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The map label for this gene is 83593360

Identifier: 83593360

GI number: 83593360

Start: 2339030

End: 2339728

Strand: Reverse

Name: 83593360

Synonym: Rru_A2025

Alternate gene names: NA

Gene position: 2339728-2339030 (Counterclockwise)

Preceding gene: 83593361

Following gene: 83593359

Centisome position: 53.75

GC content: 66.38

Gene sequence:

>699_bases
ATGAAGCGCTATCCAGGCGAGGCGGTGCCGGGGCTTATTCCCCAAGACAGCTTGTTCGCCCGCCTGCGCGGCGCCTGCGC
GACGGAGTGGCAGGCCTATACCGGCCACGCCTTCGTGCGCCAGATGGGCGAGGGGTCGCTGCGCGAAGAGTGTTTTCGCC
ATTATCTGGGTCAGGACTATCTGTTCCTGATCCAGTTCGCCCGCGCTTACGCCCTCGCCGCCTATAAGGCCGAGGCGCTG
GCCGATCTGCGGACGGCCGGCCTGGGAATGGCCGCCATCCTTGATGAAATGCGCCTGCATGTGTCGTTGTGCCAGCGCTG
GGGGCTGGGCCCGGCCGATCTGGAAGCCCTGCCCGAGGCGCGGGCGACGATCGCCTATACCCGCTATGTGCTCGACAAGG
GGCTGGCGGGCGACCTGCTTGATCTCCATGTGGCGTTGAGCCCCTGTGTGGTCGGCTATGCCGAGATCGCCCTGACCCTT
CGCCAGAGTCTGAGCGAGGATCACCCCTACGCCGAATGGATCGGCGAATATGCCGGCGAGGCTTATCAGGGCGTCGCCCG
TAGCGCGGTGGCAACCCTTGATCGCCTGCTGGTCGAGCGCGGCGGCATCGGCCGCATGCCCGCCCTGATCGCCACCTTCC
GTCAGGCGACGCGCCTGGAAGCCGATTTCTGGCAGATGGGCCTGACTTTGAGCGCCTGA

Upstream 100 bases:

>100_bases
CGCGTCTGGGCTGCCAGCTGATCATGACCGAAGAGCTTGACGGTCTGGTGCTGCGCCTGCCGACCGAAACCCGCGATAGC
CGGGGCTAGGGACGCGGCCG

Downstream 100 bases:

>100_bases
CCCGTGACGAAGGGCCGCCGGTCGTCCGGCAAAACGCCCGCAAAGGATCAAGACCATGTCCCAGACGCCCCTTTCGCCCC
CGCCGGTCGGCGGCCGTGTG

Product: TenA family transcription regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MKRYPGEAVPGLIPQDSLFARLRGACATEWQAYTGHAFVRQMGEGSLREECFRHYLGQDYLFLIQFARAYALAAYKAEAL
ADLRTAGLGMAAILDEMRLHVSLCQRWGLGPADLEALPEARATIAYTRYVLDKGLAGDLLDLHVALSPCVVGYAEIALTL
RQSLSEDHPYAEWIGEYAGEAYQGVARSAVATLDRLLVERGGIGRMPALIATFRQATRLEADFWQMGLTLSA

Sequences:

>Translated_232_residues
MKRYPGEAVPGLIPQDSLFARLRGACATEWQAYTGHAFVRQMGEGSLREECFRHYLGQDYLFLIQFARAYALAAYKAEAL
ADLRTAGLGMAAILDEMRLHVSLCQRWGLGPADLEALPEARATIAYTRYVLDKGLAGDLLDLHVALSPCVVGYAEIALTL
RQSLSEDHPYAEWIGEYAGEAYQGVARSAVATLDRLLVERGGIGRMPALIATFRQATRLEADFWQMGLTLSA
>Mature_232_residues
MKRYPGEAVPGLIPQDSLFARLRGACATEWQAYTGHAFVRQMGEGSLREECFRHYLGQDYLFLIQFARAYALAAYKAEAL
ADLRTAGLGMAAILDEMRLHVSLCQRWGLGPADLEALPEARATIAYTRYVLDKGLAGDLLDLHVALSPCVVGYAEIALTL
RQSLSEDHPYAEWIGEYAGEAYQGVARSAVATLDRLLVERGGIGRMPALIATFRQATRLEADFWQMGLTLSA

Specific function: Unknown

COG id: COG0819

COG function: function code K; Putative transcription activator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thiaminase-2 family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6324517, Length=203, Percent_Identity=27.0935960591133, Blast_Score=94, Evalue=2e-20,
Organism=Saccharomyces cerevisiae, GI6324997, Length=234, Percent_Identity=26.0683760683761, Blast_Score=93, Evalue=4e-20,
Organism=Saccharomyces cerevisiae, GI6325378, Length=231, Percent_Identity=27.2727272727273, Blast_Score=91, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016084
- InterPro:   IPR004305 [H]

Pfam domain/function: PF03070 TENA_THI-4 [H]

EC number: NA

Molecular weight: Translated: 25546; Mature: 25546

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRYPGEAVPGLIPQDSLFARLRGACATEWQAYTGHAFVRQMGEGSLREECFRHYLGQDY
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHH
LFLIQFARAYALAAYKAEALADLRTAGLGMAAILDEMRLHVSLCQRWGLGPADLEALPEA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
RATIAYTRYVLDKGLAGDLLDLHVALSPCVVGYAEIALTLRQSLSEDHPYAEWIGEYAGE
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
AYQGVARSAVATLDRLLVERGGIGRMPALIATFRQATRLEADFWQMGLTLSA
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKRYPGEAVPGLIPQDSLFARLRGACATEWQAYTGHAFVRQMGEGSLREECFRHYLGQDY
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHH
LFLIQFARAYALAAYKAEALADLRTAGLGMAAILDEMRLHVSLCQRWGLGPADLEALPEA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
RATIAYTRYVLDKGLAGDLLDLHVALSPCVVGYAEIALTLRQSLSEDHPYAEWIGEYAGE
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
AYQGVARSAVATLDRLLVERGGIGRMPALIATFRQATRLEADFWQMGLTLSA
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]