| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83593428
Identifier: 83593428
GI number: 83593428
Start: 2420215
End: 2420973
Strand: Direct
Name: 83593428
Synonym: Rru_A2093
Alternate gene names: NA
Gene position: 2420215-2420973 (Clockwise)
Preceding gene: 83593427
Following gene: 83593442
Centisome position: 55.6
GC content: 53.36
Gene sequence:
>759_bases ATGACTGCGCCCATGAACGTGATTGACGATTACTATGTTTCTCTGGGTAAAATTGGAATTTTGAATTACAGAACCATGGA TGAAAGCGGAGAAAACGCGTTTCTTCGCAAATATCTTCCTTCGTTATCCTCGCCAACCATCCTTGATGTCGGCGCCAATA TAGGCGGCTATTCCAAGGCCATTCTCAGGGAATCTCCCTCGGCCCGGGTTTACGCCTTCGAACCCCACCCGATCACCTTT GGAAACCTTACGAAAGACACCGCGGAAGACCGCTTCCACGCCCTGAATATCGGCATTGGCGCCAAAGAGGAAACGCTGGA CTTCTATGATTACCGCGACGAGGACGGCAGTTCCCACGCCTCGCTCTACAAGGAGGTGATCGAAGACATCCATCACCGCC CGTCAACCAGCCATCGCGTTTCCATCCGTCGCCTGGATGATGTCTGCGCCGAGCTTGGCCTGCCTCACATCGCGCTTTTG AAGATCGACACCGAGGGGCACGAACTGGCGGCCCTTCAGGGGGCCGAACGCCTGATCCGTTCCGGGGCGATCGATGTCAT TCAGTTCGAATTCAACGAGATGAACGTCATTTCGCGCTGCTTCTTCAAGGATTTCTGGGATTTCCTGCCCGATTACCGCT TCTTCCGGCTGCTGCCCCACGGCTCGATCGAGATAAAGACCTATATCCCCTCGTTCTGCGAAATCTTCGCCTTTCAAAAC ATCGTCTGCGTCAAAAAAGACCTGCCCGAGTTTTTCTAA
Upstream 100 bases:
>100_bases TTCTCTTTCGGCGAGAGAGGCTTGGCTTTCTTCGCCCAGAGCGCCCCCTCCGACAGAGTGGGGAGTGAGAGATCGGCTCA TTTTCCAGAATGGAAATCCC
Downstream 100 bases:
>100_bases AAAAGCCGGCTTATTCCGCCGGCTTGCCCGCGCCCTCGGGGGTTTCGGCCAGGGCGCGGTCAAGGGCTTGGCCCACGGCG CCGGCCGAGCGGGTGAAGGG
Product: methyltransferase FkbM
Products: NA
Alternate protein names: Methyltransferase FkbM Family; Methyltransferase FkbM; SAM-Dependent Methyltransferase; Nodulation Protein NoeI- Methyltransferase
Number of amino acids: Translated: 252; Mature: 251
Protein sequence:
>252_residues MTAPMNVIDDYYVSLGKIGILNYRTMDESGENAFLRKYLPSLSSPTILDVGANIGGYSKAILRESPSARVYAFEPHPITF GNLTKDTAEDRFHALNIGIGAKEETLDFYDYRDEDGSSHASLYKEVIEDIHHRPSTSHRVSIRRLDDVCAELGLPHIALL KIDTEGHELAALQGAERLIRSGAIDVIQFEFNEMNVISRCFFKDFWDFLPDYRFFRLLPHGSIEIKTYIPSFCEIFAFQN IVCVKKDLPEFF
Sequences:
>Translated_252_residues MTAPMNVIDDYYVSLGKIGILNYRTMDESGENAFLRKYLPSLSSPTILDVGANIGGYSKAILRESPSARVYAFEPHPITF GNLTKDTAEDRFHALNIGIGAKEETLDFYDYRDEDGSSHASLYKEVIEDIHHRPSTSHRVSIRRLDDVCAELGLPHIALL KIDTEGHELAALQGAERLIRSGAIDVIQFEFNEMNVISRCFFKDFWDFLPDYRFFRLLPHGSIEIKTYIPSFCEIFAFQN IVCVKKDLPEFF >Mature_251_residues TAPMNVIDDYYVSLGKIGILNYRTMDESGENAFLRKYLPSLSSPTILDVGANIGGYSKAILRESPSARVYAFEPHPITFG NLTKDTAEDRFHALNIGIGAKEETLDFYDYRDEDGSSHASLYKEVIEDIHHRPSTSHRVSIRRLDDVCAELGLPHIALLK IDTEGHELAALQGAERLIRSGAIDVIQFEFNEMNVISRCFFKDFWDFLPDYRFFRLLPHGSIEIKTYIPSFCEIFAFQNI VCVKKDLPEFF
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28728; Mature: 28597
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPMNVIDDYYVSLGKIGILNYRTMDESGENAFLRKYLPSLSSPTILDVGANIGGYSKA CCCCHHHHHHHHHHHCCEEEEEEEECCCCCCHHHHHHHCCCCCCCEEEEECCCCCCHHHH ILRESPSARVYAFEPHPITFGNLTKDTAEDRFHALNIGIGAKEETLDFYDYRDEDGSSHA HHHCCCCCEEEEECCCCEEECCCCCHHHHHHEEEEEECCCCCHHCCHHHCCCCCCCCHHH SLYKEVIEDIHHRPSTSHRVSIRRLDDVCAELGLPHIALLKIDTEGHELAALQGAERLIR HHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHH SGAIDVIQFEFNEMNVISRCFFKDFWDFLPDYRFFRLLPHGSIEIKTYIPSFCEIFAFQN CCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEHHHHHHHHHHHCC IVCVKKDLPEFF EEEEHHCCCCCC >Mature Secondary Structure TAPMNVIDDYYVSLGKIGILNYRTMDESGENAFLRKYLPSLSSPTILDVGANIGGYSKA CCCHHHHHHHHHHHCCEEEEEEEECCCCCCHHHHHHHCCCCCCCEEEEECCCCCCHHHH ILRESPSARVYAFEPHPITFGNLTKDTAEDRFHALNIGIGAKEETLDFYDYRDEDGSSHA HHHCCCCCEEEEECCCCEEECCCCCHHHHHHEEEEEECCCCCHHCCHHHCCCCCCCCHHH SLYKEVIEDIHHRPSTSHRVSIRRLDDVCAELGLPHIALLKIDTEGHELAALQGAERLIR HHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHH SGAIDVIQFEFNEMNVISRCFFKDFWDFLPDYRFFRLLPHGSIEIKTYIPSFCEIFAFQN CCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEHHHHHHHHHHHCC IVCVKKDLPEFF EEEEHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA