTAGAIVLGMAMSNGLVALAGALFAQSQGGADVTMGVGVIVVGLASVIGGEAVMPTRTVLLAS IACVIGAIMYRLAVALALNADSIGLQAQDLNLITAVLVAVAMVLPGSRASLRRNFRRVLGLGDGNGGGGARP >Mature_311_residues SLIAFLGAVESGLIFGLVALGVFLSFRILDFPDLTVDGSFPLGGAVSATLIVSGWDPFLATAIAIVAGAMAGAVTALLNV KLRILHLLASILTMIALYSVNLRIMGRPNVALLMEPTVFSLVEAPGMPSRSWMIPAVLLVVIVLALIAFNLFMASRAGLA MRATGANARMAGAQGVSTAGAIVLGMAMSNGLVALAGALFAQSQGGADVTMGVGVIVVGLASVIGGEAVMPTRTVLLASI ACVIGAIMYRLAVALALNADSIGLQAQDLNLITAVLVAVAMVLPGSRASLRRNFRRVLGLGDGNGGGGARP
Specific function: Unknown
COG id: COG4120
COG function: function code R; ABC-type uncharacterized transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 [H]
Pfam domain/function: PF02653 BPD_transp_2 [H]
EC number: NA
Molecular weight: Translated: 31592; Mature: 31461
Theoretical pI: Translated: 11.06; Mature: 11.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLIAFLGAVESGLIFGLVALGVFLSFRILDFPDLTVDGSFPLGGAVSATLIVSGWDPFL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCEEEEEEECCCHHH ATAIAIVAGAMAGAVTALLNVKLRILHLLASILTMIALYSVNLRIMGRPNVALLMEPTVF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCEEEEECCHHH SLVEAPGMPSRSWMIPAVLLVVIVLALIAFNLFMASRAGLAMRATGANARMAGAQGVSTA HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHH GAIVLGMAMSNGLVALAGALFAQSQGGADVTMGVGVIVVGLASVIGGEAVMPTRTVLLAS HHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH IACVIGAIMYRLAVALALNADSIGLQAQDLNLITAVLVAVAMVLPGSRASLRRNFRRVLG HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC LGDGNGGGGARP CCCCCCCCCCCC >Mature Secondary Structure SLIAFLGAVESGLIFGLVALGVFLSFRILDFPDLTVDGSFPLGGAVSATLIVSGWDPFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCEEEEEEECCCHHH ATAIAIVAGAMAGAVTALLNVKLRILHLLASILTMIALYSVNLRIMGRPNVALLMEPTVF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCEEEEECCHHH SLVEAPGMPSRSWMIPAVLLVVIVLALIAFNLFMASRAGLAMRATGANARMAGAQGVSTA HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHH GAIVLGMAMSNGLVALAGALFAQSQGGADVTMGVGVIVVGLASVIGGEAVMPTRTVLLAS HHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH IACVIGAIMYRLAVALALNADSIGLQAQDLNLITAVLVAVAMVLPGSRASLRRNFRRVLG HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC LGDGNGGGGARP CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]