| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83593353
Identifier: 83593353
GI number: 83593353
Start: 2332122
End: 2332511
Strand: Direct
Name: 83593353
Synonym: Rru_A2018
Alternate gene names: NA
Gene position: 2332122-2332511 (Clockwise)
Preceding gene: 83593351
Following gene: 83593357
Centisome position: 53.58
GC content: 68.46
Gene sequence:
>390_bases ATGAAAACCTTTTATCTGGCCGTTATCGACAAGGACCCCGAGTCCGATTACGGCGTGAGCTTCCCCGACTTTCCCGGCTG CGTCAGCGGTGGGGAAACCGTGGCCGAGGCGATCACCATGGCCGAGGACGCTTTGGCCCTGCACCTGGAAGGACTGGCCG AGGCTGGCCAACCGATCGCCGACCCGACGCCGGCGGATGCGGTGGTTGACGCCCCCGAGGTGAACCGCGTGGCTTTGGTG ATGATCCCGGCCGATCGCCCGGGGCGCATGGTGCGGGTCAATGTCACGCTGGAAGAAGGGCTGCTGGCGCGCATCGATCG CACGGCCGGCCCGCGCGGCCGCAGCGCCTTCCTCGCCCAGGCGGCGGATCGCGCGCTGCGCCAGGGGTAA
Upstream 100 bases:
>100_bases CAGGTGGTAACTCCCCCACCCTAAACTCGCCCTCTCCATCGGTGTCCTTCGAAGTATCGAAGCCATTACCGGCCTGAAGC TGCGTTAAGGGAGACGTGCC
Downstream 100 bases:
>100_bases CGTTTCAGCGTCGAAGCGGTTGAAACGACTCGAACTTTATTCCTACGGGTAGCTTTCCGACATGCCATTGCGGGAGGGAG CACGGCATGTCGGATAGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 129; Mature: 129
Protein sequence:
>129_residues MKTFYLAVIDKDPESDYGVSFPDFPGCVSGGETVAEAITMAEDALALHLEGLAEAGQPIADPTPADAVVDAPEVNRVALV MIPADRPGRMVRVNVTLEEGLLARIDRTAGPRGRSAFLAQAADRALRQG
Sequences:
>Translated_129_residues MKTFYLAVIDKDPESDYGVSFPDFPGCVSGGETVAEAITMAEDALALHLEGLAEAGQPIADPTPADAVVDAPEVNRVALV MIPADRPGRMVRVNVTLEEGLLARIDRTAGPRGRSAFLAQAADRALRQG >Mature_129_residues MKTFYLAVIDKDPESDYGVSFPDFPGCVSGGETVAEAITMAEDALALHLEGLAEAGQPIADPTPADAVVDAPEVNRVALV MIPADRPGRMVRVNVTLEEGLLARIDRTAGPRGRSAFLAQAADRALRQG
Specific function: Unknown
COG id: COG1598
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13604; Mature: 13604
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTFYLAVIDKDPESDYGVSFPDFPGCVSGGETVAEAITMAEDALALHLEGLAEAGQPIA CCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC DPTPADAVVDAPEVNRVALVMIPADRPGRMVRVNVTLEEGLLARIDRTAGPRGRSAFLAQ CCCCCCCEECCCCCCCEEEEEEECCCCCCEEEEEEEECCCHHHHHHCCCCCCCCHHHHHH AADRALRQG HHHHHHHCC >Mature Secondary Structure MKTFYLAVIDKDPESDYGVSFPDFPGCVSGGETVAEAITMAEDALALHLEGLAEAGQPIA CCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC DPTPADAVVDAPEVNRVALVMIPADRPGRMVRVNVTLEEGLLARIDRTAGPRGRSAFLAQ CCCCCCCEECCCCCCCEEEEEEECCCCCCEEEEEEEECCCHHHHHHCCCCCCCCHHHHHH AADRALRQG HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA