| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83593378
Identifier: 83593378
GI number: 83593378
Start: 2363022
End: 2364065
Strand: Reverse
Name: 83593378
Synonym: Rru_A2043
Alternate gene names: NA
Gene position: 2364065-2363022 (Counterclockwise)
Preceding gene: 83593379
Following gene: 83593376
Centisome position: 54.31
GC content: 62.74
Gene sequence:
>1044_bases ATGACATCGATTGGCGAAGGCTATGTCTGGCCCAATCTGACCATATATTCGGATGGAGTGCGCACGGTTCTTCTCTCGCG CCCCTCCTCGGACCCCAAAGCCAAGCCCTACCGATATTTCGGCGCGCCGCCGACGGTCGTGTCCTCGACGCTTTTCGAAA GCGCGGTTGATACCTTTCTATCGCGCATTATCGGGCGGTTGCGCGAGCAGGGGGTCGGCGAGACCAATCTTGATCGACTG TGGAGCGATCTGCTGATCGAGCGATCCGACCCGCATCTGGCGATCCGCCGCAAGCTGGAAGCCCTGCTCGGCCTGGATCC CGGCGAGGCGGAGGAGGGGGCTTTGGCGGGCGTGCTTGCCGATGGCAAGGACCTGGGCCAAGCCGCCATGGAGGAAATGG CCGCTGAAAGCGCTCAGGCCAACCAGGCGGTGATGTCGGGTGAAGCCCTGGCCGATCTGGCGAAAACCCATGGATTCGAA GCCTCTGTGAAGGATTCCGTGCGTTTGGGAGCGTCCTGGGGCCGCTTGGCCGATGCCGCCAAGCCGGCGTGGCGGCTGGG GGCTGAAATGGCCAAGGCGCTGCGCGATCAGGAGGGGTTGGGCGGGGCGCCCGTGGGAACGACGCGGCTGGCCGAGATGA TCGGGACCAGGGCGACGCATCTGGCCGACACCGCCGCCCTCAGCCTTCGCTTTTCTTTCTGTCTAGAGGCGGGGGAGGGG CCTTCGCAGGTGGTCTTGCGCTCCCGCTGGCCCGCCAATCGACGCTTCCATGCCGCCCGTCTTCTCGCCGATCGCCTGTT TTCCCCCGGCGAGCGTCTTCATCCGGCAACCGAAGCCGGCACCTATCGTCAAAAGGTTCAAAGGGCTTTCGCCGCCGAGT TCCTGGCGCCCTTTGAGGGCGTCGAGGCCATGATGGCCGGGGATTTTTCGCCCGAGAGACAGGAGGATGTGGCGGAGCAT TTCAATGTTTCGGCGATGACGATCAATGCCATCTTAAAAAACAACAAAAGGCTTGTTCCCGATGAGTTCGAACAGGATTT CTAG
Upstream 100 bases:
>100_bases TGTCTCGGGATATCATGTGGCGGAATGGTTGGCGTGGAATTGGTGGCGACTGCGCCATGAGCCCCGATCAAACGCCGAGG GCTGGTCCTTCGCCCATGGG
Downstream 100 bases:
>100_bases GTCTATGAGGGGACCTTACAGATAAGGCGGCGTGCAGGCCGAGACGATGACGCAAGGGGCATCGAAGGGGTTGCGGAAGC GGTGGGGGCGTTTGCTGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MTSIGEGYVWPNLTIYSDGVRTVLLSRPSSDPKAKPYRYFGAPPTVVSSTLFESAVDTFLSRIIGRLREQGVGETNLDRL WSDLLIERSDPHLAIRRKLEALLGLDPGEAEEGALAGVLADGKDLGQAAMEEMAAESAQANQAVMSGEALADLAKTHGFE ASVKDSVRLGASWGRLADAAKPAWRLGAEMAKALRDQEGLGGAPVGTTRLAEMIGTRATHLADTAALSLRFSFCLEAGEG PSQVVLRSRWPANRRFHAARLLADRLFSPGERLHPATEAGTYRQKVQRAFAAEFLAPFEGVEAMMAGDFSPERQEDVAEH FNVSAMTINAILKNNKRLVPDEFEQDF
Sequences:
>Translated_347_residues MTSIGEGYVWPNLTIYSDGVRTVLLSRPSSDPKAKPYRYFGAPPTVVSSTLFESAVDTFLSRIIGRLREQGVGETNLDRL WSDLLIERSDPHLAIRRKLEALLGLDPGEAEEGALAGVLADGKDLGQAAMEEMAAESAQANQAVMSGEALADLAKTHGFE ASVKDSVRLGASWGRLADAAKPAWRLGAEMAKALRDQEGLGGAPVGTTRLAEMIGTRATHLADTAALSLRFSFCLEAGEG PSQVVLRSRWPANRRFHAARLLADRLFSPGERLHPATEAGTYRQKVQRAFAAEFLAPFEGVEAMMAGDFSPERQEDVAEH FNVSAMTINAILKNNKRLVPDEFEQDF >Mature_346_residues TSIGEGYVWPNLTIYSDGVRTVLLSRPSSDPKAKPYRYFGAPPTVVSSTLFESAVDTFLSRIIGRLREQGVGETNLDRLW SDLLIERSDPHLAIRRKLEALLGLDPGEAEEGALAGVLADGKDLGQAAMEEMAAESAQANQAVMSGEALADLAKTHGFEA SVKDSVRLGASWGRLADAAKPAWRLGAEMAKALRDQEGLGGAPVGTTRLAEMIGTRATHLADTAALSLRFSFCLEAGEGP SQVVLRSRWPANRRFHAARLLADRLFSPGERLHPATEAGTYRQKVQRAFAAEFLAPFEGVEAMMAGDFSPERQEDVAEHF NVSAMTINAILKNNKRLVPDEFEQDF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37670; Mature: 37539
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSIGEGYVWPNLTIYSDGVRTVLLSRPSSDPKAKPYRYFGAPPTVVSSTLFESAVDTFL CCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHH SRIIGRLREQGVGETNLDRLWSDLLIERSDPHLAIRRKLEALLGLDPGEAEEGALAGVLA HHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEC DGKDLGQAAMEEMAAESAQANQAVMSGEALADLAKTHGFEASVKDSVRLGASWGRLADAA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHC KPAWRLGAEMAKALRDQEGLGGAPVGTTRLAEMIGTRATHLADTAALSLRFSFCLEAGEG CHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC PSQVVLRSRWPANRRFHAARLLADRLFSPGERLHPATEAGTYRQKVQRAFAAEFLAPFEG HHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH VEAMMAGDFSPERQEDVAEHFNVSAMTINAILKNNKRLVPDEFEQDF HHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHCCCC >Mature Secondary Structure TSIGEGYVWPNLTIYSDGVRTVLLSRPSSDPKAKPYRYFGAPPTVVSSTLFESAVDTFL CCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHH SRIIGRLREQGVGETNLDRLWSDLLIERSDPHLAIRRKLEALLGLDPGEAEEGALAGVLA HHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEC DGKDLGQAAMEEMAAESAQANQAVMSGEALADLAKTHGFEASVKDSVRLGASWGRLADAA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHC KPAWRLGAEMAKALRDQEGLGGAPVGTTRLAEMIGTRATHLADTAALSLRFSFCLEAGEG CHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC PSQVVLRSRWPANRRFHAARLLADRLFSPGERLHPATEAGTYRQKVQRAFAAEFLAPFEG HHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH VEAMMAGDFSPERQEDVAEHFNVSAMTINAILKNNKRLVPDEFEQDF HHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA